Pelecanus crispus (Dalmatian pelican): 104027202
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Entry
104027202 CDS
T08340
Symbol
TGFBRAP1
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
pcri
Pelecanus crispus (Dalmatian pelican)
Pathway
pcri04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pcri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104027202 (TGFBRAP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcri04131
]
104027202 (TGFBRAP1)
Membrane trafficking [BR:
pcri04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
104027202 (TGFBRAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
zf-Vps39_C
CNH
Clathrin
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
104027202
NCBI-ProteinID:
XP_009476145
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MSVKAFKLVSAVEREMLMGDKNYINIECIECCGKNLYIGTSDCFIYHFLLEEKISTAGKI
TFAATKQLHKYLGLKKPVSELKAASALTRLLVLCDNTITLVNMMNLEPVPTGARIKGAVT
FVLNENPVSGDPFCVEVCIISVKRRTIQMFMVFEDRVQIVKEVFTPEQPCAVAVDGYYLC
LALTTQYIILNYNTGVSQDLFPYCSDEKRPIVKRIGRQEFLLAGPGGLGMFATVDGISQR
APVHWSENVIGAALCFPYVVALDDEFITVHSMLDQQQKQTLPFKEGHILQDFEGKVIVAT
NKGVYILVPLPLEKQIQDLLASHRVEEALVLAKGARRNIPKEKFQVMYKRILQQAGFIQF
AQLQFLEAKELFRSGQLDVRELISLYPFLLPTSSSFIRSHPPLHEYADLNQLTQGDQEKM
TKCKRFLMSYLNEVRSTEVANGYKEDIDTALLKLYAEANHESLLDLLVSENFCLLTDSAA
WLEKHKKYFALGLLYHYNGQDAAALQLWVKIVDGDIQDSTRSDLYEYIVDFLTFCSDQDL
VWKYSEWVLQKNEEVGVQIFTKRPLEEQEKNNINPDDIISCLNKYPKARVKYLEHLVLER
KIEKEKYHTHLAVLYLEAILQLKSVTTDNCTETTELLFKLRSLLQKSDLYRIHFILDKIQ
GTDLHMESAILYGKLEEHEKALHILVHELKDFHAAEEYCIWNSKSRDMQYGRRLFHMLLS
VYLNPGTSDCALVMAAVDLLNNHAAEFDAALVLQLVPDSWSVQLLSPFLAGAVRQSIHTK
RMNQIALGLAKAENLIYKHEKVKQKGTPIRLSDKKVCQVCQNPFCEPVFVRYPNGGIVHT
HCAANRHLNSNMTHQSSNSSNQT
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttaaagctttcaagctcgtttctgctgttgagcgggagatgttaatgggagac
aaaaactacatcaacatcgaatgcattgagtgttgtggaaaaaacctctatattggaacc
agtgactgctttatctatcactttctgttggaagaaaagatctcaacagctggaaaaata
acttttgctgccaccaagcaactgcataaatacctgggcttgaagaagcctgtgagtgag
ttgaaagcagcctctgccctcaccaggcttcttgtgctttgcgacaacacaataacacta
gttaacatgatgaacttggaacctgtccccactggtgctagaatcaaaggagctgtgaca
ttcgtattaaatgaaaaccctgtgagtggggatcctttctgtgtcgaagtctgcattatc
tcggtcaagcggcggaccattcaaatgttcatggtgtttgaagacagagtccagatagtg
aaggaagtgtttactccagagcaaccctgtgctgtggctgtagatggttattacttatgt
ctcgcacttactacacagtatatcattttgaattataatactggtgtctcccaggatctg
tttccttattgcagtgatgagaaacggccaattgtgaaaaggataggcagacaagagttt
ctgttggctggccctggaggcctaggcatgtttgcaactgttgacggcatctcacagcgt
gcccctgtgcactggtcagagaacgtgattggagcagctttgtgctttccttacgtggtt
gctctcgatgatgagttcattacagtgcacagcatgctggaccagcagcaaaagcaaacg
ctgccttttaaagaaggtcacattctacaggactttgaaggaaaggtgattgttgctact
aataagggtgtgtatatcttggtgccgctgcctttggaaaaacagattcaggatcttcta
gctagccacagagtggaagaagcccttgttctagcaaaaggagctcgaaggaatattcca
aaagagaaatttcaggtaatgtacaaacgaatcctgcagcaagcaggttttatacagttt
gcacagcttcagttccttgaagcaaaagaactcttcagaagcggccagcttgacgtccgg
gagctgatctctctctaccccttcctgttgcctacttcctcttcatttatacggtctcat
ccccctctgcatgagtatgcggacctaaaccagctgacccaaggagaccaggagaagatg
acaaaatgcaaacgattcctcatgagttacttgaatgaagtccgcagcactgaggttgca
aacggctacaaggaagatattgacacagctttactcaagctgtatgcagaggcaaatcat
gaaagcctgttggatctgctagtttcggagaacttctgccttttaacagatagtgctgcc
tggctggaaaaacacaaaaagtattttgcccttggtctcctgtatcactacaatggccag
gatgctgcagcacttcagttatgggtcaaaatagttgatggagacattcaagattctaca
cgttcagatctctatgaatatatagtagacttccttacattctgctcagaccaagatcta
gtgtggaaatactctgaatgggttttacagaaaaatgaagaggttggcgtacagattttc
actaaaaggcccttggaagaacaggagaaaaacaacattaatccagatgatatcatcagt
tgccttaacaaatatcctaaagcacgtgttaaatatctggaacatctagtattggaaaga
aaaatagagaaagaaaagtaccatactcatctagctgtcttgtacttggaggcaatactt
cagctaaaatctgtgaccacagataattgtacagaaacaactgaactgctgtttaaacta
cgcagtcttcttcagaaatccgatctttatagaattcactttattttggacaaaatccag
ggcacagaccttcatatggaaagtgcaattttatatggaaaactagaagaacatgagaag
gctttgcatatccttgtccacgagttaaaggacttccatgctgctgaagaatactgtata
tggaactctaagagcagagacatgcagtacggacggaggcttttccatatgctgctgtca
gtgtatctaaatccaggcacttcggactgtgcactagtcatggctgctgtggatctcctg
aataaccacgctgctgaatttgatgcagctctagttttgcagctggtgcctgacagctgg
tcagtgcagctcctctccccgttcctggctggagcagtgaggcaaagtattcatacaaaa
agaatgaatcagattgcacttgggttagcaaaagctgaaaacttaatctacaaacatgag
aaggtcaaacaaaaaggaaccccaattcgtctttcagacaaaaaggtctgtcaggtgtgc
caaaatcctttctgcgagcctgtatttgtaagatacccaaatgggggtatcgtccacaca
cactgtgctgcaaacagacatctgaattcaaacatgactcatcagtcttccaactccagc
aatcagacttga
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