Pelecanus crispus (Dalmatian pelican): 104025346
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Entry
104025346 CDS
T08340
Symbol
DDB2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
pcri
Pelecanus crispus (Dalmatian pelican)
Pathway
pcri03420
Nucleotide excision repair
pcri04115
p53 signaling pathway
pcri04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pcri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104025346 (DDB2)
09124 Replication and repair
03420 Nucleotide excision repair
104025346 (DDB2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
104025346 (DDB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcri04121
]
104025346 (DDB2)
03400 DNA repair and recombination proteins [BR:
pcri03400
]
104025346 (DDB2)
Ubiquitin system [BR:
pcri04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
104025346 (DDB2)
DNA repair and recombination proteins [BR:
pcri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
104025346 (DDB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_NUP159_NUP214
PEP5_VPS11_N
Beta-prop_Vps41
Beta-prop_TEP1_2nd
Beta-prop_WDR35_TULP_N
DUF3965
Motif
Other DBs
NCBI-GeneID:
104025346
NCBI-ProteinID:
XP_009479357
LinkDB
All DBs
Position
Unknown
AA seq
512 aa
AA seq
DB search
MAPVNQPKGKKHERTHEHWPEGAKSAGKRKPDYEELGNEPQAKKLFVRKTSKPPEKIGWS
GGGSVVRNKRVHQLERQCSIVHYVYQNMLGGSIRAQLRQRLQLPFLRSLASYRLFRTASP
FDRRVTCLEWHPTHPSTVAVGSKGGDIILWDYEVLTKTCFIKGKGPGDSLGDIKFSPYEA
VKLYVASGDGTLSLHDLEGRAVQVISCVPDCGHEYHNVCCWYCSVDVSASCRAVVTGDNV
GNVVLLSTSGEEIWKLKLHRKKVTHVEFNSRCEWLLATASVDQTVKIWDLRNIKNKTNCL
HVLPHGKPVNAAYFSPTDGAKLLSTDQRNEIRVYSSSDWTKPQHLIPHPHRQFQHLTPIK
ATWHPRYDLIVAGRYPDPKFPGYTVNELRTVDVFDGNTGEMVCQLHDPNASGIISLNKFN
PMGDTLASGMGFIILIWSRAEMVAKKQEHLLKAMTEQGIGSWSLSRRRGQRQANPGTSKL
KANLLSWEQEEMRTKTNSKSQGRKRKGKDLEN
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggctccagtgaaccagccaaagggcaagaagcatgagaggacgcatgagcattggcca
gaaggggcaaaatcagctgggaagaggaaaccggactacgaggagctagggaacgagcca
caggcaaagaagttgtttgtgagaaaaacatccaaacccccagagaaaatcggttggagt
ggaggtgggtctgtggtgagaaacaagagagtccatcagctggagcggcagtgcagcatt
gttcattatgtctaccagaacatgctgggaggctccattcgggcacagctcaggcagcgt
ctacagctgccctttctgcgttctctcgcctcataccgcctctttcgaacagcaagtccc
tttgacaggagagtgacatgcctggaatggcatccgacacaccccagtactgtagctgtt
ggttccaaaggtggagatatcatcctttgggactatgaagtacttactaaaacctgcttc
ataaaagggaaggggccaggagattctcttggagacataaagttcagtccttatgaggca
gtgaagctttatgtggcatccggggatggcaccctaagtctgcacgaccttgagggcaga
gcggtgcaggtgatctcctgtgtcccggactgtggccacgagtaccataatgtttgttgc
tggtactgcagtgttgatgtttctgcaagctgccgtgcagtggtgacaggtgataatgtg
ggcaacgtggtcctgctcagcacttccggtgaagagatttggaagctgaaattgcacagg
aagaaagtcactcatgtggaatttaactcccgatgtgagtggttgttggccacagcatct
gtggatcagacagtcaaaatctgggacctcagaaacatcaaaaacaaaacaaattgtctt
catgtgcttcctcatggcaaacctgtcaatgcagcttacttcagcccaacagatggtgcc
aagctcctgagcacagaccagcgcaatgaaatcagggtttactcatcttcagactggacc
aagccacagcatctgatcccacatccacatcggcagtttcagcacctcacacctattaag
gcaacatggcatcctcggtatgacctcattgtagcaggtcgctacccagaccctaagttc
ccagggtacacggtgaatgagctacggactgttgatgtattcgatggaaacactggggag
atggtttgtcaactccatgatccaaatgcttctggtatcatctcgctcaacaaatttaac
cctatgggagacacactagcttctggcatgggctttattattctgatctggagccgggca
gagatggtggccaagaagcaagaacatcttttgaaagccatgacagaacaggggattgga
agctggagtttgtccagacgcagagggcagaggcaggcaaaccctgggacaagcaaactc
aaagctaacttactgtcttgggagcaggaggagatgagaacaaaaaccaattctaaatca
cagggaaggaagcgaaaagggaaggatctagagaactga
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integrated database retrieval system
