Pelecanus crispus (Dalmatian pelican): 104024276
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Entry
104024276 CDS
T08340
Symbol
CHD4
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 4
KO
K11643
chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
pcri
Pelecanus crispus (Dalmatian pelican)
Pathway
pcri03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pcri00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104024276 (CHD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcri03036
]
104024276 (CHD4)
Chromosome and associated proteins [BR:
pcri03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
104024276 (CHD4)
Chromatin remodeling factors
NuRD complex
104024276 (CHD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
HDA2-3
ResIII
PHD-1st_NSD
PHDvar_NSD
HTH_CHD1_Hrp3
PHD_2
DEAD
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
104024276
NCBI-ProteinID:
XP_009482573
LinkDB
All DBs
Position
Unknown
AA seq
1893 aa
AA seq
DB search
GHVASSPPEPEEEPEEELLSEAETPKIKKKKKPKKLKEPKVPKLSKRQKKELGDSSGEGN
EFVEEEEEVLRSDSEGSDYTPGKKKKKKLGPKKEKKNKAKRKEEEEEEEEDDDSKEPKSS
AQLLEDWGMEDIDHIFTEEDYRTLTNYKAFSQFVRPLIAAKNPKIAVSKMMMVLGAKWRE
FSTNNPFKGSSGASVAAAAAAAVAVVESMVTNVDAVLPQPPVDVPLRKAKTKEGKGPNAR
RKPKASPRIPDIKKPKTKKVAPLKIKLGGFGSKRKRSSSEDDDLDVESDFDDASINSYSV
SDGSTSRSSRSRKKLKAGKKKKKGEEDSTVAVDGYETDHQDYCEVCQQGGEIILCDTCPR
AYHMVCLDPDMEKAPEGKWSCPHCEKEGIQWEAKEDNSEGEEILEDVVGDAEEEDDHHME
FCRVCKDGGELLCCDACPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALKGKVQKILIWKW
GQPPVGPPPPRPPDADPNAPPPKPLEGRPERQFFVKWQGMSYWHCSWVSELQLELHCQVM
FRNYQRKNDMDEPPSGDFGGEEEKSRKRKNKDPKYAEMEERFYRYGIKPEWMMIHRILNH
SVDKKGNVHYLIKWRDLPYDQASWESEDVDIQDYDLYKQAYWNHRELMRGEEGRPGKKLK
KVKMRKLERPPETPTVDPTVKYDRQPEYLDVTGGTLHPYQLEGLNWLRFSWAQGTDTILA
DEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK
DSRAIIRENEFTFEDNAIRGGKKASRMKKEAAVKFHVLLTSYELITIDMAILGSIDWACL
IVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLTFLTPERFHNLEGF
LEEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYIL
TRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASG
KLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAID
RFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVM
IYRFVTRASVEERITQVAKKKMMLTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDE
ATEGGDNKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQGMNEYLSSFKVAQYVVREEE
MGEEEEVEREIIKQEESVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDGSQE
DRDWQDDQSDNQSDYSVASEEGDEDFDERSEAARRPSRKGLRNDKDKPLPPLLARVGGNI
EVLGFNARQRKAFLNAIMRYGMPPQDAFTTQWLVRDLRGKSEKEFKAYVSLFMRHLCEPG
ADGAETFADGVPREGLSRQHVLTRIGVMSLIRKKVQEFEHVNGRWSMPELAEIEENKKLS
QPSSPSPKTPTPSTPGDTQPNTPAPVPPPEEGVKAEEGASAKEQGESSEPEKELSASATE
TEVPMEQCAQPVETPPQEAKSPVNPTEADEKKVEELEVKERPDEPMEVESKADVEKVEDR
APIENPPEPPIITLDEKDEKKDDDKRDLVMLQNGEMLKESVDERHKKAVKQRFMFNIADG
GFTELHSLWQNEERAATVTKKTYEIWHRRHDYWLLAGIINHGYARWQDIQNDPRYAILNE
PFKGEMNRGNFLEIKNKFLARRFKLLEQALVIEEQLRRAAYLNMSEDPSHPSMALNTRFA
EVECLAESHQHLSKESMAGNNPANAVLHKVLKQLEELLSDMKADVTRLPATIARIPPVAV
