Porphyromonas crevioricanis: NCTC12858_00346
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Entry
NCTC12858_00346 CDS
T05510
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pcre
Porphyromonas crevioricanis
Pathway
pcre03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pcre00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC12858_00346 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcre03021
]
NCTC12858_00346 (rpoA)
03400 DNA repair and recombination proteins [BR:
pcre03400
]
NCTC12858_00346 (rpoA)
Enzymes [BR:
pcre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCTC12858_00346 (rpoA)
Transcription machinery [BR:
pcre03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCTC12858_00346 (rpoA)
DNA repair and recombination proteins [BR:
pcre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCTC12858_00346 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
SQH72523
UniProt:
A0A0A2FGK7
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All DBs
Position
1:complement(378970..379968)
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AA seq
332 aa
AA seq
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MAILAFQKPDSVLMMEASDSFAKFEFRPLEPGYGITIGNALRRILLSSLEGFAITSIKIE
GVDHEFATIPGVLEDVTNIILKLKQVRFKQLQPDVSEETIRLQIEKKVVFKAGDMNEQLT
GFTVLNPSLEVCHLDPSASMQIELTIKKGRGYQSADENRSDSDEIHTIAIDSIYTPIRNV
KCVVENFRVEQKTDFEKLLLEVSTDGSIHPREALSQAAGILIEHFALFAENNFSVVEEAQ
VSEEAVELSEEDMEMQEILNRPLTEFDLSVRALNCLRAADVDTMGDLVKCTKADLLKVRN
FGRKSLTELEELFEKCNLSFGMDVSKYKLDKE
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcaatattagcatttcaaaaacccgacagtgtattgatgatggaggcttcggactcc
ttcgcgaagtttgagttccgaccattagagcccggctatggcattactattggtaatgct
cttcggcgcatattattgtcctccttggaaggctttgctattacatcgatcaagatagag
ggggtagatcatgaatttgctactattccgggtgtattggaggacgtcaccaatattatt
cttaagcttaagcaagttcgtttcaaacagctacaaccggatgtttccgaggaaaccatt
cgtcttcagatagagaagaaggtggttttcaaggctggggatatgaatgagcaacttacc
ggatttactgtgttgaatccttcccttgaggtttgtcatctagatccatcagcttctatg
cagatagagttgacaattaagaagggacggggctatcagtctgctgatgaaaatcgatct
gattcagatgaaatccacacgattgcaattgactctatctatacgcctatccgcaatgtg
aagtgcgtggtggagaatttccgtgtggagcagaaaacggactttgagaagctcttgttg
gaggtaagtacagacggtagtattcacccgagagaggctctcagccaagctgccgggatt
ttgatcgagcattttgctctcttcgctgagaataatttctctgtagtcgaagaagcacag
gttagtgaagaagctgttgagttgagcgaagaggatatggagatgcaagagattttaaat
cgaccacttaccgagtttgacctctctgttcgtgccttgaattgtcttcgagcagcagat
gtagatactatgggtgatctggtgaaatgtacgaaggcagatctgctcaaggttagaaat
tttggtcgtaaatctctgactgagcttgaagaacttttcgagaagtgcaatctctctttt
gggatggacgttagcaaatataagttagacaaagaataa
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