Porphyromonas crevioricanis: NCTC12858_00033
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Entry
NCTC12858_00033 CDS
T05510
Symbol
cshA_1
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
Organism
pcre
Porphyromonas crevioricanis
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
NACHT
DUF3602
Motif
Other DBs
NCBI-ProteinID:
SQH72227
UniProt:
A0A2X4PWI9
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Position
1:40736..42139
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AA seq
467 aa
AA seq
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MRFDEFDLSDEVLDGLDAMNFFEATPIQEATIPLILEGHDLIACAQTGTGKTAAYVLPII
SELNSGKYPSDAVNAVIMAPTRELAQQIDQQIEAFSYFLSVSAVAIYGGTDGIAWEQQRK
GMEMGADVLIATPGRLISHINMKSADLSQVSFFVLDEADRMLDMGFYDDIMQVYKQLPKT
CQTLMFSATMPKKIRELAAGILKNPKQVEIAISRPPEAITQTCCICYDEQKLPILLDLFA
ATPPSRTIIFSSSKQKVKDLTQALKQRRYNATAMHSDLDQSVREQVIRDFKNRSIDILVA
TDIVARGIDVDNVTVVINYDIPRDPEDYVHRIGRTARNNESGLAITLVGESEQYEFSRIE
EFLGKKLYQLPIPTHIGATPAYEPNKLKRGRFSSGRGHGGNRVRKPDTNSARKEYKRDEK
SQARDSKRQPSEHRKANTKPSGRKDGQHLRQHNKQRLANKKQTPREQ
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgagatttgacgaattcgatttaagcgacgaagtattggacgggctggatgccatgaac
ttcttcgaagcaacccctatacaagaagcaactatcccactcatattggagggacatgat
ctgatagcttgtgcacagaccggaacaggcaaaacagcggcctatgtactaccgatcatt
agcgaactcaatagtgggaagtacccttctgatgctgtcaatgccgtgatcatggctcct
actcgggaattagctcaacagatcgatcaacaaatcgaggccttctcttacttcctctcc
gtatcggctgtagccatatatggaggtacagacggtattgcttgggagcaacaacgcaaa
gggatggagatgggagccgatgtgctgattgccactccgggaaggttgatatcacatatc
aatatgaagtcggccgatctctcccaggtatcattctttgtattggacgaggcagaccga
atgctcgacatgggtttctacgatgacatcatgcaggtttacaagcaattgcccaaaacc
tgccaaacactgatgttctcggccaccatgccaaagaaaatcagagaactggctgccgga
attctaaaaaatccgaagcaagtagagatcgctatcagccgtccgcccgaagctatcaca
cagacctgctgtatatgctatgacgaacagaaattacccattttgctcgatctgtttgct
gccacacctccctctcgcacaattatcttttccagctcaaaacagaaagtcaaagatctg
acacaagctctcaagcaaaggcgatacaatgcaacagcaatgcattcagaccttgaccaa
agtgtacgagagcaagtgatccgagactttaagaacaggagtatagacatattggtcgcc
accgacattgtggcaagaggaatagacgtggataatgtgactgtggtaatcaactatgat
atacccagagatcccgaagactatgtacaccgcatcgggcgtactgcccgaaacaatgag
tccggcttggctattacccttgttggagaaagcgagcaatatgagtttagtcgcatcgaa
gagttcttgggcaaaaagctctatcaactacccataccgacacatatcggagccacacca
gcatatgagccgaacaagctaaaaagaggacgtttctcctccgggcgtggacatggggga
aatcgggtgagaaaaccggacacaaactctgctcggaaagaatataaacgagacgaaaag
tctcaagcaagagattcgaaaagacagccttcagaacaccggaaagcgaataccaaaccc
tcagggagaaaggatgggcaacacctccgacaacacaacaaacaaaggttggccaacaag
aaacaaaccccaagagaacaataa
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