Porphyromonas crevioricanis: NCTC12858_00203
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Entry
NCTC12858_00203 CDS
T05510
Symbol
miaB_1
Name
(GenBank) (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pcre
Porphyromonas crevioricanis
Brite
KEGG Orthology (KO) [BR:
pcre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcre03016
]
NCTC12858_00203 (miaB_1)
Enzymes [BR:
pcre01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
NCTC12858_00203 (miaB_1)
Transfer RNA biogenesis [BR:
pcre03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
NCTC12858_00203 (miaB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
DUF3420
Motif
Other DBs
NCBI-ProteinID:
SQH72389
UniProt:
A0A2X4PV05
LinkDB
All DBs
Position
1:206753..208105
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AA seq
450 aa
AA seq
DB search
MSDTTRIDSTKYLYIETYGCQMNVADSEVVASIMQMAGYAQVEHPEEADAILINTCSVRD
NAEQRVIHRIEQLQALRRKLHKAIAIGVLGCMAERVQQELIEKHGVDLVAGPDSYLDLPN
LIAAVEKGEKAINVELSKQETYKDVIPLKIGGVHISGFVSIMRGCNNFCSYCIVPYTRGR
ERSREVDSILAEVRDLREKNFREVTLLGQNVNSYSYRNPQGEEIYFAGLLKLVAEEAPQM
RIRFTSPHPRDMGDDVIEVMAAYPNICRHIHLPAQSGSNKILTAMKRCYTREWYLDRVAA
IRRIMPDCAISTDLFCGFHSETEEDFQETLSLMREVGYDSAFMFKYSERPGTFAAKHLPD
DVPEEVKGRRLSEMIDLQNKLSEESNRRDIGKTFEVLIEGFSKRSREQLFGRTQQNKVVI
FDKAGHRVGQYVQVRINSASSATLLGTVIE
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataccacccgaatagactccaccaaatacctatacatcgagacttacggctgt
caaatgaatgtggccgacagcgaagttgttgcttctatcatgcagatggccggctatgct
caggtagagcacccggaagaagccgatgccatacttatcaatacctgctcggtacgagat
aacgccgaacagcgagtcattcaccgcatcgaacaactgcaagctctgcgccgaaagctg
cacaaagccattgccatcggagtgctgggatgtatggccgaacgcgtacaacaagagctc
atcgaaaagcacggagtcgatttggtggccgggccggacagttatctggacttacccaac
cttattgcagcagtcgaaaaaggagaaaaagctatcaatgtggagctatctaagcaggag
acatacaaggatgtgatccccctgaagataggtggtgtacacatctccggcttcgtatct
atcatgcgtggatgcaacaatttttgctcctattgcatcgtgccctataccagaggacga
gagcgtagtcgcgaagtagacagtatcctcgccgaagtgcgagacttgagggagaaaaac
ttccgagaagttaccctactggggcaaaatgtcaattcctactcctatcgaaacccacaa
ggagaagagatctactttgccggactactcaagctggttgccgaagaagcccctcagatg
cgtatccgcttcacctcaccccatccgagagatatgggcgatgatgtgattgaggtcatg
gcagcttatcccaatatatgcagacacatccacctaccagcacagagtgggagcaacaag
atattaacggccatgaaacgttgctacacgagagagtggtacctcgaccgcgtggccgcc
atcagacgcatcatgccggattgtgccattagtacggatctattctgtggatttcattcc
gaaacagaagaggacttccaagaaacactctctttgatgagagaagtaggctacgactca
gcatttatgttcaagtacagcgaacgtcccgggaccttcgcagccaaacacctgccggac
gatgtgccggaagaggtgaaaggtcgtcgcctgagcgaaatgatagacctgcaaaacaaa
ctaagcgaagaaagtaaccggagagacatcggaaaaacattcgaggtccttatcgaagga
tttagcaaacgtagccgggaacaactcttcggtcgcacgcagcaaaacaaggtggtcatc
ttcgacaaagccgggcatcgtgtgggccaatatgtacaagtgcgtatcaacagtgccagt
agtgcaaccctattggggacggtgatcgagtga
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