Porphyromonas crevioricanis: NCTC12858_00008
Help
Entry
NCTC12858_00008 CDS
T05510
Symbol
gyrA_1
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pcre
Porphyromonas crevioricanis
Brite
KEGG Orthology (KO) [BR:
pcre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcre03032
]
NCTC12858_00008 (gyrA_1)
03400 DNA repair and recombination proteins [BR:
pcre03400
]
NCTC12858_00008 (gyrA_1)
Enzymes [BR:
pcre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NCTC12858_00008 (gyrA_1)
DNA replication proteins [BR:
pcre03032
]
Prokaryotic type
DNA Topoisomerases
NCTC12858_00008 (gyrA_1)
DNA repair and recombination proteins [BR:
pcre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCTC12858_00008 (gyrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Phage_T4_Gp30_7
Motif
Other DBs
NCBI-ProteinID:
SQH72202
UniProt:
A0A2X4SDS7
LinkDB
All DBs
Position
1:complement(8542..11118)
Genome browser
AA seq
858 aa
AA seq
DB search
MVLVCNMIDSEDKIINIDIDKEMRTAYIDYAMSVIVSRALPDVRDGFKPVHRRVLYAMND
TGNVHSSPHKKSAKTVGEVIAKYHPHGDSSVYFTLVRLAQPWNLRYTMVDGQGNFGSIDG
DSPAAMRYTEARLSRIAAEMLRDIDKETVDFQNNFDDTLQEPVVLPTRIPNLLVNGAAGI
AVGMATNMPPHNLGESIDGCVAYIDADGEIEISELMKYVKAPDFPTGGLIYGYAGVKEAF
ETGRGRIVIRSRCEIEQHANHERIIVTEIPYQVVKSDLVASIAQLVNEKKIDGISDIRDE
SNRQGIRVVIEIKRDANASVVLNKLYKQTALQSSFSVNNIALVNGRPMLLNLKDLIREFV
DHRHDVVTRRCIYELRKAKERAHILEGLLIAVDHIDEVIAIIRAAKDPNEAMANLIARFE
LSEIQARAIVDMRLRALTGLEREKLRNEYEEIARQIAYLEMLLGSKEERMKVVKQELLEV
REKYADDRRSEIIYASEEFNPEDFYADDEMIITLSHMGYIKRTPLTEFRTQSRGGVGAKG
SDTRSEDFVEYIYSASMHATILLFTAKGKCYWLKVYEIPEGAKNAKGRAIQNLLNIDPDD
KVTAFIRIKDLTKDEAFVNSHYLMFATKTGMVKKTLLEAYSRPRTNGVIAINLNEGDEVV
SVRLTNGRNQILIANRNGRAVRFDESTVRTVGRNSIGVRGMRLDEDGQDEVIGMIAIKHP
EEQTVLVVSEHGYGKRSSIEDYRTTNRGGKGVKTMQVTDKTGHLIDIRAVEEDNDLMIIN
KSGVAIRISVKDIAVIGRATQGVRLINLDKRGDDIASVCSVISEEEMAEAETPKGEGVTS
LSTTDADTTAEDDIIVES
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
gtggtattggtttgtaatatgatagattcagaggataagattatcaatattgatatcgac
aaagagatgcgcacggcctacatagactatgctatgtctgtgatagtgtctcgtgctttg
cctgatgtgcgcgacggattcaagcccgtgcacagacgtgtgttgtatgccatgaatgat
accggcaatgtacactcgtcaccacacaagaaaagtgcaaaaaccgtcggtgaagtgatt
gctaagtatcacccacacggggacagctcggtgtatttcactctggtgagattggcccag
ccttggaatttgcgctacacgatggtagatgggcaaggtaactttggctctatcgatggc
gactcccccgcagctatgcgttatacggaggccaggctaagtcgcatagcagccgaaatg
ctgcgtgacatagacaaagaaaccgtagacttccaaaataacttcgacgatacattgcaa
gagccggttgtcttaccgactcgtatccctaatctgcttgtcaatggagcagctggtatt
gcggtggggatggcaaccaatatgccccctcacaacttgggcgaaagtatagatggctgt
gtagcttatatcgatgccgatggcgagatagagatttctgaattgatgaagtatgtcaag
gctcccgatttcccgaccggaggactgatatacggctatgccggagtaaaggaagctttc
gagacaggacgaggacggattgttattcgctctcgttgcgagatcgagcagcatgccaat
cacgagcgtatcatagtgacagagatcccctaccaggtagtcaaatccgacttagtcgct
tcgatagctcaactggtaaacgaaaagaaaatagacggaatctcagatattcgagacgaa
tcgaaccggcagggtatacgtgttgtgatagagattaagagagatgccaatgcttctgtt
gtgctcaacaaactttacaagcagacggccctccaaagctctttcagtgtaaacaacatt
gcgctggtgaacggacgtcctatgctgttaaacctcaaagatctcattcgagaatttgtc
gatcacaggcacgatgtggtgactcgccgctgcatatatgagttgagaaaagccaaagag
cgtgcgcacatcctggaaggactgctcatcgccgtagatcacatagatgaggtaatagct
attatccgtgctgccaaggatccaaacgaagcaatggcaaacttgatcgctcgctttgag
ttgagcgaaatacaggcccgggctatcgtagatatgaggctcagagccctcactggtctg
gagcgtgaaaagctgcggaacgaatatgaagagattgccagacagattgcctacctcgag
atgctcctcggtagcaaagaagagcgaatgaaggtggtcaaacaggaactgctggaggta
cgagagaagtatgccgatgacagacgctccgagattatttacgccagtgaagaatttaac
ccagaggacttctatgccgatgatgagatgataatcacactctctcacatggggtacatc
aagcgcacgcctctcacagagttccgcactcagtcaagagggggagtaggggccaagggg
tcggatacccgaagcgaagacttcgtggaatatatctattcggcctcgatgcacgcaacg
attttgctctttacagccaaaggtaaatgctattggctcaaggtgtacgagatccctgag
ggggccaaaaatgccaagggtagagctatacagaacttgctcaacatagatcctgacgac
aaggtgactgcgttcatccgaattaaagacctgactaaagacgaggcctttgtcaattct
cattacctgatgtttgccacaaagacgggtatggtgaagaagaccttgctggaggcctat
tctcgccctcgcaccaatggagtgatcgctatcaatctcaatgagggagatgaggtcgta
agtgtgcgtttgaccaatggccgaaaccagatcctgattgccaatcgaaacggacgagct
gtgcgtttcgacgagtctacagttcgtacagtcggtcgcaactcgataggggtgcgtggt
atgcgtctggatgaggatgggcaggacgaagtgataggtatgattgccatcaaacacccc
gaggagcagactgtattggtggtgagcgaacatggctatggcaagcgatcttcgatagaa
gactatcgcacaaccaaccgaggaggtaagggtgtcaaaaccatgcaggtaacggataag
accggtcatttgatcgacattcgtgctgtagaggaggataatgatttgatgattatcaac
aaaagcggtgttgctattcgtataagtgtgaaggatatagccgtgatcggtcgtgctacg
caaggtgtaaggctgattaatttggataagcgaggtgatgatatagcttccgtctgcagt
gtcatttcggaggaggaaatggccgaagcagagactccgaaaggagaaggggtcacgagt
ctctccactactgatgcagatacaacggccgaggatgacataattgtcgaatcctga
DBGET
integrated database retrieval system
