Porphyromonas crevioricanis: NCTC12858_01274
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Entry
NCTC12858_01274 CDS
T05510
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pcre
Porphyromonas crevioricanis
Brite
KEGG Orthology (KO) [BR:
pcre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcre03400
]
NCTC12858_01274
DNA repair and recombination proteins [BR:
pcre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NCTC12858_01274
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Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
Lon_C
AAA_22
ChlI
DnaB_C
AAA
AAA_16
AAA_24
nSTAND3
AAA_19
AAA_14
AAA_29
NTPase_1
NACHT
RsgA_GTPase
Zn_ribbon_RPB9
ABC_tran
MCM
AAA_5
DUF7129
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
SQH73419
UniProt:
A0A0A2FU51
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Position
1:complement(1470828..1472213)
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AA seq
461 aa
AA seq
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MTKLKSVFACTNCGAIYPKWMGKCNACGEWNTIEEEIEHPSPANNPAKRYGWTDIMSENS
PQRLNEISYEKEPRIDLCDMELNRVLGSGLVPGSFVLLAGEPGIGKSTLVLQTVMQAKHL
QTLYVSGEESAKQIKLRADRLGEEQSHCHIYTETRIEHILAEAGKLQPDLLVIDSVQTVY
TEQSESTPGSVGQIREVAAQLLRFCKITGIPIILIGHITKEGQVAGPKLLEHTVDVVLQF
EGDKQHMYRLVRAIKNRFGNTAEIGIYEMTGKGLRPVENPSEQLINHRSLGLSGIAIACS
MEGARSLLIETQALVSSAVYSTPQRSATGFDIRRLNMLLAVLEKRSGFRLIEKDVFLNIA
GGIRTADPAADLAVISAILSSSLDIAVSPGVCLCGEVGLAGEIRAVSRIRQRISEAERLG
FDTMLYPQGNLDSDGEIKTTRLKLIPISKVEDAFRFLFAGR
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgactaagctcaaatctgtctttgcttgcactaattgcggtgccatttatcccaaatgg
atgggtaaatgcaatgcttgtggagaatggaatacaattgaggaagaaattgaacatcca
tctccggcaaataatccggcaaaaagatatggatggacagatatcatgagcgagaattca
ccacagaggttaaacgaaatctcctatgaaaaagaacctcgaatcgacctttgtgatatg
gagcttaatcgtgtgttgggatcggggctcgtacctgggagctttgttttgctggccgga
gagcctggcatcgggaaaagcactcttgttttgcagaccgtaatgcaagcaaaacatcta
caaacgctctatgtgtcgggagaggaaagtgccaaacagattaagctgagggcggatcgc
cttggagaagaacagtctcattgtcatatctatacagagacccgtatcgagcacatactg
gctgaagctggtaagttgcagcccgacttgcttgtgatagattccgtacaaactgtttac
actgagcaatccgagagcacccccggatctgtggggcaaattagagaagtggcagcccag
cttctacgattctgcaaaataacgggcataccgataattctcataggacatataacgaaa
gagggacaagtagctggccctaaactattggagcacacagtggatgtagtgctccaattt
gagggagataaacagcatatgtatcgtttggtacgagcaataaaaaatcgttttggaaat
acagccgagattggtatttacgagatgacagggaaaggattaagacctgtcgagaatcca
tcggagcaacttatcaaccatcggagccttggacttagcggtattgcgattgcttgcagc
atggaaggtgctcgcagtttgctcatcgaaacgcaagctttggtaagttcggctgtctac
tctaccccacaacgttcggctacaggttttgatatacggcgcctgaatatgctattggct
gtattggagaaaaggagtggattcagactgatagaaaaggatgtctttctgaatattgcc
ggagggatacgcactgctgatccggcagccgatttggccgttatttcggctatactatcc
tcaagcttggatattgcagtcagtccgggggtatgcctatgtggagaagtggggttggca
ggagagataagagccgttagtcgtatcagacaacgaatatccgaggcagaacgcttgggc
ttcgatacaatgctttatcctcaggggaatttggatagtgatggagagatcaagacgaca
aggctgaagcttatacctatcagtaaggttgaagatgctttccgcttcctttttgcaggt
cgctga
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