KEGG   Porphyromonas crevioricanis: NCTC12858_01113
Entry
NCTC12858_01113   CDS       T05510                                 
Symbol
gyrB_1
Name
(GenBank) DNA gyrase subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
pcre  Porphyromonas crevioricanis
Brite
KEGG Orthology (KO) [BR:pcre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pcre03032]
    NCTC12858_01113 (gyrB_1)
   03036 Chromosome and associated proteins [BR:pcre03036]
    NCTC12858_01113 (gyrB_1)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pcre02048]
    NCTC12858_01113 (gyrB_1)
Enzymes [BR:pcre01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     NCTC12858_01113 (gyrB_1)
DNA replication proteins [BR:pcre03032]
 Prokaryotic type
  DNA Topoisomerases
   NCTC12858_01113 (gyrB_1)
Chromosome and associated proteins [BR:pcre03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    NCTC12858_01113 (gyrB_1)
Prokaryotic defense system [BR:pcre02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    NCTC12858_01113 (gyrB_1)
SSDB
Motif
Pfam: DNA_gyraseB Toprim HATPase_c DNA_gyraseB_C
Other DBs
NCBI-ProteinID: SQH73268
UniProt: A0A0A2G3H3
LinkDB
Position
1:complement(1288305..1290227)
AA seq 640 aa
MSTVSYSDSDIKTLEWDEHIRRRPGMYIGKLGDGTYPDDGIYVLLKEVLDNSIDEFVMGA
GKHIRLDIADGSVVVRDFGRGIPMGKLVDATSKMNTGGKIDSKAFKKSVGLNGVGIKAVN
ALSSLFKVTVWRDGSSKSVTYAKAQLLEETEAFPSEEKSGTEVRFTPDNSLFKNYHYRDE
YVIAMVKNYVFLNAGLTVTFNGKTYYSKEGLSDLLRENMTGEALYPIIHLRDSDIEVVVT
HTQQYGEEFYSFVNGQNTTQGGTHLSAFREAVARVIKEFFAKNFEYSDIRSGMSAAISLK
VEEPVFESQTKTKLGSRDMYPDGPTIQKFVGDFLKKELDNYLHIHSEDSEAMLRKIQESE
RERKAMSGVTKLARERAKKSNLHNRKLRDCTTHFNDPKAKEPERTSIFITEGNSASGSIT
TSRDPAYQAVFSLLGKPLNSFGLTKKVVYENEEFNLLQAALNIEDGIEGLRYNRVIIATD
ADNDGMHIRLLLITFFLQFFPDLVRRGHVFVLETPLFKVALPKEGLKGRSFSDKSQKRKS
KTISIDRDTPSVIYCYSEAEKQHALRTLGKRAHITRFKGLGEISADEFKELITEENIKLE
PVRMKREDNVTDLLAFYMGKNTPKRQDFIIDNLVVDEEML
NT seq 1923 nt   +upstreamnt  +downstreamnt
atgagtacagtctcttatagcgatagcgatatcaagacccttgagtgggatgaacatatc
cgtcgccggcctggcatgtatattggcaagctcggtgatggaacgtacccagatgatggg
atatatgtgttactgaaagaggttctagacaactcaatagacgagttcgtaatgggggct
ggcaagcatatccggttggatatagctgatgggtctgttgtggtaagagacttcggtcgc
ggtatccctatgggcaagctggtagatgcaaccagcaaaatgaacacaggagggaagata
gattccaaagcatttaaaaaatctgttggcctgaatggagtaggtataaaagcggtgaac
gcactatcctctcttttcaaagtaacggtctggagagacggtagtagcaagagtgtaacc
tacgcgaaggctcagctcttagaagagacagaagcctttcccagtgaagaaaaatccggg
acagaggttcgtttcacgccagacaactctctattcaagaactaccactatcgagacgaa
tatgtgatagcaatggtcaagaattacgtttttctaaatgccggtctcacagtcacattt
aatggaaaaacgtattactccaaggaaggactctctgatcttctccgggaaaatatgaca
ggagaagccctctacccaatcattcatctgagagactctgacatagaggtggtcgtaacc
catacacagcaatatggggaagaattttacagttttgtcaatggacaaaacacaacacaa
ggaggtacgcatctcagcgcatttagagaggcggtagctagggttattaaagagtttttt
gcaaaaaactttgagtactcggatatacgctccgggatgagtgctgctatcagtctcaag
gtggaagaacccgtatttgaaagtcaaacaaagactaaactcggatcaagagatatgtat
ccggatggccccacgatacaaaaattcgttggagatttcttaaagaaggagctggataat
tacctacatatccatagcgaggatagtgaagcgatgctacgcaagatacaagagagcgag
cgtgagcgaaaagcgatgagtggagtgacaaaattggctcgtgaacgagctaagaagtct
aacctgcacaaccgtaagctacgtgattgtacgactcacttcaacgatccgaaagcaaag
gaaccggaacgtacttcaatatttatcaccgaagggaattcggcaagtggatcaatcacc
acgagtcgagatcctgcatatcaagctgtattcagccttttgggcaagcctctcaatagt
tttggactgacaaagaaagttgtgtacgagaatgaagagtttaatctcttacaagcagct
ctgaacatagaagacggaatagaaggactccgctacaatcgggtaattatcgctaccgac
gctgacaatgacgggatgcacattcgactgttactaatcactttctttctgcaatttttc
cctgacttagtacgccgtgggcatgtgtttgtgttagaaacaccccttttcaaggttgca
ctccccaaagagggactaaaaggaaggagcttctctgataaaagccagaagcgaaaaagc
aagacgattagtatagatcgggatactccttctgttatatattgttactccgaagctgaa
aaacaacatgccttgcgtactcttggcaaaagagctcacatcacacgattcaaaggtctt
ggagaaatatcagctgatgaattcaaggaacttatcacagaagagaatatcaagctggaa
ccagtacgtatgaagcgagaagacaatgtaactgacctgcttgcattctatatgggcaag
aacacccccaaaagacaagactttattatagataatcttgtagtggatgaagagatgctc
taa

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