Pelecanus crispus (Dalmatian pelican): 104024375
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Entry
104024375 CDS
T08340
Symbol
SMG1
Name
(RefSeq) serine/threonine-protein kinase SMG1
KO
K08873
serine/threonine-protein kinase SMG1 [EC:
2.7.11.1
]
Organism
pcri
Pelecanus crispus (Dalmatian pelican)
Pathway
pcri03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcri00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104024375 (SMG1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pcri01001
]
104024375 (SMG1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcri03019
]
104024375 (SMG1)
Enzymes [BR:
pcri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
104024375 (SMG1)
Protein kinases [BR:
pcri01001
]
Serine/threonine kinases: Other
PIKK family [OT]
104024375 (SMG1)
Messenger RNA biogenesis [BR:
pcri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
104024375 (SMG1)
mRNA cycle factors
Common to processing body (P body) and stress granule
104024375 (SMG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PI3_PI4_kinase
FATC
HEAT_ATR
HEAT
Motif
Other DBs
NCBI-GeneID:
104024375
NCBI-ProteinID:
XP_009490070
LinkDB
All DBs
Position
Unknown
AA seq
2304 aa
AA seq
DB search
MPFMTTMQLLCVFQDCLIPLFNDALRSCKQHDVRPWMHALRYTVYQNQLMEKLKEPTVPI
KSHLMELGLTAAKFARKRGNIALATRLLAQCSEVQLGKTTTAQDLVQHFKKLSAPGQIDE
KWGPELDIEKTKLLYTAGQSTHAMEMLSSCAISFCKSAKAEYAVAKSILTLAKWIQAEWK
EISGQLKQVYRARQQQNHTGLSTLSKNIYNLIDLPAVNTLEEEYPRIESESTVNIGVGEP
DFILGQLYHLSSVQAPEVAKSWAALASWAYRWGRKVVDNASQGEGVRLLPREKSEVQNLL
PDNIAEEDKEKIYGILGQAVCRPAGIQDEDMTLQITENEDNEEDDMVDVIWRQLLTSCPW
LSDLDENATEGLIKVWRKVVDRIFSLYKLSCSAYFTFLKLNAGQVPLDEDDPRLHLRNTS
EQSTDDVIVMATLRLLRLLVKHAGELRQYLEHGLETTPTAPWRGIIPQLFSRLNHPEVYV
RQSICNLLCRVAQDSPHLILYPAIVGTISLSSESQTSGNKLPSAIPTLLGNIQGEELLGG
ECDGGSPPASQESSKDDTKVGLNEDQAMMQDCYSKIVEKLSAANPTMVLQVQMLVAELRR
VTVLWDELWLGVLVQQHMYVLRRIQQLEDEVKRVQNNNTLRKEEKIAIMREKHTALMKPI
VFALEHVRSITAAPAETPHEKWFQDNYGDAIENALEKLKNPLNPAKPGSSWLPFKEVMLS
LQQRAQKRASYLLRLEEISPWLAAMMSTEIALPGEVSTRDTVTIHSVGSTITILPTKTKP
KKLLFLGSDGKNYPYLFKGLEDLHLDERIMQFLSIVNTMFATINRQETPRFHARHYSVTP
LGTRSGLIQWVDGATPLFGLYKRWQQREAALQAQKAQDSYQTPQNPGIVPRPSELYYSKI
GPALKAVGLSLDVSRRDWPLNVMRAVLEELMEATPPNLLAKELWSSCTTPDEWWRVTQSY
ARSTAVMSMVGYIIGLGDRHLDNVLIDMTTGEVVHIDYNVCFEKGKSLRVPEKVPFRMTH
NIETALGVTGVEGVFRLSCEQVLHIMRRGRETLLTLLEAFVYDPLVDWTAGGEAGFAGAV
YGGGGQQAENKQSKREMERDITRSLFSSRVAEIKVNWFKNRDEMLAVLPKLDSSLEEYLN
LQEQLTDVEKLQGKLVEEIEFLEGAEGVDHPSHTLQHRYSEHTQLQSQQRAVQEAIQVKL
NEFEQWITHYQTAFSNLEATQLASLLQEISTQMDLGPPSYVPATAFLQNAGQAHLISQCE
QLEGEVGALLQQRRSVLRGCLEQLHNYATVALQYPKAVFQKHRIEQWKTWMEELICNMTI
ERCQDIFRKYEIQYAPQPPPSMCQFITATEMTLQRYAADINNRLIRQVERLKQEAVTVPV
CEEQLKEIERCIKVFLHENGEEGSLSLASVIISALCSLTRRNLMMEGAASSAGEQLVDLT
