Pelecanus crispus (Dalmatian pelican): 104028117
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Entry
104028117 CDS
T08340
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase PDZRN3-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
pcri
Pelecanus crispus (Dalmatian pelican)
Brite
KEGG Orthology (KO) [BR:
pcri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcri04121
]
104028117
Enzymes [BR:
pcri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104028117
Ubiquitin system [BR:
pcri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
104028117
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Tricorn_PDZ
Motif
Other DBs
NCBI-GeneID:
104028117
NCBI-ProteinID:
XP_009477329
LinkDB
All DBs
Position
Unknown
AA seq
778 aa
AA seq
DB search
MGCSLCTLQKQEEQYKLLYEVCQVNGKDLSKATHEQAVEAFKTAKEPIVVQVLRRTPRTK
VFTPPHDSQLVDVGTQTDITFEHIMALSKMGSPTPPVSVLDPYLLPEDCYILHPSVHEYY
DPNDYMGGIHQEMDRDELELEEVDLHRVNSQDKLGLTVCYRTDDEDDMGIYVSEIDPNSI
AAKDGRLREGDRIIQINGIEVQNREEAVALLTSEESKNISLLVARPEIQLDEGWMDDDRN
DFLDDLHMDMLEEQHHQAMQFTASMLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDDS
TRNDESSEQENNADDHTTSSNTLGSQKQLTYSHDTLGSGDMQFSNESFISADCTDVDFLG
IPVDECERFRELLELKCQVKSANPYSLYYHNSTLDMSKSDQESVDRELEMLNEELRNIEL
ECLNIVRAHKMQQLKDQYREPWMLHNSGFRNYNTSIDVRRHELSDITELPEKSDKDSSSA
YNTGESCRSTPLTLEISPDNSLRRTAEGINCQGNEGAVAYNVSQKNLFASSESHESSTGK
CHASAKDPDLGKQLESKEKKAGDGSKSPTHGQKPSGSYVSPYHHSPYKHAHIPAHAQHYQ
SYMQLIQQKSAVEYAQSQMSLVSMCKDFNSSQSEPRMEWKVKVRSDGTRYITKRPVRDRL
LRERAIKIKEERSGMTTDDDAISEMKIXERKQHLVKAKEQRRRREFMMQSRLDCLKEQQG
AEEKKEMNIIELSHKKMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgggatgcagtttgtgcactctacagaagcaagaagaacagtacaagttactgtatgaa
gtttgtcaggtcaatgggaaggatttatcgaaagcaacacacgagcaggcagtggaagca
ttcaaaacagccaaggagcccattgtggtgcaggtcctgagaagaaccccacgcaccaag
gtcttcactcctcctcacgactctcagctggtggatgtgggcacacagacagatatcact
tttgaacacatcatggctctcagcaagatgggctcacctactccccccgtctctgtgcta
gacccgtacctcctacccgaagactgctacattctccatccatcagtacacgaatactat
gacccaaatgactacatgggaggaattcatcaagaaatggaccgagatgagttggaatta
gaggaagtagatttacatagagtgaacagccaggacaagcttggccttactgtatgttac
agaacagatgatgaagatgacatgggtatttatgtgagtgagattgatcccaacagtatt
gctgcaaaagacggtcgactccgagaaggggatcgcattattcagatcaatggcatagag
gtacagaaccgagaagaagctgtggcacttctcaccagtgaagagagcaagaatatctcc
ttacttgttgcaagaccagaaattcagctggatgaaggatggatggatgatgacagaaat
gattttctggatgacttgcacatggacatgttagaggaacagcaccaccaggcaatgcaa
tttactgccagcatgcttcagcagaagaagcatgaggaggatggaggtaccacagataca
gccactattttatctaaccagcacgagaaggacagcggcgtggggcgcacagacgacagc
actcgcaacgatgagagctccgagcaggagaacaacgcagatgatcacaccacctcctcc
aacactttagggagccagaagcagctgacatacagtcatgacaccctaggaagcggcgat
atgcagttcagcaacgaatcatttatctcggccgactgcacagacgtcgacttccttggc
atccccgtagacgaatgcgagcgattccgggaactgctggaactgaagtgccaggtgaag
tctgccaacccttacagtctgtattatcataacagcacgctggatatgagcaagagcgac
caagaaagcgtggacagagagctggagatgctgaatgaggagctgcgcaatatcgagcta
gagtgcctgaatatcgtcagagctcataaaatgcagcagctgaaagatcagtaccgggag
ccctggatgctacacaacagcgggttccgcaactataacacaagcatcgacgttcgcagg
cacgagctctcagacattacggagctccccgagaagtctgacaaggatagctcaagtgca
tataacacaggcgaaagctgccgaagcacaccactcacgctggagatttcccctgacaat
tcgctgcgcagaactgcagaaggcattaactgtcaaggtaatgagggggcagtggcatat
aatgtctcccaaaagaatttatttgctagctcagaaagtcatgaatccagcactggtaaa
tgccatgcctctgctaaagatcccgaccttggcaagcagctggaaagcaaggagaaaaaa
gccggcgatggaagcaaaagccctactcatggtcaaaaaccttcgggctcctatgtctcc
ccgtaccaccactctccatacaagcatgctcatattcctgcccacgcacagcactatcag
agctacatgcagctgatccagcagaaatcagcggtggagtacgcacagagccaaatgagt
ctggtgagtatgtgcaaagactttaattcgagccagagcgaaccgaggatggagtggaaa
gtcaaggtcagaagcgatgggacccggtacattaccaagaggccggtgagggacaggctg
ctgagggaacgtgccataaagattaaggaggagcgcagcggtatgactaccgatgacgat
gccataagtgaaatgaagatannagagcggaagcagcatttagtgaaagcgaaggagcag
aggaggcggcgtgagtttatgatgcagagcaggttggattgcttaaaggaacagcaaggt
gcagaagaaaagaaagagatgaatatcattgaactgagccacaaaaaaatgatgaagaag
agaaataaaaaaatatttgacaattggatgacaatccaagaactgctaacccacggaaca
aagtcaccagacggcacacgggtgtacaattccttcctgtcagtgactactgtataa
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