Porphyromonas crevioricanis: NCTC12858_00073
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Entry
NCTC12858_00073 CDS
T05510
Symbol
exoA
Name
(GenBank) Exodeoxyribonuclease
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pcre
Porphyromonas crevioricanis
Pathway
pcre03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC12858_00073 (exoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcre03400
]
NCTC12858_00073 (exoA)
Enzymes [BR:
pcre01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
NCTC12858_00073 (exoA)
DNA repair and recombination proteins [BR:
pcre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NCTC12858_00073 (exoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
SQH72267
UniProt:
A0A2X4PWN4
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All DBs
Position
1:87967..88728
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AA seq
253 aa
AA seq
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MKIISYNVNGLRAAVKKGLAEWLAQESPDVFCIQETKLQPDQFDPTPFVEAGYPYSYLYS
AQKKGYSGVAILSKIEPDKVQSGMGIEAYDNEGRFIRADFGDLSVISAYHPSGQSGDIRQ
AFKMQWLSDFQDYVGELRASRPKLVLCGDYNICHEAIDIHDPVRNATVSGFLPEERAWMS
QFLADGYTDSFRHLYPEAVKYSWWSYRAGARAKNKGWRIDYCMLTDNLRSELKEAEILND
AVHSDHCPVSVTL
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataatatcctacaacgtcaatggactaagggctgccgtaaaaaaggggttagcc
gaatggttagcacaagagtctccagatgtattttgcatacaagagacaaagctccaaccg
gatcaattcgacccgactccttttgtcgaagccggatacccctattcttatctctattca
gcccagaagaaaggctatagcggagtggctatcctctccaagatagagccggacaaggta
caatccggcatgggtatagaggcttatgataatgaaggacgttttatccgggccgacttc
ggcgacctcagcgttatctctgcgtatcacccctctggacaaagtggagatatacgtcag
gctttcaagatgcagtggctctcggacttccaagactatgtaggcgaacttcgtgcaagc
cggccaaagctggtactctgcggtgattacaatatttgccatgaagctatagacatacat
gacccggtgcgcaatgccacggtaagtgggtttctgcccgaagagcgtgcctggatgtct
caattcttggccgatggatacacagactcatttcgccacctctatcccgaagcagtcaaa
tattcgtggtggagctatcgagccggagcaagagcaaaaaacaaaggatggcgtattgat
tactgtatgcttaccgataaccttcgctccgaactcaaagaggccgaaatactcaacgac
gctgtacatagcgaccattgcccggtaagtgttacactttga
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