Porphyromonas crevioricanis: NCTC12858_00598
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Entry
NCTC12858_00598 CDS
T05510
Symbol
xseA
Name
(GenBank) Exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
pcre
Porphyromonas crevioricanis
Pathway
pcre03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NCTC12858_00598 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcre03400
]
NCTC12858_00598 (xseA)
Enzymes [BR:
pcre01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
NCTC12858_00598 (xseA)
DNA repair and recombination proteins [BR:
pcre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
NCTC12858_00598 (xseA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
SQH72769
UniProt:
A0A0A2FW24
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All DBs
Position
1:651037..652440
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AA seq
467 aa
AA seq
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MTIARSYSLVELCRSLRACIAHGFDGKYWIHAETLDVRTNESSGHCYLELVQKGEDDDRL
IARMRASMWRNVAVEVCSRFKQQTGMDFASGMEVMLLVSVSFHEQFGLSLVIHNIDPAYT
LGDLARRRREIVDRLKHEGLLERNRELPLPRPVRSLAIISSASAAGYGDFVHHLSDTTEG
FVFYTHLYPAVMQGEQAERSILVALERIVADCRLYDAVVVIRGGGAVAELSCFDSYAIAR
AVALFPLPVICGIGHDRDCSVLDIVASVSLKTPTAVADYLISSMRKEADMIERLAMNLRM
GAQQLLLGYADRQERLAIGLSQPLNRLMRCYADRLGSLEKSLAVEGHRFLQVEQRRLSGI
SDKLPLLRREQTNRLLQQLTLCCRRIAPAARQCLALRDRELSLHEQAIRLSEPKRILERG
FVFVTGGNGLFHTRSSSLEAGERVCLHFADGQKIAHIAHTEETDEQQ
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaccattgctcgctcttactcccttgtggagctttgtcggtctttgcgagcatgtatt
gctcatggtttcgacggtaaatattggatacacgccgagaccttggatgtacgcactaac
gaaagtagcggtcattgctatttagaactggttcagaaaggagaagatgacgaccgactg
atagcccgtatgcgtgcttccatgtggcggaacgtagctgtggaggtttgcagccggttc
aagcagcagacaggaatggactttgcttctggtatggaggtaatgcttctggtctctgtt
tcttttcatgagcaattcggcctctctcttgtcattcacaatatagatcctgcctacacc
ttgggcgacttggctcgccgcaggcgggagattgtggatcgcttgaagcatgagggtttg
ttggagcgcaacagagagcttcctctgcctcgtcccgtacgcagcctcgcgatcatttct
tctgcttccgctgccgggtatggcgatttcgtacaccatttgtccgatacgaccgaaggt
tttgttttctacacacatctctatccggctgttatgcagggtgagcaggccgagcgttct
atccttgtagccttggagcgcattgtggcagattgccggctatacgatgctgttgttgtg
atacgtggaggaggagctgtggccgagcttagttgttttgattcttatgccatagccaga
gcagtggctcttttccctctgcctgtgatatgtggtatcggtcatgatagagattgctct
gtattggatattgtagcttctgtctcgctcaagacacccacagccgtagccgattatctc
atttcttcgatgcgtaaggaagccgatatgatagagcgtttggcaatgaacctacgcatg
ggggcacagcaattgctcctcggctatgccgatagacaagagcggttggctatcggcctt
tctcagcctttgaaccgtctgatgcgttgctatgccgatcggcttgggtctttggagaag
agtctggctgtggaggggcatcgcttcttgcaagtcgaacagaggcgtctctcgggtata
agtgataaactccctcttctcaggcgagaacaaacgaaccgtcttctacaacaactgact
ttgtgctgccgacggatagctccggctgctcggcagtgtcttgctcttcgggatagggag
cttagtttgcatgagcaggctatccgtctttcggaaccaaagcgtatcttagagcgaggt
tttgtctttgttacaggaggaaatggcctttttcataccagatcctcttcgttggaagca
ggagagcgggtctgtttgcactttgctgatgggcaaaagattgctcatatagcgcatact
gaagagactgacgaacagcagtaa
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