Pelecanus crispus (Dalmatian pelican): 104026300
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Entry
104026300 CDS
T08340
Symbol
OPTN
Name
(RefSeq) optineurin isoform X1
KO
K19946
optineurin
Organism
pcri
Pelecanus crispus (Dalmatian pelican)
Pathway
pcri04137
Mitophagy - animal
pcri04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pcri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104026300 (OPTN)
04137 Mitophagy - animal
104026300 (OPTN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcri04131
]
104026300 (OPTN)
Membrane trafficking [BR:
pcri04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
104026300 (OPTN)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
104026300 (OPTN)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
104026300 (OPTN)
Xenophagy
Cargo receptors
104026300 (OPTN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CC2-LZ
NEMO
zf_C2H2_10
DUF6439
EDR4-like_1st
Motif
Other DBs
NCBI-GeneID:
104026300
NCBI-ProteinID:
XP_009484010
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MSSKLKSRPAFCPRSTMENGTDSVAATALSTYTPEEMVQQMKELITENNDLKEAMKLHNQ
AMKDRYEELSIWREKQKEEREFYELKFKEAKECLLAKCIENEQLQQQLQSLKEREEGAEM
EGCMAPEKEVRQLKSQVQRLQAEKADLLAIISELQVKLNISSAEDSFVEIGMNEGEITRT
AKEHQENGGEMTSNVAIYMSKPADELKNLESEELTVSQLLCCLRNETQRREKLEKELQDH
KERLSKLEKETCLESGTQTEQEEEESSEAVGSEVETLNLQVCALFKELQEAHEKLKEAEL
IQKKLQEKCQVLERKSSAAASELEEKQQLIYTIKKLELQVESMQAELKLEQAKTHEEKAR
FSSLQDAYNKLLPELTEAMKTIDEMKLKELDRVDKVVVEQLNAKVELAEQALAAKQLHID
EMKQIIAKQEEDLETMAVLRAQMEVYCSDFHAERAAREKIHEEKEQLAVQLAYLLKEQQN
LEDLGRNSLAEMQNRHGARAPDREHSPRLVQRGTGSQDWPEQRNISMYSCPKCEEILPDL
DTLQIHVMDCIN
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaagttgaagagccgtcctgctttttgtcccaggagtacaatggaaaacgga
acggacagtgtggctgccactgcccttagtacctacaccccagaagagatggtacaacag
atgaaagaactgatcaccgagaacaatgacttaaaagaagccatgaagttgcataaccaa
gctatgaaggaccgatatgaggaactttccatctggcgagagaagcagaaagaagaacga
gaattttacgagttaaagtttaaggaggctaaggagtgcttgctagccaagtgcattgaa
aatgaacagctacagcaacaacttcagagcttaaaggaaagagaagaaggagctgaaatg
gagggatgcatggctcctgagaaggaagtgaggcagctgaaatcccaggtgcagcggctc
caggctgagaaggcagatctgttagccatcatttcagaactgcaggtcaagctgaacatc
tcctcagcagaggattcctttgtggagattgggatgaacgaaggagaaataactagaact
gcaaaggaacatcaagagaatggtggtgaaatgaccagtaacgttgctatatatatgagc
aaacctgcagatgaattgaagaatttggagtctgaggagctaactgtgagccagctgctc
tgctgccttagaaatgaaactcagaggagggaaaaacttgagaaggagctgcaggatcac
aaagagagactgtcaaagctggagaaggaaacctgcctggagagtgggacacaaactgaa
caggaagaagaggagagttcagaggctgttggcagtgaagtagaaaccctgaatttgcaa
gtttgtgctctgttcaaagagcttcaggaagcccatgagaagttaaaagaagcagaattg
attcagaagaagcttcaagaaaagtgccaagtactggaaagaaaaagctcggctgctgca
tcagaattggaggagaagcagcagctaatatacaccatcaagaagctggaacttcaggtg
gagagcatgcaggcagagctcaagctggaacaagccaagacacatgaagaaaaggcaaga
tttagtagcttgcaggatgcatacaacaaactccttcctgaactcaccgaggcaatgaaa
acaattgatgaaatgaaactcaaagagctggacagagtggataaagttgtggtggaacaa
ctgaatgcaaaggtggagttggcagaacaagcccttgctgcaaagcagctccacatagat
gaaatgaaacagataattgctaagcaagaggaggaccttgaaaccatggctgtgctccgt
gctcagatggaggtttattgttctgacttccatgctgagagggcagcaagagagaagatc
catgaggagaaggagcagttggctgtccagctggcatacctgctaaaagagcagcaaaac
cttgaagatcttggccgaaactctttggcggagatgcagaatcgccacggagccagggcg
ccagatcgggaacactcacctcgccttgtccaaagaggaaccggtagtcaagactggcca
gagcagcggaatatctccatgtattcatgtcccaaatgtgaagaaattctacctgatttg
gatacactgcagattcacgttatggactgcattaattga
DBGET
integrated database retrieval system