Pelecanus crispus (Dalmatian pelican): 104026883
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Entry
104026883 CDS
T08340
Symbol
SLX4
Name
(RefSeq) LOW QUALITY PROTEIN: structure-specific endonuclease subunit SLX4
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
pcri
Pelecanus crispus (Dalmatian pelican)
Pathway
pcri03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
104026883 (SLX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcri04121
]
104026883 (SLX4)
03400 DNA repair and recombination proteins [BR:
pcri03400
]
104026883 (SLX4)
Ubiquitin system [BR:
pcri04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
104026883 (SLX4)
DNA repair and recombination proteins [BR:
pcri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
104026883 (SLX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slx4
BTB
B129_C2H2-zf
zf-C2H2_jaz
zf-C2H2
zf-C2H2_4
Zn-C2H2_12
Motif
Other DBs
NCBI-GeneID:
104026883
NCBI-ProteinID:
XP_009487346
LinkDB
All DBs
Position
Unknown
AA seq
1744 aa
AA seq
DB search
MDEQDNDFKELWANLLGRAKKKAGDAEAAKRAQNRSKSTAARSKLRRGKAAAKSQNHHHL
PAAKETNLPQDLGPQEQTFVHKEDGDAVACSSGETAQGDGIRNPFPASQLSAVASECSQR
TLTVNTLSRCSQSTLSFHPATQPGTCSSPTSKIPPLAGLKMRVAELVVERMQQFKRVAPE
QLKHSTDDSLPKSVASVDFPDGSQEQNPPENDTHRLPSMEHDSALALALQQETKEEALAS
LEDAGLFFCQICQKDLSAMNTTRREQHVNRCLDEMEEAQMSSSSKPLVPECPICGKRFQT
PQSRVSHLKRCAIEMDVPPKLLLQAVQLQVSSLGDAPLQCPSNQPSRSKRKGSSEEGSKK
MQKRAKLETKDEDLLVAMAMSRSLLEQEKQEQAKSVTNVKPVAALPIKWKPGSEKKRRKR
GPTAPPPLLLQNPEKARKRIQERVAMLLAEEVEFPPTPRLPNSRILEDESGKATWLLPLS
KNRECFLWNISALTGSYDPESFYTTGLTPPIVPWKPVQSSLRLLAEDFSAMVNNPHLSDV
QFQVDSGEVLYAHMFVLYARCPQAIQVVHSQGFLVEEDGNAQTRRVLLSXFLRYLYAADA
DIPAGVLPQVGALAARFGMKELMAKCENNTGESQVSSGVDSEDDLISVRDDKDCEDRAEN
FEDLLKSVWVGEDEEEVAMLNPECQKEDDNGVGEQELEEIYEFAATQRKMVQGETEVSEG
TDCSICSDTEAAQGTNQQTEEEEVKRSESALISNSFKDLRDGNDVERSKYDSSAQEEKMQ
NINRCKSVNDPQTTFVSHHSEPQKWDIASHGATVNEGETARRCEGVKDSKPSQVSDDKAG
HCEKQFPSFHGDTNINESYERLFSATQGDYCEPSPMKEVIKESGKAPSEKHVDVNDSLPY
SKSQKDLSPHRNGFYGSPPPKPYVPLFPAVGSSPASPKSERKFAGEHVSTPKQNKKEKSF
PSDKIHFQKANELDTASGNENTISPEELPHIDLNKHTYAPVVSSLVIRTQGAAAQGKKEG
DVIVLSSDDEIELQQDKKSPESGSALNKMEISGQLKCTNIEQGPEIPKPEHNSSVTETEQ
RSTQVSCGITDIVHVSNEVKMSTELPLSRQIEACTESKQGPKLNPEKRLSHEMSSGTDSS
WLVPDTPVLSKSRSFSTQTQVTSINSLKSPGSKLSTKNLAASNSNHEMTGNSIKVHETTL
SDEHLPMENSVSERSPSSSPAIGSFSQNSPPVSPVDLVLLSPGHINIESKCAKISFLSNP
VPPCHEQSLEDKTSISVVEVEDSEKEISLPSLSSSVLLCGEPPIPVDDCWHVEYLSPVRG
NSQDFNQVSRAKISTASSPRPGSWHDQWESPVHAQEIKGSTPLRGSPVGRRTTLLCPEKS
PIEACSSVGSRLSYLNSKIWDDWNGEEEEDEFPEMLPLSQRLSAAAGSCQTDAVKTPEPS
YQENDKPPSTPMTPMPAYSIMETPQLKKELSRFGVRALPKRQMVLKLKEIFQYTHQDVDS
DFEDEIPSSQPPLQKSPAKRSRQSKADRTAGGKRANASRAVGKRKQVATASSVLPVGRAD
DDLVGCRETGCAAPKEGTKMTHDPEGAKEQKRSSVSPERWSLAADGEEPMLSASQESAVS
SVDGSDISFGSQSSFMNGFEACAFASEEEEEELPASQAAAQEEDKLEAVRCYIRSNTALY
