Porphyromonas crevioricanis: NCTC12858_01479
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Entry
NCTC12858_01479 CDS
T05510
Name
(GenBank) TL29
KO
K03530
DNA-binding protein HU-beta
Organism
pcre
Porphyromonas crevioricanis
Brite
KEGG Orthology (KO) [BR:
pcre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcre03032
]
NCTC12858_01479
03036 Chromosome and associated proteins [BR:
pcre03036
]
NCTC12858_01479
03400 DNA repair and recombination proteins [BR:
pcre03400
]
NCTC12858_01479
DNA replication proteins [BR:
pcre03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NCTC12858_01479
Chromosome and associated proteins [BR:
pcre03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
NCTC12858_01479
DNA repair and recombination proteins [BR:
pcre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
NCTC12858_01479
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
FliG_N
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
SQH73615
UniProt:
A0A0A2FF87
LinkDB
All DBs
Position
1:complement(1704095..1704367)
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AA seq
90 aa
AA seq
DB search
MTKADIVSEISKATGIDREVALEVVESFMENVRTALANGDNVYLRGFGSFLVKERAAKTA
RNITKQTTIIIPKRKVPAFKPSKLFAAKVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaggcggatatagtaagtgagataagcaaagctacgggtatagatcgggaagtt
gcccttgaagtggtggagtcttttatggagaatgtgcgcacggctcttgccaatggagac
aatgtttacctcagagggtttggtagtttccttgttaaggaacgtgcagccaagacagct
cgcaatattaccaaacagactactataattatccctaaacgcaaagtgccggctttcaag
ccttcgaaactttttgcagctaaagtgaaataa
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