SRDGAWFLEELCSMSGNVTCLVQLLKQCHLVPQDLDIPNPIEASEAVHLANGVYISLQEL
NSNFRQIIFPEALRCLMKGEYTLESMLHELDNLIEQTTDGVPLQTLVESLQAYLRNAAMG
LEEETHTHYIDVARVLHAQYGELIQPRNGSVDETPKMSAGQMLLVAFDGMFAQVETAFGL
LIEKLNKMEIPVAWRKIDIIREARSTQVNFFDDDNNRQVLEEIFFLKRLQTIKEFFRLCG
TFSKTLSGISSLEDQNAVNGPVQIVNVKALYRNSCFSEDQMAKPIKAFTADFVRQLLIGL
PNQALGLTLCSFISALGVDIIAQVEAKDFGAESKVSVDDLCKKAVEHNIQIGKFSQLVMN
RATVLASSYDTAWKKHDLVRRLETSISSCKTSLQRVQLHIAMFQWQHEDLLISRPQAISV
SPPPRSAILASMKKKLHTLSQIEASIAAVQEKLAALEASIEQRLKWAGGANPALAPVLQD
FDATIAERRNLVLKESQRASQVTFLCSNIIHFESLRTRTAEALNLDAALFELLKRCQQMC
SFASQFNSSVSELELRLLQRVGTGLEHPIGSSEWLHSAHKQLTQEISTQRTVQTEREQQI
ETVCETIQNLVDSIKTVLTGHNRQLGDVKHLLKAMAKDEEAALADGEDVPYENSVRQFLG
EYKSWQDNIQTVLFTLVQVMGQVRSQEHVEMLQEITPTLKELKTQSQSVYNNLVGFASPL
VTDTSNECSSPTSAATYQPTFAAAVRSNTGQKTQPEVMSQNARKLIQKNLATSADTPPST
VPGTGKSVACSPKKTARDPKTGKAVQERNSYAVSVWKRVKAKLEGRDVDPNRRMSVAEQV
DFVIKEATNLDNLAQLYEGWTAWV
NT seq
6915 nt
NT seq
+upstream
nt +downstream
nt
atgcctttcatgacaactatgcaacttctgtgcgtctttcaggactgtcttatacctctc
ttcaatgatgctttgaggtcatgcaaacaacatgatgtaaggccatggatgcatgcactg
aggtacacagtgtatcagaatcaattgatggaaaaacttaaagaaccaacagtcccaatt
aaaagccatctaatggagctgggcttaacagcagcaaaatttgcacggaagcgaggaaat
attgccctagctacacgactgcttgcccagtgcagtgaagttcagctaggaaaaaccacc
actgcacaagacttagtccagcacttcaaaaaattgtctgcaccaggtcagatagatgaa
aaatggggtcctgaacttgatatcgagaaaacaaagttgttatacacagcaggtcagtca
acacatgccatggaaatgctgagttcctgtgccatatccttttgcaaatctgccaaagct
gaatatgcagttgctaaatctattctcacactggctaaatggattcaagcagaatggaaa
gagatttcaggacagttgaaacaagtatatagagctcgacagcagcagaatcacactgga
ctgtcaaccttgtctaaaaacatatataatttgattgatctcccagctgttaatacacta
gaagaagaatatcctaggattgaaagtgaatctacagtgaatattggagttggagagcct
gacttcatcttgggacagctgtatcacttgtcttcagtacaggcacctgaagtagccaag
tcttgggcagccctggctagttgggcttatagatggggccggaaagtagttgataatgcc
agtcagggagaaggtgttcgtctgctgccccgggaaaaatctgaggttcagaacttgctt
ccagacaacattgcggaggaagataaagagaaaatctatgggattcttgggcaggcagtg
tgtcgtccagctgggattcaagatgaagatatgactctacaaatcactgaaaatgaagac
aatgaagaagacgatatggtggatgttatatggcgtcagttattaacaagttgtccctgg
ctttcagatcttgatgaaaatgcaacagaagggttaattaaagtgtggaggaaagttgta
gacagaatcttcagtctctataaactctcctgcagtgcatactttactttcctcaaactc
aatgctggtcaggttccacttgatgaagatgatcccaggctgcacttaagaaatacttct
gagcaaagcactgatgatgttattgtgatggcaaccctaagactgttacgattgcttgtg
aaacatgctggagaacttagacagtatctagagcatgggctagaaactacacctactgct
ccttggagaggtattatacctcagcttttctcccgcctgaatcacccagaagtgtatgtt
cgtcagagtatttgcaacttactgtgtcgagtggctcaagattctcctcatctcatacta
tatcctgcaatagtgggtaccatttcacttagcagtgaatcccagacttcaggaaacaag
ctgccttctgccatccctactttgctaggtaatattcaaggagaagaactgttgggtggt
gaatgtgatggagggagccccccagcttctcaagaaagtagtaaagatgacacaaaagtt