HKILFYEPIELAELHTELKQNGIKISKAKLLDFLDAHCITFTTAGARKEKEQKRKGNKKQ
RRRY
NT seq
5235 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacaggacaatgattttaaagagttgtgggcaaatcttttgggtagagcaaag
aaaaaagctggggatgctgaggcagcaaagagggctcagaacaggtcaaaaagcactgca
gcaagaagcaaattaagaaggggcaaagctgctgctaagagccaaaaccatcatcactta
ccagcagcgaaggaaacaaacttgcctcaagatttgggtccacaggaacaaacatttgtg
cacaaagaagatggtgatgctgtagcctgtagtagtggtgagactgcacaaggggatgga
ataagaaaccctttccctgccagccagctgagtgcagtggccagtgagtgtagccagagg
accctgacagtaaatactctgagtaggtgttcccagagtacgttatccttccatcctgct
acgcagccagggacctgctcttcacccacctcaaagataccaccgctcgcagggttgaag
atgcgggtagcagagctggtagtggaaagaatgcagcagttcaagagagtggcacctgag
cagctaaaacacagcacagatgatagcttgccaaagtctgtagccagcgtggatttccct
gacggaagccaggagcagaatccaccagagaatgatacccaccgtcttccatccatggag
catgacagtgctctggctttggctcttcagcaggaaaccaaagaggaagccctggcaagc
ctagaggatgcaggcttgtttttctgtcagatctgccagaaggatctctcagccatgaac
acaacacgacgagagcagcatgttaacaggtgtctggatgagatggaagaagcgcagatg
tcatcctccagcaaaccactggtccctgaatgtcccatctgcgggaagcggttccaaacc
ccacagagccgagtcagtcacttgaaacgctgtgctatcgagatggatgttcctcctaag
ctgcttcttcaggcagtgcagttgcaggtgtcctcacttggtgatgcacctcttcagtgt
cccagcaatcaaccaagcaggtcaaagcgaaaaggctcctccgaagagggctcaaagaaa
atgcagaagagggccaaattggagactaaggatgaagatttgctggttgctatggcaatg
tcacgctctctgttggagcaagaaaagcaggaacaagcaaaatcagttacaaatgtgaaa
ccagtggctgctttgccaatcaaatggaagccaggatcagagaaaaaacggcgtaaaaga
ggcccaactgcacctccaccattactgcttcagaacccggagaaggcccgcaaaaggatc
caagagcgagtagctatgctgcttgcagaagaggtggaattccctcccacccctcggctt
cccaatagtaggatattggaggatgaatctgggaaagcaacctggctcttgccgttgtcc
aaaaacagggagtgctttttgtggaatatcagtgctctgacaggatcctatgaccctgaa
tcattctacactactggattaacccctccaattgtaccttggaagcctgtgcagtcctct
ctgaggttgctggctgaagatttcagtgcaatggtcaacaatccccacttaagtgatgtc
cagttccaagtggactctggggaagtcctttatgcccacatgtttgtgttgtacgcacgg
tgtccacaggccattcaagttgttcacagccaggggttcctagtggaggaggatgggaat
gcgcagacacgccgtgtgctgctgagtncattcctgcgatacctttatgctgctgatgct
gacatccctgctggggtgctcccccaggtgggggctctggctgccaggtttggtatgaag
gaactgatggcaaagtgtgaaaacaacactggagagagtcaggtgtcttctggagtggat
tcagaagatgatcttatctctgtgagggatgacaaagattgtgaggacagagctgagaac
tttgaagacctcttgaagtcagtgtgggtgggtgaagatgaggaagaagtagctatgctg
aaccctgaatgccagaaggaagatgacaatggggtgggtgaacaggagctggaggaaatc
tatgagtttgctgcaactcagagaaagatggttcaaggtgaaacagaagtgagcgaggga
acagactgcagcatctgcagtgatactgaggcagcccaaggtacaaaccagcaaactgag
gaggaagaggtaaagagatctgaatctgctttaataagcaacagcttcaaagatttgagg
gatggcaatgatgtggagagatctaaatatgactcgtcagcacaagaagagaaaatgcag
aatataaataggtgcaagagcgtgaatgatccacagaccacttttgtgtctcaccacagt
gaacctcaaaaatgggacatagcatcccatggtgccactgttaatgaaggagagactgct
aggagatgtgaaggtgtgaaggattccaagccatctcaggtctcagatgacaaggcaggt
cactgtgaaaaacagtttcctagcttccatggtgatactaatataaatgaaagttatgaa
