KEGG   Pelecanus crispus (Dalmatian pelican): 104024606
Entry
104024606         CDS       T08340                                 
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
pcri  Pelecanus crispus (Dalmatian pelican)
Pathway
pcri03030  DNA replication
pcri03410  Base excision repair
pcri03420  Nucleotide excision repair
pcri03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pcri00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    104024606 (RFC4)
   03410 Base excision repair
    104024606 (RFC4)
   03420 Nucleotide excision repair
    104024606 (RFC4)
   03430 Mismatch repair
    104024606 (RFC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pcri03032]
    104024606 (RFC4)
   03036 Chromosome and associated proteins [BR:pcri03036]
    104024606 (RFC4)
   03400 DNA repair and recombination proteins [BR:pcri03400]
    104024606 (RFC4)
DNA replication proteins [BR:pcri03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    104024606 (RFC4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    104024606 (RFC4)
Chromosome and associated proteins [BR:pcri03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    104024606 (RFC4)
DNA repair and recombination proteins [BR:pcri03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     104024606 (RFC4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    104024606 (RFC4)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_assoc_2 Rad17 AAA_16 AAA_22 AAA_30 AAA_11 DUF815 Mg_chelatase AAA_24 AAA_14 DNA_pol3_delta SLFN-g3_helicase AAA_28 RuvB_N AAA_19 AAA_5 TIP49_C bpMoxR AAA_23 AAA_3 AAA_7 ResIII
Other DBs
NCBI-GeneID: 104024606
NCBI-ProteinID: XP_009489921
LinkDB
Position
Unknown
AA seq 365 aa
MQAFLKGPSSISTKPPAAKERGAAGAAGSSGEGKRLKPIPWVEKYRPKNVDEVAFQDEVV
AVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELYGPELFRQRVLELNASDERGIQVI
REKVKAFAQLTATGSRSDGKVCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLI
CNYISRIIEPLTSRCSKFRFKPLSDKIQQQRLLDVSEKEHVKISSEAVSYLVKVSEGDLR
KAITFLQSATRLMGGKEITEKIVTEIAGVIPKETTDELLSVCQSGSFEKLEMLAKNLINE
GYAVAQLVNQLHDTVVESEDYSDKEKSVIVEKLAEVDKCLADGADEYLQLMGLCALVMQQ
LTQNT
NT seq 1098 nt   +upstreamnt  +downstreamnt
atgcaggccttcctcaaaggcccgtcttccatcagcaccaagccccccgctgccaaggag
aggggtgcggccggcgcagcggggagcagcggggagggcaagaggctcaaacccatcccc
tgggtggagaaatatcggcccaaaaatgtggatgaagttgccttccaggatgaagttgtt
gctgtgctgaaaaagtccttggaaggtgctgatcttcccaatctgttgttctatggccca
cctggaactggaaagacttctactattctagcagctgctagagaactctatgggcctgaa
ttattccggcaaagagtccttgagttaaatgcttctgatgagcgtggaatacaagtgatt
cgggaaaaagtgaaggcttttgctcagctaactgcgactggaagccgttcagatggtaaa
gtttgtcctccttttaaaattgtaatcctggatgaagcagattcaatgacttcagcagcc
caggcagccttaagacgcacaatggaaaaagaatccaaaacaacacgtttctgccttatt
tgtaactacatcagcagaataattgaacccttaacatctcgatgctccaaattccgcttc
aagcctttgtcagacaaaatccaacagcagaggctattggacgtttctgagaaggaacat
gtgaaaatcagtagtgaggcagtatcttaccttgttaaagtatcagaaggggacttaaga
aaagcaattacttttcttcaaagtgccactcgcctaatgggtgggaaggagatcacagag
aagatagtcactgaaattgctggggtcatccctaaagaaacaactgatgagctgctatct
gtctgccagagtggttcgtttgaaaaactggaaatgctggcaaagaatctcataaatgaa
gggtatgctgttgctcagcttgtcaaccagctgcacgatactgttgttgagagcgaagat
tacagtgacaaggagaaatctgtcatagttgagaaacttgcggaagtagacaaatgcttg
gctgatggcgctgatgaatacttgcagttgatgggcctctgcgcccttgtgatgcagcag
ctaacgcagaacacctaa

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