ggattaaatgaagatcaagcaatgatgcaagattgttacagcaaaattgtggagaaactc
tctgctgcaaatccaacaatggtattgcaggttcagatgctagtggctgagctgcgcaga
gttacagttctttgggatgaactgtggttgggagttctagtgcagcagcacatgtatgtc
ctcagaaggattcaacaactggaagatgaagtcaagagggtccaaaacaacaacacttta
cggaaggaggagaagatagcaatcatgcgtgaaaagcatacagctctaatgaagcccatt
gtatttgctttggaacatgtacggagcatcactgcagctcctgcagaaactcctcatgag
aaatggtttcaggataactatggagatgcaattgaaaatgcactagagaaacttaagaat
cctttgaatcctgctaaacctggaagcagctggctcccatttaaagaggttatgctaagt
ttgcagcaaagagcacagaaacgggctagttaccttttacgtcttgaagaaatcagccct
tggttggctgccatgatgagcactgaaatagcacttcctggagaagtatctactagagac
acagtcacaattcatagtgtgggcagcaccatcacaattctgcctaccaaaaccaaacct
aaaaagctgcttttcctgggttcagatgggaagaactatccctatctgttcaaaggttta
gaagacttgcatctagatgaaagaatcatgcaattcttatcaattgtgaacacaatgttt
gccacaattaaccgtcaagagacaccaaggttccacgcgaggcactactctgtgacacct
ctgggaacgagatcgggcttgatccagtgggtggatggagctacacctttgtttggtctt
tacaagcggtggcaacagcgagaagctgctttacaagcacaaaaggctcaggactcttac
cagactcctcagaatcctggaatagtgcctagacccagtgagctttactacagtaaaatt
gggcccgcattaaaggcggttgggcttagtcttgacgtgtcacgtcgtgactggcccttg
aatgtcatgagggctgttctagaagaactgatggaagcaactcccccaaatcttctagct
aaggagctctggtcatcatgtactacaccggatgaatggtggagagttacacagtcgtat
gcaagatccactgcagttatgtccatggttggctacatcattggtcttggagacagacat
ctggataatgttcttatagatatgactacaggagaagttgtccacatagattataatgtt
tgctttgaaaaagggaaaagccttagggtaccagagaaggttccgttccggatgacgcac
aatattgaaacagcacttggagtgacaggagtagaaggggttttcaggctttcttgtgaa
caggtccttcatattatgcggcgtgggagagagactttgcttacattgcttgaagctttt
gtttatgatcctctggtggactggacagcaggaggcgaagcaggatttgctggagctgtc
tatggtggtggtggccagcaggctgaaaacaaacaaagcaaaagagaaatggaaagagat
attacacgtagtctcttttcgtcaagagtggctgagataaaggttaactggtttaagaac
agagatgaaatgcttgctgtgctgccaaaattggacagtagtttagaagagtatctgaac
ctgcaagagcagttgacagatgtagaaaagttgcaaggaaaactggtggaggagatagaa
tttctggaaggtgcagaaggagtggatcatccttcccacacgcttcagcacaggtattct
gagcacacacagttgcagtctcaacaaagagctgtccaggaagcaatccaggtgaagctg
aatgagtttgagcagtggataacacattaccaaactgctttcagtaatttggaggcaaca
caacttgcaagtcttctccaagaaattagcacgcaaatggacctaggtcctccaagttat
gtaccagcaacagcgttcctgcaaaatgcaggccaggcacatcttattagtcagtgtgaa
caactggaaggagaagttggtgcccttctccagcagagaaggtccgtgttacgtggttgt
cttgaacaactgcacaactatgcaacagtagctcttcagtatccaaaagctgtgtttcag
aagcaccgaatagagcagtggaaaacctggatggaagaactcatctgtaacatgacaatt
gagcgttgtcaggatatctttaggaagtatgaaatccaatatgctcctcaaccacctcca
agtatgtgtcagttcataactgctacagaaatgactctacagcgctatgcagcagatata
aataacagacttatcaggcaggtggagcgtttgaaacaggaggcagttactgtacctgtt
tgtgaagagcagctgaaagaaattgaacgttgcataaaagttttccttcatgaaaatgga
gaggagggctcgctgagcttagcaagcgttatcatctctgctctttgttcgctgacgagg
cgaaatctgatgatggaaggtgcagcatctagtgctggagagcaactggttgatttgact
