Porphyromonas crevioricanis: NCTC12858_01087
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Entry
NCTC12858_01087 CDS
T05510
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pcre
Porphyromonas crevioricanis
Pathway
pcre03030
DNA replication
pcre03430
Mismatch repair
pcre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC12858_01087 (dnaX)
03430 Mismatch repair
NCTC12858_01087 (dnaX)
03440 Homologous recombination
NCTC12858_01087 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcre03032
]
NCTC12858_01087 (dnaX)
03400 DNA repair and recombination proteins [BR:
pcre03400
]
NCTC12858_01087 (dnaX)
Enzymes [BR:
pcre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC12858_01087 (dnaX)
DNA replication proteins [BR:
pcre03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC12858_01087 (dnaX)
DNA repair and recombination proteins [BR:
pcre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC12858_01087 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
RuvB_N
AAA_5
AAA_22
DNA_pol3_delta_C
AAA_14
DNA_pol3_delta
AAA_30
AAA_16
AAA_19
AAA_2
Mg_chelatase
AAA_18
nSTAND3
RNA_helicase
AAA_7
AAA_24
AAA_assoc_2
QueC
Motif
Other DBs
NCBI-ProteinID:
SQH73242
UniProt:
A0A2X4SGX2
LinkDB
All DBs
Position
1:complement(1254858..1256705)
Genome browser
AA seq
615 aa
AA seq
DB search
MDTTQYIVSARKYRPDSFATMVGQEALTSTLKAAINSAKTAHAYLFCGPRGVGKTSMARV
FAKTINCLNRTPEGEACNQCESCKAFDEQRSLNIYELDAASNNTVDDIRQLIEQVQIPPQ
IGRHKIYIIDEVHMLSQAAFNAFLKTLEEPPEYVIFILATTEKHKILPTILSRCQIYDFK
RIAVPQIVRHLSHVAQTENIEYEEEALGLIAEKADGGMRDALSLFDRIANFGGGRVTYQD
VVSGLNVLDYEYYFRLIDLFVSGNYKGVLLTLDELLAKGFDAAMIVNGLASFFRDLLMAK
DPNTAILLEKPQAIAKKYVQTASTCSSAFLYQAIRICVGCDQQYRQASNKRLLVELALMS
ISALYSNELKSGVQKAVTQATKTQVTSTPPARPTTADTNHNTTAETATEVPKPAEQPRQT
PPAPLASTETNLTPETPIQPAQQLSNTTPRPSTRQAPIQIGENNRNFIGNRLSVHGIRRD
NTPKEANNLIEDDLHESFTENELQRAWLAYTKEVLTDQVHLRNTMQLCLPKLLDKADFEV
KIYNPAQQEELEEIQISLMSFLRSRLRNTELRMKLSIEDVSSDEDAITNAERIERWRKEN
PNFDKLYQALGLREN
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggatacgacccaatatatagtatcggctcgcaaataccgccccgacagttttgcgacc
atggtagggcaagaagcccttacctctacactcaaggctgctatcaacagtgcaaagact
gctcatgcctacctcttttgtggccccagaggagtaggtaaaacctccatggcacgagtc
tttgccaagacaatcaactgcctaaatcgtactcctgagggagaagcttgcaaccaatgt
gaaagctgcaaggcctttgatgagcaacgttccctgaacatatacgaactagacgcagcc
tcaaacaatacagtagacgacatacggcaactgatagaacaggtacaaatcccaccacaa
atcggcaggcacaaaatctatatcatagatgaggtgcacatgctctcacaagcagctttc
aatgcgtttctcaaaacattggaagagccaccggagtatgtgatattcattctggcaacc
acagagaaacacaagatactacctactattctctcacgatgccagatatacgatttcaaa
cgcattgccgtaccgcagatcgtccggcatttgagccatgtagcccaaacggaaaacatt
gagtatgaggaagaggccttaggcttaatcgccgaaaaagccgatggagggatgcgcgac
gctctctctcttttcgatcgaatagccaatttcggaggcggtcgagttacctatcaagat
gtcgtatcagggctcaatgtattggattacgaatactatttccggctgatcgatctattt
gtttcgggcaattacaagggagttcttctcactttggatgagctattagccaaaggcttc
gatgcagcaatgatcgtaaatggattggcgtcgttcttccgggatctattgatggccaaa
gaccccaatacagctattttgctcgaaaaaccacaagccattgccaaaaagtatgtacag
accgcatctacctgctcctcagcttttttgtaccaggccatacgtatctgcgtcggctgc
gatcaacaatacagacaagcctcaaacaaaaggctacttgtggagcttgctttaatgagt
atctcagctttgtatagcaacgagctgaagtcgggagtgcaaaaggctgtgacacaagca
acaaaaacacaagtcacaagcacaccacctgcccgcccaacaacagcagacacaaatcac
aacacgactgcagagacagcaaccgaagttcccaaaccggctgaacaaccacggcaaacg
ccacccgctccgcttgcttcaacagaaacaaatctgactcctgagactcctatacagcct
gcgcaacagctatcgaatacaactcccagaccgagcacacgacaagctccgatccaaata
ggagaaaacaatcgaaatttcattggaaacagattatccgtgcatggtattcgccgggat
aacactccgaaagaggcaaacaacctcattgaggatgatttgcacgaatcctttacagag
aatgagttgcaacgggcttggttggcatatacaaaagaggttctcaccgatcaggttcac
ctacgcaacaccatgcagctatgcctgcctaaattattagacaaggccgattttgaagta
aaaatctacaatcccgcgcagcaagaggagttggaagagatccaaatatctctcatgtct
tttctcagaagcagactgagaaacacagaattgcggatgaaactgagcatagaagatgtg
agttcggatgaagatgcgataaccaatgcagagcgaatagaacgctggcgaaaagaaaat
ccgaacttcgacaaactgtatcaagccttgggattgcgtgaaaactga
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