Pelecanus crispus (Dalmatian pelican): 104028467
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Entry
104028467 CDS
T08340
Symbol
RHO
Name
(RefSeq) rhodopsin
KO
K04250
rhodopsin
Organism
pcri
Pelecanus crispus (Dalmatian pelican)
Pathway
pcri04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
pcri00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
104028467 (RHO)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
pcri04030
]
104028467 (RHO)
G protein-coupled receptors [BR:
pcri04030
]
Rhodopsin family
Vision
Opsin
104028467 (RHO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
Rhodopsin_N
7TM_GPCR_Srv
7TM_GPCR_Srw
7TM_GPCR_Srsx
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
104028467
NCBI-ProteinID:
XP_009477764
LinkDB
All DBs
Position
Unknown
AA seq
316 aa
AA seq
DB search
MNGTEGQDFYVPMSNKTGVVRSPFEYPQYYLAEPWKFSALAAYMFMLILLGFPVNFLTLY
VTIQHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMNGYFVFGVTGCYIEGFFATLG
GEIALWSLVVLAVERYVVVCKPMSNFRFGENHAIMGVAFSWIMALACAAPPLFGWSRYIP
EGMQCSCGIDYYTLKPEINNESFVIYMFVVHFMIPLMVIFFCYGNLVCTVKEAAAQQQES
ATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTNQGSDFGPIFMTIPAFFAKSSAI
YNPVIYIVMNKQVRGR
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaacgggacagaaggccaagacttctacgtgcccatgtccaacaagaccggggtggtg
cggagccccttcgagtacccccagtactacctggccgagccctggaagttctcggcgctg
gctgcctacatgttcatgctgatcctgcttggcttccccgtcaacttcctcacactgtac
gtcaccatccagcacaagaagctccggacgcctctaaactacatccttctgaacctggca
gtcgccgacctcttcatggtctttggaggcttcacgaccaccatgtacacttcgatgaac
gggtactttgtctttggagtaacagggtgctacatcgaaggcttctttgctacgctgggc
ggtgaaatcgctctctggtcgctggttgtcctggccgtcgaaagatacgtagtggtctgc
aagcccatgagcaacttccgcttcggggagaaccatgccatcatgggcgttgccttctcc
tggatcatggccttggcgtgcgcggctcccccgctgtttggctggtccaggtacatcccc
gagggcatgcagtgctcatgcgggatcgactattacactctgaaaccagagatcaacaac
gaatctttcgtcatctacatgtttgtggttcacttcatgatcccactgatggtcattttc
ttctgctacgggaacctggtttgcaccgtcaaggaggctgctgcccagcagcaggagtct
gccaccacccagaaggcagagaaagaagtgacccgcatggtcatcatcatggtcatcgcc
ttcctgatctgctgggtcccctacgccagcgtcgctttctacatcttcaccaaccagggg
tcggacttcggccccatcttcatgaccatcccggctttctttgccaagagctccgccatc
tacaaccctgtgatttacattgtaatgaacaaacaggtaaggggcagg
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