tcaagagatggagcctggttcttggaggagctttgcagcatgagtgggaatgttacctgc
cttgtgcagttgctgaagcagtgtcatcttgtaccccaggacttagatattcctaaccca
attgaagcatcagaagctgtccacttagcaaatggagtatatatctcacttcaggaattg
aactcaaacttccgacagatcatttttcctgaagcgcttaggtgcttaatgaaaggagag
tatactttagaaagtatgctccatgaattagataatcttattgaacaaacaactgatgga
gtccctttgcaaacattggttgaatctcttcaagcctacttacgaaatgctgctatggga
ctagaggaagaaacacatactcattacattgatgttgcaagagtacttcatgctcagtat
ggtgagctgattcagccaagaaatggttcagttgatgaaactcccaaaatgtcagctggt
cagatgcttttggtagcctttgatggaatgtttgctcaagtggaaactgcatttggttta
ttgattgaaaagctaaacaagatggaaatacctgttgcttggcgtaagattgacatcatt
agggaagcccgcagcacccaagttaacttctttgatgatgacaataatcggcaagttcta
gaggaaattttctttctgaagagactgcaaacaatcaaagaatttttcaggctctgtggt
accttttctaaaacattgtcaggaatcagttcacttgaagaccagaatgcagtaaatgga
cctgttcagattgtcaatgtgaaagccctttacagaaactcttgttttagtgaagaccaa
atggccaaaccaatcaaggcttttacagctgactttgtgagacagcttttaattggcctt
ccaaatcaagctttgggacttactttgtgcagtttcatcagcgctttgggtgttgatatc
attgctcaggtagaggctaaagactttggagcggaaagcaaagtttctgtggatgacctg
tgcaagaaagctgtggagcacaatatccaaattggcaagttctcacagttggtcatgaac
agggcaacggtattagctagttcatacgatacagcatggaagaagcatgatctagtgcgc
agacttgaaaccagtatttcatcttgcaagaccagtcttcagagagtacagttgcatatt
gctatgttccagtggcagcatgaagatctcctaatcagtcgcccacaagctatttctgtt
agtcctccacctcgatctgcaattttagccagcatgaaaaagaaacttcacacgctcagt
cagattgaagcttcaattgcagcagtccaggagaaactagcagcacttgaagcaagtatt
gagcagcgtttaaaatgggcaggaggtgctaatcctgcactggcaccagtcttgcaagat
tttgatgccactattgctgaaagaagaaaccttgtactgaaagaaagtcaaagagcaagt
caggtcactttcctctgcagtaatatcattcattttgaaagtttacgtactagaacagca
gaagccttaaatcttgatgctgcattatttgaacttctgaaacgctgtcaacaaatgtgc
tcatttgcgtcacagttcaacagttcagtttctgagctggaacttcgcctgcttcagaga
gtgggcactggtcttgaacatcctattggcagctctgaatggcttcactcagctcacaag
cagttgacccaggaaatatctacacagagaacagtacaaacagaaagagaacagcaaata
gaaacagtttgtgaaacaattcagaatctggtggatagtattaaaactgtactcacgggt
cataacagacaacttggagatgtcaaacatctactgaaagctatggcaaaggatgaagaa
gcggctttggcagatggtgaagatgttccctatgagaatagtgttaggcagttcttgggt
gaatataaatcgtggcaagataatattcagacggttttgtttacattagttcaggttatg
ggtcaagtccgcagtcaggaacatgttgaaatgctgcaggaaataactcccaccttgaaa
gaactaaaaacacagagccaaagtgtctacaataatctagtgggttttgcatcaccctta
gtcacggatacatcaaatgaatgctcaagcccaacgtcagctgctacatatcagccaacc
tttgctgcagctgtacgtagcaatacagggcagaaaactcagccagaggtgatgtcacag
aatgcaagaaagctaattcagaaaaatcttgccacgtcagcagatactcctccaagcaca
gtcccaggaactggcaaaagtgttgcctgtagtcccaaaaagactgccagggacccgaaa
acaggaaaagctgtgcaggaaaggaattcatacgcagttagcgtgtggaagcgagtcaaa
gccaagttagagggccgagatgtggatcccaacaggagaatgtctgttgctgaacaggtt
gactttgtgattaaggaagcaactaatctagataacttggctcagctgtatgaaggttgg
actgcctgggtatga
DBGET
integrated database retrieval system