RLQMSERNILSRLANRSSEPPPPPPPQQVAQQQ
NT seq
5684 nt
NT seq
+upstream
nt +downstream
nt
tgggacatgttgcctcttcccctccagagcctgaagaagagccagaagaagagcttctgt
cagaggctgagacgcccaaaatcaagaagaagaagaagcccaagaaactaaaggaaccca
aagtgcccaagctcagcaagcgtcagaagaaggagctgggggacagctctggtgagggga
atgagtttgtggaggaagaagaggaggttctgcgctctgacagtgagggcagtgactaca
ctcctgggaagaagaaaaagaagaaattagggcccaagaaggaaaagaaaaacaaagcca
agcgcaaggaggaggaggaagaagaggaagaagatgatgactcaaaggagccgaagtcgt
ctgctcagctcctggaagattggggcatggaggatattgatcatatcttcacagaggagg
attaccgcactctcaccaactacaaagctttcagccagtttgtcaggccacttattgcag
ccaagaaccctaaaatagcagtgtcgaagatgatgatggtactgggagccaaatggaggg
agtttagcacaaacaaccccttcaagggaagttcaggtgcatctgtggcagctgctgcag
ctgcagctgttgcagtagtggagagtatggtgacaaatgtggatgctgtcctgccgcagc
cccctgtagatgtgccactcaggaaagccaagacaaaggagggcaaaggacccaatgctc
ggcggaagccaaaggccagtcctcgtattcctgatatcaagaaacctaaaacaaagaaag
tggcacctttgaaaatcaaactgggaggatttggttccaagcgtaaaagatcatcgagtg
aagatgatgatctggatgtggaatcagacttcgatgatgcaagcatcaacagctactctg
tttcagatggatccacaagccgtagtagccgcagtcgcaaaaaactcaaagctgggaaaa
agaaaaagaaaggtgaggaggactccacagtggctgtggatggctatgagactgatcacc
aggactactgtgaggtgtgccagcagggaggagaaattatactgtgtgatacctgccctc
gtgcctaccacatggtttgcctggacccagacatggagaaagccccagagggcaaatgga
gctgcccacactgtgaaaaagagggcattcagtgggaagcaaaggaggataactctgaag
gtgaggaaatcctggaggatgttgtgggggatgctgaggaagaggatgaccaccatatgg
agttctgtagagtctgcaaggacggaggagagctgctgtgctgtgatgcctgtccttcat
cctatcacatccactgtctgaatcccccattgccagagattcccaacggagagtggctgt
gccctcgctgcacttgcccagctttgaaaggaaaggtgcagaagatcttgatctggaaat
ggggtcagcccccagttggccccccaccaccacgtccacctgatgcagaccctaatgctc
ctccccctaagcctctggagggtcggcctgaaaggcagttctttgtcaaatggcagggca
tgtcctactggcactgctcttgggtgtcagagttgcagctggagctgcactgccaggtca
tgtttcgtaactaccaacgcaaaaatgacatggatgagccaccctcaggggactttggag
gagaagaggagaaaagccgaaagagaaaaaacaaggaccccaaatatgctgagatggagg
agcgcttctatcgatatgggatcaagcctgagtggatgatgatccacaggatccttaatc
atagtgtggataagaaggggaatgtccactatttgattaaatggagagacctaccctatg
accaggcatcctgggaaagcgaagatgtggatatccaagattatgacctctacaagcaag
cctactggaatcacagggagctgatgagaggtgaagagggcaggccgggtaagaagttaa
agaaagtgaagatgcggaaactggagaggccccctgagactcccacggtagatccaacag
tgaaatatgaccggcaaccagagtacctcgatgtaacaggggggaccttgcatccctacc
aactggaaggactgaactggctgcgcttctcttgggcccagggcacagatacaatcttgg
ctgacgaaatgggtctgggaaagactgtgcagacagctgtgttcctatattccttataca
aagagggccactcaaagggtccctttttggtgagtgcccccctgtccacaattatcaact
gggaacgagaatttgagatgtgggccccagatatgtatgtagtcacctacgtcggggaca
aagacagccgggccatcatccgtgagaatgagttcacttttgaggataatgccatacgtg
gaggcaaaaaagcatccagaatgaagaaggaggctgctgtgaagttccacgtgcttctca
cctcctatgaactgatcacaatcgatatggccatactaggctctattgactgggcctgtc
tcattgtggatgaagctcacagactgaagaacaatcagtctaagttcttccgtgtgctga
atggttactcactccagcacaagctgctgcttacaggaactcccctgcagaacaacctgg
aagaactgttccacctgctgaccttcctgacgccagagagattccataacttggagggct
tcctagaagagtttgcagatattgccaaggaagatcagatcaagaagctgcatgacatgc
tgggcccacatatgctgaggcgtctcaaagctgatgttttcaagaatatgccatctaaga
