Porphyromonas crevioricanis: NCTC12858_00343
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Entry
NCTC12858_00343 CDS
T05510
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pcre
Porphyromonas crevioricanis
Brite
KEGG Orthology (KO) [BR:
pcre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcre03009
]
NCTC12858_00343 (rimO)
Enzymes [BR:
pcre01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NCTC12858_00343 (rimO)
Ribosome biogenesis [BR:
pcre03009
]
Prokaryotic type
ribosomal protein modification factors
NCTC12858_00343 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
SQH72520
UniProt:
A0A2X4PIL7
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All DBs
Position
1:complement(375363..376670)
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AA seq
435 aa
AA seq
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MKRNKVDVITLGCSKNLIDSERLMRQFALNGYRVSHDTAQPDGEIVVINTCGFIDAAKEE
SIETILTVLDLKKRGRVGAVYVMGCLSERYRDELGQELDGVDRWYGKFDWPQLLRDIGKA
YYDREATTRMLTTPSHYAYLKIAEGCDRSCSYCIIPKITGRYRSRPMQEILQEAERLSLA
GVKELQLIAQDLTYYGMDLDGHRALLPELLRQLVCIDEIEWIRLHYAYPHHFPYELLDVI
REEPKICNYLDIALQHISDRMLKQMRRNISSADTYNLLRKIRAEVPGIHLRTTLMVGHPG
ETEEDFQELLQFVRDIRFERMGAFVYSHEEGTWCDQHYQDDVPNEVKIDRLDRLMALQEE
ISLPIQRSKIDTSLKVIVDRKEDGYAVGRSQYDSPDVDPEVWITEYPGKNLEIGQFVTVS
VTDATAFELYAEPIE
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgaaacaaagtagacgtaatcaccctcggatgctccaaaaatttgatcgattca
gagcgtctgatgcgccagtttgcattgaatggttatcgtgtgtctcacgatacggcacag
cctgatggagaaattgttgtgatcaacacttgtggtttcatcgatgctgccaaggaagaa
tccattgagacgattctcacggttttggatctgaagaagcgaggtcgtgtcggagcagtc
tatgtaatgggatgtctgagcgaacgctaccgtgatgaattggggcaagagctagatggc
gtagatcgctggtatgggaaattcgattggcctcagctactcagagacatagggaaggcc
tattacgatagagaggcaactacccgtatgcttacaacgccgtctcactatgcctacttg
aaaattgccgaaggttgcgatcgcagttgttcctactgtatcatcccaaaaatcacagga
aggtatcgttctcgccccatgcaggagattttgcaagaggccgaaagactgtcgttagcc
ggagtgaaagagctacaactgatagcccaagacctcacctattacggaatggatttggat
ggacatcgagccttactccccgaattgctaaggcaacttgtatgcatagatgaaatcgag
tggatccgcctacactatgcttacccacaccacttcccatatgagttattggacgtcatt
cgggaagaacccaagatttgcaactatctggatatagccttgcaacacatcagcgataga
atgctcaaacagatgcgccgaaatatctcttccgctgacacttataacttgctccgaaaa
ataagagcagaggtgccaggcattcatctgcgtacaacacttatggttggacacccgggt
gaaacggaagaagatttccaagaattgctgcaatttgttcgtgacattcgtttcgaacgc
atgggagcctttgtctactcgcacgaagagggcacttggtgcgatcaacactatcaggat
gacgtccccaacgaagttaagatagaccgtctcgacaggcttatggctctgcaagaggag
atttccctccccatccagcgttctaaaatcgatacctctctgaaagtcatagtcgatcgc
aaagaagatggctatgcagtggggcgcagtcaatacgattctccggatgtagatcccgag
gtttggatcactgaatatccgggaaaaaatcttgagatagggcagtttgttaccgtttct
gtgaccgatgcgacagcctttgagttgtatgcagaacctatagaatag
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