Pelecanus crispus (Dalmatian pelican): 104025693
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Entry
104025693 CDS
T08340
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
pcri
Pelecanus crispus (Dalmatian pelican)
Pathway
pcri03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pcri00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
104025693 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pcri01009
]
104025693 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcri04515
]
104025693 (PCDH20)
Protein phosphatases and associated proteins [BR:
pcri01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104025693 (PCDH20)
Cell adhesion molecules [BR:
pcri04515
]
Cadherins
Protocadherins
104025693 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
104025693
NCBI-ProteinID:
XP_009488716
LinkDB
All DBs
Position
Unknown
AA seq
900 aa
AA seq
DB search
HLLLFLLFVGPFNCFASYSRATELFYSLNEGLPAGVLIGSLARDLRLPTAGGQHPAAPQP
ALSFTLASRGLGGQYVQLDNRSGELHTSAVEIDREALCVESSGATVFGGAAAVSSSSSSP
SSESCLLLLDVLVLPQEYFRLVKVKIAIRDVNDNAPRFPVPHIHLSVPENAPVNTRLAIE
HPALDPDVGTNSVQTYRLQDNYGVFTLDVEENESGERTPYLIVMGALDRETREEYVTVIV
AEDGGTPPLVGSATLTIGISDINDNCPQFSDSQLNITLYGNSSLGTHVATVHAVDMDLGS
NAQITYSYSQKVPQSSRDLFHLDESTGTITLSSTVDGDTPRLHRLIILGNGPGCIPAVIT
VLVTIIKVMMRPPEVVPRFIANEAEGVVYLKELEPINTPIAFFTIKDPDEKYKVNCYLDG
DGPFRLSPYKPYNNEYLLETTKPLDYETQQLYEISVVAWNSEGFHVNKIIKIQVLDDNDN
SPVFSQQLIELSIEENNVPNAFLTKLHATDADSGERGQVSYFLGPDAPSYFSLDKTTGVL
TVSTQLDREEKEKYRYTVKAVDSGFPPRESIATVTITVLDKNDNSPRFINKDFSFFVPEN
FPGFGEIGVISVTDADAGQNGWVALSVLNGSDIFVIDTGKGVLRAKVSLDREQQSSYILW
IEAVDGGDPALSSTAKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSPITEVYAVD
KDTGMNAVIAYSIIGRRGPRPESFRIDSKTGNITLEESLMQNDYGLYRLLVKVSDHGYPE
PLHSTIMVNLFVNDTVSNESYIESLLRKEPDISIEEKQPQISIEPTHKKMESASCMPTLV
ALSIISLGSIALVTGMGIYICLRKGKKHHRADENLEVQIPLNGRINLHMLEKKPMEISNI
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
cacttgctcctcttcctgctcttcgttggacctttcaactgctttgccagttacagccgg
gccactgagctcttctacagcctcaatgaggggctgcccgctggggtgctcattggcagc
ctggcccgtgacctgcggctgccgacggctggtgggcagcaccctgcggccccccagccc
gcactctccttcaccctggcctcccgtggcttggggggacagtacgtgcagctggacaac
cgctctggagagctgcacacctcagccgtggagatcgaccgggaagctttgtgtgtggag
agcagcggggccaccgtctttgggggagcagctgctgtgtcctcctcctcctcctcaccc
tcatccgagtcatgcctgctgctgctggatgtgctggtgctgccgcaggagtacttccgc
ctggtgaaggtaaaaattgctatccgggatgtcaacgacaacgcaccccgcttccctgtg
ccccacatccacctctcagtgcctgagaatgcacctgtgaacacccgcctggctattgag
caccccgcccttgaccctgacgtgggcaccaacagcgtccagacctaccgcttgcaagat
aactatggtgtcttcaccctggatgtggaggagaatgagagcggggagaggactccctac
ttgattgtcatgggggctctggacagggagacacgggaggagtatgtcacagtcattgtt
gctgaggatggggggactcctccacttgtgggcagtgccaccctcactatcggcatcagc
gacatcaatgacaactgcccccagttcagtgactcgcagctcaacatcactctttatggg
aattccagtctagggacacacgtggccactgtccacgcagtagacatggaccttggatcc
aatgcccaaatcacctactcctacagccagaaagtcccccagtcatccagagacttgttc
catctggacgaaagcacaggaaccatcacgctctccagtacagtcgatggggacactcca
aggctccacaggctgatcatacttggcaacggtcctggttgtatccctgctgtgatcaca
gtgctagtgaccatcatcaaagtcatgatgaggccacctgaagttgtccctcgtttcata
gctaatgaagcagaaggggtggtgtacttaaaggaactggagcctatcaacacaccgata
gcattttttaccatcaaagaccctgatgaaaaatacaaagtcaattgctatttggatggt
gatgggcctttcagactttcaccatacaagccgtacaataatgaatacctgttagagacc
acaaagcctttggactatgagacacagcagctgtatgaaatctctgtagttgcgtggaac
tcagaaggatttcatgtcaacaaaataatcaaaatacaggttctggatgacaacgacaac
tcaccagttttctctcaacagctgatagaattatccattgaggagaacaatgttcccaac
gctttcttgaccaaactgcatgctacagatgctgacagcggagaaagagggcaagtgtcc
tattttttagggcctgatgccccttcgtatttttctttagataaaaccacaggagttctt
acagtttccacccagctggacagagaagaaaaagaaaaatacagatacacggtcaaagca
gtagattctggcttccctccaagagaatcaatagcaactgtcaccatcactgtattggat
aaaaatgataatagcccaaggtttatcaataaggatttcagctttttcgtgccagaaaac
tttccaggttttggtgaaattggagttataagtgtcacagatgctgatgcagggcaaaat
ggatgggttgccctttcagttctgaatggaagcgatatttttgtcatagatactggaaaa
ggagttttgagagctaaagtctccctggacagggaacagcaaagctcctacattctatgg
attgaagcagttgatggtggtgatcctgccctctcctctactgcaaaaataactatcctt
cttctggacataaatgacaaccctcctttggtcttgtttcctcagtctaatatgtcttat
ttgttggtccttccttccacccttcctggctctcccatcactgaggtctatgctgttgat
aaggacactggcatgaatgcagtcatagcttacagcatcataggaagaaggggccctcga
ccggagtcatttaggattgactctaaaaccggtaatatcaccttggaagagtcactgatg
caaaatgactatggcctctatcggctgcttgtaaaagttagtgatcatggctatccagaa
cctctccattccaccatcatggtgaaccttttcgtcaatgacactgttagcaatgagagc
tacattgagagtttgttaagaaaggagcctgatatcagtatagaagaaaagcaaccgcaa
atatccatagagcctacacataaaaaaatggagtcagcatcctgcatgcctacattggta
gctctgtcaataataagcttgggttcaatcgctttagtaacagggatgggcatttacatc
tgtctaagaaaaggaaaaaagcatcacagagcagatgaaaacttggaagtacaaatccca
ttaaatggaagaattaacctgcacatgttggagaagaaaccaatggagatttctaacatt
tga
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