KEGG   Pelecanus crispus (Dalmatian pelican): 104024468
Entry
104024468         CDS       T08340                                 
Symbol
COPB2
Name
(RefSeq) coatomer subunit beta'
  KO
K17302  coatomer subunit beta'
Organism
pcri  Pelecanus crispus (Dalmatian pelican)
Brite
KEGG Orthology (KO) [BR:pcri00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pcri04131]
    104024468 (COPB2)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pcri04147]
    104024468 (COPB2)
Membrane trafficking [BR:pcri04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    104024468 (COPB2)
Exosome [BR:pcri04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   104024468 (COPB2)
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR75_1st EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st NBCH_WD40 ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_SCAP PEP5_VPS11_N Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_SPT8 WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_LRRK2 Beta-prop_WDR35_TULP_N Clathrin HEAT_GCN1
Other DBs
NCBI-GeneID: 104024468
NCBI-ProteinID: XP_009490044
LinkDB
Position
Unknown
AA seq 912 aa
PLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVR
AAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDM
LIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTL
EGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPEL
PIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLGR
EEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQHN
PNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESNSVVKIFKNFKEK
KSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIAT
EESFFILKYLSEKVAAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSVN
RLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMRR
DFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKTAYQLA
VEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNANMVNKLAEGAEK
DGKNNVAFMSYFLQGKLDSCLELLIKTGRLPEAAFLARTYLPSQVSRVVKLWRENLSKVN
QKAAESLADPTEYENLFPGLKEAFVAEEYVKQSLADLRPAREYPLVTPNEERNLLEEAKG
FEPSGVMAPQKKAEEPVPSPKQEVMKTVLQNSDLLPTRDQKTLLDLEDDLDNLDLEDIDT
TDINLDEEILDE
NT seq 2739 nt   +upstreamnt  +downstreamnt
cctctccgacttgatataaaacggaaactaacagctcggtctgaccgggtgaagagcgta
gacttgcatcccacggaaccatggatgttggctagcctttataatggcagtgtctgtgta
tggaaccatgagacacagactctggtgaaaacttttgaagtgtgcgacctgccagtgaga
gcggccaaattcgtggcgagaaagaactgggttgttacaggagctgatgacatgcaaatt
agagtttttaattataacaccttggaaagagttcacatgtttgaagcacattcagattac
attcgttgtattgctgtgcatcccacgcagcctttcatactgacaagcagcgatgacatg
ctcattaaactctgggactgggataaaaaatggtcttgttctcaggtgtttgaaggacac
acccattatgtcatgcagattgtcataaacccaaaagacaataatcagtttgccagtgcc
tctttggatagaacaatcaaggtgtggcagcttggctcttcttcacccaactttactttg
gaaggccatgagaaaggagtaaactgcattgactattacagtggaggagacaagccatat
ctcatttcaggtgcagatgaccggctggttaagatctgggactaccagaataaaacgtgt
gtgcaaacactggaaggacatgctcaaaatgtgtcatgtgtcagcttccatcccgaattg
cctatcattatcacaggctcagaagatggaactgtgcgcatttggcattcaagcacttac
cgcctggaaagtaccctcaactacggtatggagagagtgtggtgtgtggccagtttaaga
ggatccaataatgtggctttgggatatgatgaaggcagcattattgttaagcttggtcgt
gaagaacctgccatgtctatggacgcaaacggcaaaattatttgggctaaacattcagaa
gtccaacaggctaacttgaaagctatgggagatgctgaaatcaaagacggagaaagattg
ccactggctgtaaaggatatggggagctgtgaaatctatcctcagacaattcagcacaac
cctaatggacggtttgtagtagtgtgtggtgatggtgaatacatcatttacacagctatg
gctttgagaaacaagagctttggttctgcacaggagtttgtatgggcacatgattcttca
gaatacgcaatcagggagagcaacagtgttgtaaagatatttaaaaatttcaaagagaag
aagtcattcaaacctgattttggagcagaaggcatctatggtggtttcctgttgggcgtc
agatctgttaatggtttggcattctatgattgggaaaacacggaattgattcgcagaatt
gaaattcagcccaaacatattttctggtctgactcgggtgagcttgtctgcattgctacg
gaagagtcgttcttcattctgaaatacctatcggaaaaagttgcagcagcccaagaaaca
cacgaaggtgtcactgaagatggaattgaagatgcttttgaggttcttggtgaaattcag
gagattgtgaaaacaggcttgtgggtaggcgactgctttatttacaccagttctgtgaac
agactcaactactatgttggaggagaaattgtcactattgcccatttagacaggacaatg
tatcttttgggatatatccctaaggacaaccgactttatttgggtgataaagagctaaac
atcgttagctactctttgctggtctcagtgcttgaatatcaaactgctgtgatgagaaga
gatttcagtatggctgataaagttcttcccacaattccaaaagaacagagaaccagagtt
gcacattttcttgaaaaacagggcttcaaacaacaagctcttgcagtatctacagatcca
gaacatcgttttgaacttgctcttcaacttggagaattaaaaacagcctatcagcttgca
gtggaagcagagtcagaacagaaatggaagcaacttgctgagcttgccattagtaaatgc
cagtttggcttagcccaggagtgtctccaccatgcacaagactacggaggactgctgctc
ctggctacagcttcaggaaacgctaacatggtgaataagttagctgaaggagcagaaaaa
gatggcaagaacaatgttgcatttatgagctacttcctgcagggaaagcttgattcatgt
ttggaactcctgattaaaaccgggcgtctcccagaagctgcttttcttgcacggacatat
ttgccaagccaagtttcaagggttgttaaactgtggcgggagaatctctctaaagtcaat
caaaaagctgctgagtcccttgctgatcctacagaatatgaaaatcttttccctggatta
aaggaagcttttgttgctgaagagtatgttaaacagagtctcgctgacttgcggccagcc
agggaatacccccttgtcactccaaatgaagaaagaaacttacttgaagaagcaaaaggc
tttgagccttctggagtaatggcacctcagaagaaggctgaagaaccagttccatctcct
aaacaagaagtgatgaagacagttttgcagaattctgatctacttccaacaagagatcaa
aagacactgctggacttggaagatgacttagataacttggatttggaggatatcgatacc
acagatatcaatctggatgaagagatcttagatgagtga

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