Pelecanus crispus (Dalmatian pelican): 104027315
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Entry
104027315 CDS
T08340
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
pcri
Pelecanus crispus (Dalmatian pelican)
Pathway
pcri03013
Nucleocytoplasmic transport
pcri03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104027315 (CASC3)
03015 mRNA surveillance pathway
104027315 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcri03019
]
104027315 (CASC3)
Messenger RNA biogenesis [BR:
pcri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104027315 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
104027315
NCBI-ProteinID:
XP_009476308
LinkDB
All DBs
Position
Unknown
AA seq
635 aa
AA seq
DB search
ESEDGIEGDAVLSDYESAEDSEAEEEDYSEEESAKAELKQDSNDSCESAAKAEKGDEKPD
SKGAVTGERQSGDGQESTEPVENKVGKKVPKHLDDDEDRKNPAYIPRKGLFFEHDLRGQT
QEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKTRQELIALYGYDIRSAHNPDDIKPRR
MRKPRFGSPPQRDPNWSNERPSKPPRHQGADSTSAPPRTFTNRSSAGTGRMPPPRNYPRM
GGYKETRPSYRASETSVQHLSRNGEQAKQEGNYRAKRAEQTPPRDKSPEMEAAHVHSSPA
KEEVALENQAMAADAAQPPPDRPIEKKSYSRARRTRIKAGDAGKLADEVPPSEGLTPVPP
KPVQAETSPPPAKSSNWESPVESSLDGLEQEMTQMNLTEQNWTPGQSQFIQPRELRGIPN
HMHVGTGPPPQFNRMEEMAVQGGRVKRYSSQRQRPPVPEPAPPMHISIMEGHYYDPLQFQ
GPIYTHSENPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPMANPGLYPPPVSMPPGQPPPQ
QLLAPTYFSPPGVMNFGNPGYPYPPGALPPPPPPHLYSNTQAQSQVYGGVTYYNTVQQQV
QPKPSPPRRTSQPVTIKPPPPEDSKGEKSKERSNT
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
gaaagcgaggatggcattgaaggagatgctgtactctcagattacgaaagcgcagaagac
tcagaggcagaggaagaggattacagcgaggaagaaagtgccaaagcggaactgaagcag
gatagtaatgattcctgtgagtcagcggcaaaagcagagaaaggggatgaaaaacctgac
tccaaaggtgctgtaactggtgagaggcaaagcggggatgggcaggagagcactgagcct
gttgagaataaagttgggaaaaaagttcccaagcacctggacgatgacgaggatcggaaa
aacccggcttacatcccacgcaaagggcttttctttgagcatgacctccgagggcagacg
caggaggaggaggtcaggccgaagggtcgtcagcggaagctgtggaaggatgagggccgc
tgggagcacgacaaattccgggaggacgagcaggcccccaagaccaggcaggagctgatt
gcgctttatggctatgacatcaggtcagctcacaaccctgacgacatcaagccgaggagg
atgcgcaaaccaaggtttgggagtcctcctcagcgagacccaaactggtccaacgagagg
ccaagtaagcccccaaggcaccaaggtgcagacagcacttcggctcccccgcgaacattc
accaacaggagctccgcaggtacagggaggatgcccccacctaggaactacccaaggatg
gggggctacaaagagacccgtccaagctaccgagcttcggaaacaagcgtccagcatctg
tctcgtaacggcgagcaagcaaaacaggagggcaactatcgagcaaagcgtgcggagcaa
accccaccacgagacaagtcacccgagatggaagcagcacacgtccacagcagccctgca
aaggaggaggttgctttggaaaaccaagccatggctgccgatgctgcacagccaccacca
gacagaccaattgaaaagaagtcttattcccgggcaagaaggaccagaatcaaagctggg
gatgcagggaagctggcagatgaagtgccgccttcggaagggctgactcctgtgcctcca
aaacctgtgcaagccgagacatcccccccaccagccaaaagcagtaactgggagtcgcca
gtagaatccagcttggatggactcgagcaagagatgacccaaatgaatctcactgagcag
aactggactccagggcagtctcagttcatacagccccgggagctgaggggtattcctaac
catatgcacgtgggaactgggccaccgcctcagtttaacaggatggaggaaatggcggtg
caggggggccgcgtgaaacgctactcgtcgcagcggcagagaccgccggtgccggagcct
gccccccccatgcacatcagcatcatggaagggcactactacgacccactacaattccag
ggaccaatctacacccacagtgagaacccagccccgctgccgccccaagggatgatcgta
cagccagaaatgcacctccctcatccaggtttacatccccaccagacaccagcccccatg
gcaaaccctgggctgtaccctccgccagtctccatgccgccgggccagcccccaccgcag
cagctgcttgcaccgacttacttctcccctcctggagtcatgaattttgggaatcctggc
tacccctaccccccaggagcactaccccctccgcctcctcctcatctctattccaacacg
caggcccagtcccaggtgtacggaggggtcacgtactacaacactgtccagcagcaagtg
cagcccaagccttctccacctcgaaggacatcccagcctgtgactatcaagccaccgcct
cctgaggacagcaaaggtgaaaagtcaaaggagaggagcaacacgtag
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