KEGG   Pelecanus crispus (Dalmatian pelican): 104024546
Entry
104024546         CDS       T08340                                 
Name
(RefSeq) DNA ligase 3-like
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
pcri  Pelecanus crispus (Dalmatian pelican)
Pathway
pcri03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pcri00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    104024546
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pcri03400]
    104024546
Enzymes [BR:pcri01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     104024546
DNA repair and recombination proteins [BR:pcri03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     104024546
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N zf-PARP DNA_ligase_A_C RNA_ligase Synaptonemal_3 mRNA_cap_enzyme aRib DUF3802
Other DBs
NCBI-GeneID: 104024546
NCBI-ProteinID: XP_009488801
LinkDB
Position
Unknown
AA seq 663 aa
MAEQRYCVDYAKRGTAGCKKCKEKIVKGMVRIGKIVPNPFTESGGDMKEWYHVKCMFEKL
DKARATTKKIEDITDLEGWEELQDGEKELINKHISEANSKAAGTPKKKVIVQAKLTATGQ
ITTKDPLALISPSPKKFSGFTAKPKNSEEVSANSSHKSSLSAKKCDPKHKDCLLREFRKL
CAMVAEKPSYNVKTQIIQDFLKKGSGGDGFHGDVYLTIKLLLPGVIKIVYNLNDKQIVKL
FSRIFNCSQEEMIRDLEQGDVSETIRLFFEQSKSCPPAAKSFLTIQEVDEFLIQLSKLTK
EDDQQSVLQHITRRCTGNDLKCIIRLIKHDLKMNAGAKHVLDALDPNAYEAFKASRNLQD
VVERVLKNQQEAEKMPGLKRTLSVQASLMTPVQPMLAEACKSIEYAMKKCPNGMYAEIKY
DGERVQVHKNGDHFSYFSRSLKPVLPHKVAHFKDFIPQAFPGGQSMILDSEVLLIDNKTG
KPLPFGTLGVHKKAAFQDANVCLFVFDCIYFNDISLMDRPLCERRKFLHDNMVEIPNRIL
FSEMKHVTKASDLADMITRVIREGLEGLVLKNIKGSYEPGKRHWLKVKKDYLNEGAMADT
ADLVVLGAFYGQGSKGGMMSIFLMGCYDPKSEKWCTVTKCSGGHDDATLARLQTELDMVK
ISK
NT seq 1989 nt   +upstreamnt  +downstreamnt
atggcagaacagaggtactgcgtagactatgccaagcgtggcacggcaggctgcaagaag
tgcaaggagaagatcgtgaaaggaatggtgcgcattggaaagattgttcccaatcccttc
acggagtctggcggggacatgaaggagtggtaccatgtgaagtgcatgtttgagaagcta
gacaaggcccgggccaccaccaagaaaatcgaagacatcacagacttggaagggtgggaa
gagctacaagatggggagaaggaattaatcaacaagcacatctcggaagctaattccaag
gctgcaggtacaccgaagaaaaaagtgatagtccaagctaagctcactgccacaggacaa
ataaccacaaaagatccattggctctcatcagtccatcaccgaagaagttctctggcttc
acagccaagccaaagaattcagaagaagtctctgcaaactcttcccacaagtctagccta
tctgcaaaaaaatgtgatccgaagcacaaagactgcttgctgcgagagttcaggaagctc
tgtgccatggttgctgaaaagcctagctataacgtgaaaacacagatcatccaggatttt
ctgaagaagggatctggaggagatggttttcatggtgacgtatacctgaccattaagctg
ctgttaccaggcgtcattaaaattgtttacaacttgaatgataagcagattgtaaagcta
tttagtaggatttttaactgcagccaagaagaaatgatccgggacctggaacagggagat
gtttccgagaccatacgtctcttctttgaacagagcaagtcttgtcctccagcagccaaa
agtttcctgaccatccaagaggtagatgaattcctaatccagctatcaaaacttactaag
gaggatgaccagcaaagtgtgctgcaacatatcactcgcagatgtacagggaacgacctg
aaatgcatcatcaggctaattaagcatgacttgaaaatgaacgctggagcaaagcacgtg
ttggatgctttggatcccaatgcttatgaggcgttcaaagcatcacgcaacctccaggat
gtggtagagcgagtcctgaagaaccagcaggaggctgagaagatgccaggtctgaagcga
accctcagtgtgcaggcctctctgatgaccccggttcagcccatgctggctgaagcctgc
aagtcaattgaatatgccatgaagaagtgcccaaatggcatgtatgcagaaatcaaatat
gatggcgagcgggtgcaggtccataaaaatggagatcatttcagctacttcagcagaagc
ctcaaacctgtcctccctcacaaagtagcccattttaaggacttcatcccccaggctttc
cctggtgggcagagtatgatcctggattcagaagttcttctgattgataacaaaactggc
aagccacttccttttgggactcttggtgtgcacaagaaagctgctttccaagatgccaat
gtttgcttgtttgtgtttgactgcatctatttcaatgacatcagcctgatggacaggcct
ttgtgtgaacgtcgtaagtttctccacgataacatggttgaaatccccaaccggatcctc
ttctcggagatgaagcatgtcacaaaagcttcagatctggcagatatgatcacccgagtc
atccgtgagggactggaaggactggtgttgaaaaacataaagggtagttatgaaccagga
aaacgacactggctgaaagtgaaaaaggactacctaaatgagggtgcaatggctgacaca
gcagacctggtggtgctgggagctttctatggacaaggcagtaaaggtgggatgatgtcc
atcttcctcatgggctgctatgatcccaagagcgagaagtggtgcactgtgaccaagtgt
tccggtggccatgatgatgccaccttggcgcgcctgcaaacagagctggatatggtgaag
atcagcaag

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