KEGG   Pelecanus crispus (Dalmatian pelican): 104027941
Entry
104027941         CDS       T08340                                 
Symbol
ERCC8
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
  KO
K10570  DNA excision repair protein ERCC-8
Organism
pcri  Pelecanus crispus (Dalmatian pelican)
Pathway
pcri03420  Nucleotide excision repair
pcri04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pcri00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    104027941 (ERCC8)
  09124 Replication and repair
   03420 Nucleotide excision repair
    104027941 (ERCC8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pcri04121]
    104027941 (ERCC8)
   03400 DNA repair and recombination proteins [BR:pcri03400]
    104027941 (ERCC8)
Ubiquitin system [BR:pcri04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     104027941 (ERCC8)
DNA repair and recombination proteins [BR:pcri03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      104027941 (ERCC8)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 EIF3I Beta-prop_RIG_2nd WDR55 WD_LRWD1 ANAPC4_WD40 Beta-prop_EML Beta-prop_EIPR1 Beta-prop_RIG_1st WDR90_beta-prop_4th Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_TEP1_C Beta-prop_Nup120_160 Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_HPS5 Beta-prop_Vps41
Other DBs
NCBI-GeneID: 104027941
NCBI-ProteinID: XP_009477111
LinkDB
Position
Unknown
AA seq 246 aa
MGYKYFTIGTKSPKVQLCDLKSGSCSHILQGHRQEVLAVSWSPRHEYVLATASADSRVKL
WDVRRASGCLTTLDQHNGEKSKASSEAANTAHNGRVNGLCYTNDGLHLLTIGTDDRMRLW
NSSTGENTLVNYGKVRNESRKGLKFTISCGCNPEFAFVPYDSTIAVYTIFTGELITMLRG
HYSTVNCCVFQPSFQELYSGSKDCNILAWIPALREPLPDDISEQSLPQQPLNPAYEDAWS
SSDDEG
NT seq 741 nt   +upstreamnt  +downstreamnt
atgggatacaaatactttacaattggtaccaaaagccccaaagtacagctctgtgacttg
aagtctggatcctgttctcacattctgcagggtcacaggcaagaagtactggcagtgtct
tggtccccacgtcatgaatatgttttggcaacagcaagtgctgacagtagagtaaaatta
tgggatgtgaggagagcatctggatgtctgactacacttgatcagcacaatggagaaaag
tccaaagcatcttctgaggcagcaaacactgctcacaatgggagagttaatggtttatgc
tatacaaatgatggacttcatcttttgaccattggcacagatgatcggatgcggctctgg
aacagctccactggagaaaacacgttagtgaattatgggaaagtccgtaatgaaagtaga
aaaggactcaaattcaccatctcttgtggctgtaatccagagtttgcctttgtaccatat
gatagtaccattgctgtttatacgattttcacaggagaactgataactatgcttagagga
cattatagtactgtcaactgctgtgtattccaacctagttttcaggaactttatagtggt
agcaaagattgcaacatccttgcatggataccagctcttcgagagccacttcctgatgac
atttctgaacagtctctgcctcaacagcctttaaatccagcatatgaagacgcttggagc
agcagtgatgatgaaggctga

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