Pelecanus crispus (Dalmatian pelican): 104024409
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Entry
104024409 CDS
T08340
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
pcri
Pelecanus crispus (Dalmatian pelican)
Brite
KEGG Orthology (KO) [BR:
pcri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcri03041
]
104024409 (DDX1)
03016 Transfer RNA biogenesis [BR:
pcri03016
]
104024409 (DDX1)
Enzymes [BR:
pcri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104024409 (DDX1)
Spliceosome [BR:
pcri03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104024409 (DDX1)
Transfer RNA biogenesis [BR:
pcri03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
104024409 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
104024409
NCBI-ProteinID:
XP_009487538
LinkDB
All DBs
Position
Unknown
AA seq
734 aa
AA seq
DB search
MGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYE
TLKDQMEGKKGKATIKTGGAVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRATR
GVTKGKYYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDSYGEEF
TMHDTIGCYLDIDKGQIKFSKNGKDLGLAFEMPPHIRNQALFAACVLKNAELKFNFGEED
FKFPPKDGYIGLCKAPDGSVVKSQHSGNAQVVQTQNLPNAPKALIVEPSRELAEQTLNNV
KQFKKYVDNPKLRELLIIGGVAARDQLSVLEQGVDIVVGTPGRLDDLVSTGKLNLSQVRF
LVLDEADGLLLQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSEKIMHFP
TWVDLKGEDSVPETVHHVVVLVNPKADKLWERLGKNHIRTDEVHAKDNTRPGANTPEMWS
EAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPDRKGHQFSCVCLH
GDRKPQERKQNLERFKRGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRV
GRAERMGLAISLVAKEKEKVWYHVCSSRGKGCYNTRLKEEGGCTIWYNEMQLLGEIEEHL
NCTISQVEPDIKVPVDDFDGKVTYGQKRALGGGLYKGHVDILAPTVQELAALEKEAQTSF
LHLGYLPNQLFRTF
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttatgccggagatagctcaggcagtggaggagatggactggcttcttcctaca
gatatccaagcagaatccatcccactgatcctcggaggtggtgatgtacttatggctgct
gaaacgggaagtggaaaaactggtgctttcagtattccagttatccagattgtttatgaa
acactgaaggaccagatggaaggcaagaaagggaaagcaactattaaaaccggtggggca
gtgctcaataaatggcagatgaacccatatgatagaggatcagcttttgcaattggatca
gacggtttgtgttgtcaaagcagagaggtaaaagaatggcatggatgcagagcaactaga
ggcgtgactaaaggcaaatactactatgaagtttcctgtcatgaccaaggcttgtgcaga
gttggttggtcaactatgcaggcttcactagatttgggcactgataaatttggctttggc
tttggtggcactggtaagaaatctcacaacaagcaatttgacagctacggtgaggaattc
actatgcatgatacaattgggtgttatctagacatagataaaggacaaataaaattttcc
aaaaatgggaaggaccttggccttgcgtttgaaatgccaccacacataagaaaccaagca
ctttttgcagcttgtgtactgaagaatgctgaattgaaattcaattttggtgaagaagac
ttcaagtttccaccaaaagatggctatattggtctttgcaaggctcccgatggtagtgtt
gtaaaatcacaacactcaggaaatgcacaagtggttcaaacacagaaccttccaaatgct
ccaaaagcgttgattgtagaaccgtcaagagagcttgcagaacaaactttgaacaatgtg
aagcagttcaaaaaatatgtcgataatcccaaattaagggagctgttgattattggtggg
gttgctgcaagagatcaactctctgtactggaacaaggagtggatattgtcgttggaact
cctggaagactggatgacctggtctcaacaggaaagcttaatttatctcaagttagattc
ctggttctggatgaagctgatggccttctcctccaaggttattcagatttcataaacagg
atccacagtcaaattcctcagataacttcagatggaaagaggcttcaggtgattgtgtgc
tctgcaacactacattcttttgatgtgaaaaaactatctgaaaagatcatgcattttccc
acctgggttgatttgaaaggagaagattctgtccctgaaactgtacaccatgtagttgtg
cttgtaaatccaaaagctgacaaactctgggaaaggcttggcaagaatcatatcaggact
gatgaagtacatgcaaaagacaatacacgacctggtgctaacactccagaaatgtggtct
gaagctattaaaattctaaaaggagaatatactgttcgggctatcaaagaacacaagatg
gaccaagccattattttctgcaggactaaaatagactgtgataatatggagcagtacttc
atccaacagggcggagggcctgataggaagggacatcaattctcatgtgtctgtctgcat
ggtgacagaaaacctcaagaaagaaagcaaaatctggaaagatttaagagaggagatgtc
cgtttcttgatctgcacagatgttgctgctagaggaattgatattcatggtgttccatat
gttatcaatgtcacgctccctgatgaaaaacagaactatgttcatcgaattgggagagta
ggcagagctgagaggatgggtctggcaatctcccttgtggcaaaagagaaagaaaaggtt
tggtatcatgtatgcagtagtcgtggaaaagggtgttacaatactaggctgaaggaggaa
ggaggttgtaccatatggtacaatgagatgcagttgctgggggagattgaagaacactta
aactgcactatttcccaagttgaaccagacataaaagtaccagtagatgattttgatggg
aaagttacatatgggcagaaaagagctctgggtggtgggctgtataaaggccatgtggat
attctggcacctacagtacaagagttggctgcccttgaaaaggaggctcagacatctttc
ttgcatcttggctatcttcctaaccagctgttcagaacattctga
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