ctgaactcattgtcagagtggagttgagccccatgcagaagaaatactataaatacattt
tgacaagaaactttgaggcactgaatgcacggggtggtggtaaccaagtctccttgctca
atgttgtgatggatctgaagaagtgctgtaaccacccctacctctttcctgtggctgcta
tggaagctccaaaaatgccaaatggcatgtatgatggtagtgctcttattcgagcctctg
gaaagctgttgctgctccagaagatgttaaagaaccttaaggaaggaggtcacagggtgc
tcatattctctcagatgactaaaatgttggaccttctagaagactttttggaacatgaag
ggtacaaatacgagcggattgatggaggaatcacagggaacatgcgtcaggaagctattg
atcgcttcaatgctcctggtgctcagcagttctgctttctgctttcaactcgagctgggg
gtcttggtattaacttggccacagcagatactgtgattatctatgattcagactggaacc
cccacaatgatatccaggccttcagtcgtgcacacagaattggacagaacaagaaagtga
tgatataccgctttgtgacaagggcctcagtggaggagcgtatcactcaggtggccaaga
agaaaatgatgttaactcatctggtagtgagaccagggctgggctccaagacaggctcca
tgtccaaacaggaacttgatgacattctcaaatttggcactgaagagctcttcaaggatg
aggctactgaggggggggataacaaagaaggtgaggacagcagtgtcatccactatgatg
acaaagcaattgagcgtctgttggatcggaaccaggatgaaacagaagacacagaacttc
agggcatgaacgagtatctcagctccttcaaggtggcccagtatgtggttcgtgaagagg
agatgggggaggaagaggaggttgaacgggagatcattaagcaggaggagtcagtggatc
ctgattactgggagaaactgctgcgtcaccattatgaacagcaacaggaggatctggcca
ggaatctgggcaagggcaaacgtattcgcaagcaagttaactacaatgatggctcacagg
aggatagagactggcaggatgaccagtcagataatcagtcagactattcagttgcttctg
aagaaggagatgaggactttgatgagaggtctgaagcagctcgtcggcctagccgcaaag
gcctgagaaatgataaggataagcctctacctcccttacttgcccgtgtgggagggaaca
ttgaggtcttgggtttcaatgcccgccagcggaaagccttcctcaatgctatcatgcgct
atggaatgccacctcaggatgccttcaccactcagtggcttgttcgggacctccgtggca
agtcagagaaagagttcaaggcctatgtctcgttgttcatgcgccatttatgtgaacctg
gagctgatggcgcagagacctttgcagatggggtcccacgggaaggtctttctcgacagc
atgtccttactcgcattggggtcatgtcacttatacgtaaaaaggtacaggaatttgagc
atgtgaatggccgttggagtatgccagaactggcagagatagaggagaacaagaaacttt
cacagccaagttcaccctctcccaaaactccaactccttcaacaccaggggatacacagc
cgaatacgcctgcccctgtccctccacctgaagaaggagtaaaagcagaagaaggagcca
gtgctaaggagcaaggagagtcatctgaaccagagaaagagctcagtgcctctgctactg
aaacagaggtccctatggagcagtgtgcccagcctgtggagacaccgccacaggaagcaa
aatccccggtgaaccccacagaagcagatgaaaaaaaagtagaggaactggaggtgaagg
aaagaccagatgagccaatggaagtagaaagcaaagctgatgtggagaaagtggaagaca
gagcacctattgagaatccccctgaacctcctataatcactctggatgagaaagatgaga
aaaaggatgatgataagagagatctggtgatgctgcagaatggagagatgctgaaagagt
cagtagatgaaaggcataagaaggcagtaaagcagcgcttcatgttcaacatagcagatg
gtggcttcactgaactacactccctgtggcagaatgaagagcgggctgcaactgtcacaa
agaagacctatgagatctggcaccggcgtcatgactactggctccttgctgggattatca
atcatggctatgcccgttggcaggatattcagaatgatccacgttacgccatcctcaatg
aacccttcaagggtgagatgaacaggggtaacttcctggaaataaagaataagttcttgg
caaggagatttaagctcctggagcaagcactggtgattgaggagcagctgcggcgagctg
cctatctgaacatgtcggaagacccatctcacccatccatggctctgaacacacgtttcg
cagaggtggaatgcctggctgagagccaccagcacctatccaaggagtcaatggccggga
acaacccagccaatgccgtgctgcacaaagttctgaagcagctggaggagcttttgagtg
acatgaaggcagatgtgactcgtttgcctgccaccattgcccgtatcccacccgtggcag
tgcgcctccagatgtccgagcgcaacatcctcagccggctggctaaccgcagcagtgagc
cccctccaccgccgcctccccaacaagtggcccagcagcagtga
DBGET
integrated database retrieval system
