Porphyromonas crevioricanis: NCTC12858_00390
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Entry
NCTC12858_00390 CDS
T05510
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pcre
Porphyromonas crevioricanis
Pathway
pcre03420
Nucleotide excision repair
pcre03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC12858_00390 (pcrA)
03430 Mismatch repair
NCTC12858_00390 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcre03400
]
NCTC12858_00390 (pcrA)
Enzymes [BR:
pcre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC12858_00390 (pcrA)
DNA repair and recombination proteins [BR:
pcre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC12858_00390 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
NCTC12858_00390 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
PhoH
DEAD
CarD_TRCF_RID
AAA_11
Motif
Other DBs
NCBI-ProteinID:
SQH72567
UniProt:
A0A2X4PXG9
LinkDB
All DBs
Position
1:complement(408075..410414)
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AA seq
779 aa
AA seq
DB search
MTEGQETYLDHLSPAQREAVEYISGPALVIAGAGSGKTRVLVAKVIHLLQRGLLPQDIMA
LTFTNKAAKEMKERISRELNMRLPWNFRVGTFHSIFLREIRNHAERLGLKSDLTVYDTVD
QKSLVKLVVKDLLLDDKVYTPKFCLSRISNAKNRLIDAREYAENREFVAYDAKNRVGRFA
DVYSLYQSRLRASNAVDFDDILVYTNVLLRDFPDLRDEMRAQTKYLLIDEYQDTNLAQYE
IAYRLMGENGKVFAVGDDAQSIYSFRGANLDNILKFQQAFPTARLFKLEENYRSTQNIVR
TANRLIARNTRQIPKEIYSSRPEGDEVEVHSCYTDITEAVYISEQLSELHQSEHIPFAQM
AVLYRTNAQSRLLEQELRKKSIPFHIHGGMSFFSYKEIKDIMAYLKLIVNPDDEEAIYRT
INFPRRGIGDTTIAKLRVLSREKGLSLSELIASPARMSEANIQRSAIVKISGYVELLDRL
RQMAQDDLTALVREVMSDTGIADFYFGDKSVEGISRQENIRELLSGIAQYQEAENEDGRV
PSLSSFLNDMALLTDQDRSDEEEDQVTLMTIHAAKGLEFPYVFVVGLEENLFPSSLCNTP
GEMEEERRLLYVAITRAKEKCVLTFAHNRYQSGRSEMRAPSRFIKELQGEGCRTAGKLSN
LGVFSGLKDQYGNGQERPEWMLRPATDMEHAPEHQPKTSGRKLRRISSGGNLLAKSFGET
QEGETEDFAVGDRVLHSRFGAGVVTSLDGLGSDARATVLFDTVGQKLLLLRFAKLKRIG
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
gtgacagagggacaagagacctatctcgaccatttgagtccggcgcagcgagaagctgtg
gagtatatctccgggccggctctggttattgccggagctggctccggcaagacgcgtgtg
ttggtggctaaggtgatccacttgctgcaacgggggctgttaccccaggacatcatggct
ctcactttcaccaacaaggctgccaaagagatgaaagagcgaatttccagggaattgaat
atgcgactgccttggaatttcagagttggtactttccattccatttttttgagagagatc
aggaatcatgccgaaaggcttggactgaagtcggatcttaccgtttatgatactgtggat
cagaagtcgcttgtcaaacttgttgtcaaggatttgctgttggatgataaggtctataca
cccaaattctgtttgtcacgaatatccaatgccaagaatcgcttgatagatgctcgcgag
tatgcagagaacagggagtttgttgcttatgatgcaaagaatagagttggtcgatttgca
gatgtctattccctctatcagtctcgattgagagcttctaatgctgttgatttcgatgat
atattggtttatactaatgtccttttgagagattttcccgatttgagggatgagatgaga
gcacagaccaagtatctgcttatcgatgagtatcaggataccaatttggcgcaatacgaa
attgcttatcgtctgatgggcgagaatggcaaggtctttgccgtaggagacgatgcccaa
tcgatctattcttttcgtggggctaatttggacaatatcttgaagttccagcaggctttt
cccacagcaaggctctttaagttggaggagaattatcgcagtacacaaaatatcgtgcgc
acggccaatcgtttgatcgctcgcaatacacgacagattcccaaagaaatttattcatcc
aggccagaaggggatgaggtagaggtacattcttgttatacggatattaccgaagctgtg
tatatctcggaacaactgagtgaattgcatcaaagtgagcacatcccatttgcccagatg
gcagttctttaccgcaccaatgcccagtctcgtctcttggagcaagagttgaggaagaaa
tctattccttttcatatacatggagggatgtcttttttctcctacaaagagataaaagat
attatggcatatttgaaactcattgtcaatcctgatgatgaggaggctatctatcgcaca
ataaattttccacgtcgagggataggcgatacaacgattgccaagttgagagtactttcc
cgagagaaggggctctctctctcggaattgatagcttctcctgcacggatgagtgaggcg
aatattcagcgatctgcaatagtcaagatctccggctatgtcgaattgctcgataggttg
cggcagatggcacaggatgatttgacagcattggttcgggaagtgatgtccgacactggt
attgcagatttctatttcggagacaagagtgtggaaggtatttcgcgtcaggagaatatc
cgagagttgctcagtggcattgcacagtatcaagaagcagaaaatgaggatggccgtgta
ccttctctctcttcattcctcaatgatatggctctgcttactgatcaggatcgttctgac
gaggaggaagatcaggttactttgatgaccattcacgcagccaaaggtctggagttcccc
tatgtctttgttgttggtttggaggagaatctttttcccagttctttgtgcaatactccc
ggagaaatggaggaggagcgaaggttgctctatgtcgccattacacgagcgaaagagaaa
tgtgtacttacgtttgcgcataaccgttaccagtccggtcgttccgagatgcgtgcacca
agccgttttatcaaagaattgcagggagaaggttgtaggactgctggcaaattgtcgaac
cttggtgttttctctggtttgaaagatcagtatgggaatggacaggagcgtccggaatgg
atgttgcgtccggccactgacatggagcatgcgcccgagcatcaacctaaaacatccggt
cgtaagctcaggagaatttcctctggaggaaatcttctggcaaaatctttcggggaaacc
caagagggagagacagaggattttgctgtcggagacagagtccttcacagtcgttttgga
gccggtgtggtcacatctttggatggattggggagcgatgcaagagctacggttttgttc
gatactgttgggcaaaagttgcttttgcttcgctttgccaaattaaagagaataggatga
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