cgcttgttttctgcaactcagggagattactgtgagccttccccaatgaaagaagttatc
aaagaatcaggaaaggctcctagtgaaaaacatgttgatgttaatgattcacttccatac
agcaagtcacaaaaagacctctctccacataggaacggtttctatgggagtcctcctccc
aaaccttatgtgcccctttttcctgctgttggctcttcacctgcatctccaaaatcagag
agaaagtttgccggagaacacgtgtcaacaccaaagcaaaacaaaaaggaaaagtcattc
ccatctgataaaatacactttcagaaagccaacgagctggatactgcatcaggaaatgag
aacacaatttctccagaagagcttccccacattgatttaaacaagcatacatatgcacca
gtggtgtcatcactggtcatcagaactcagggtgctgcagctcaggggaagaaggagggt
gatgttattgttttatcttctgatgatgaaatagagttacaacaagacaagaagtcgcca
gagtcaggctctgctctgaataaaatggaaatctctgggcaactgaaatgcacaaacata
gaacaaggtcctgagataccaaaacctgaacataactcatcagtcactgaaacagagcag
agatcaacccaggtgtcatgtggcattacagatatagtgcatgtaagtaatgaagtaaag
atgtccactgaattgcctctcagcagacaaatagaagcttgtacggagagcaaacagggt
ccaaaactgaaccctgaaaaaaggctcagtcatgaaatgtcttcaggtacagacagctcc
tggctagtgccagacacaccggttctgagcaaaagcagaagtttctcaacacagactcag
gtcacaagtattaattctttaaagagtccaggatctaaactcagcacaaagaacttagca
gcaagtaatagtaaccatgaaatgactggaaattcaataaaagttcacgaaacaacattg
tcagacgaacatttgcctatggagaactcagtcagtgaaaggagcccttccagcagccca
gcaataggatcattttcccagaactccccaccagtttctccagtggatctagttcttctc
tcccctggccatatcaacatagaaagcaaatgtgccaagatctcatttttatccaatcct
gtgcctccatgccatgagcagtcattggaagacaaaacaagtatcagtgtggttgaggta
gaggacagtgaaaaggaaataagtctgccttctttgagtagtagcgtgttgctttgtggc
gagcccccaatccccgttgatgattgctggcatgttgaatatctgtcaccagtcagaggt
aacagccaggacttcaaccaggtcagccgtgcaaagatcagcactgccagcagccccaga
cctggctcttggcatgaccagtgggagagccctgtccacgcgcaggaaattaagggcagt
accccccttcgaggaagtcctgttggcagacgaacaactttgctttgtcctgaaaagagt
cctattgaggcatgttcatcagtgggcagtagactgagttacctgaactccaaaatctgg
gatgactggaatggagaagaagaggaagatgaatttccagagatgcttcctctgtctcag
aggttgtcagctgcagcaggttcctgtcagacagatgctgtaaagactcctgaaccttcc
tatcaggagaacgacaagcctcccagcactccaatgacaccaatgccagcttactccatc
atggagaccccgcaactgaagaaggagttgagcagatttggagttcgtgctctcccaaaa
cgccagatggtgttgaagctgaaggagatattccagtatactcaccaggatgtggactct
gactttgaggatgaaatcccatcttcgcagcctcccctgcagaagtccccagccaaacgc
tctaggcagtcaaaggcagaccggactgcaggtggaaagcgtgccaatgcctcgagggcg
gtgggcaaaaggaagcaggttgctacagcttcttcagtgctccctgtggggagggctgat
gatgaccttgttggatgccgtgaaacaggctgtgcagcacccaaggagggaactaaaatg
acacatgacccagaaggagccaaagagcagaaaaggtcgtctgtatctccagagagatgg
tctctggcagctgatggtgaggaaccaatgctctcagcatctcaggagtctgcagtttct
tcagtggatggaagcgacatctcttttggttcacagagttctttcatgaatggatttgaa
gcctgtgcttttgcatctgaggaggaggaagaggagcttccagcatctcaggcagcagct
caggaagaagataagctggaggcagtaaggtgctacatccgttcaaacacagccctgtac
cacaagattctcttttatgagccaattgagctggctgagctgcacacagagctgaaacag
aatggcattaaaatttccaaggcaaagctgctggactttttagatgctcactgtatcacg
tttaccacggccggagcccggaaggagaaggaacagaaaagaaaagggaacaaaaaacag
aggagacgatactaa
DBGET
integrated database retrieval system
