KEGG   Pelecanus crispus (Dalmatian pelican): 104028944
Entry
104028944         CDS       T08340                                 
Symbol
TRIM42
Name
(RefSeq) LOW QUALITY PROTEIN: tripartite motif-containing protein 42
  KO
K12018  tripartite motif-containing protein 42
Organism
pcri  Pelecanus crispus (Dalmatian pelican)
Brite
KEGG Orthology (KO) [BR:pcri00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pcri01009]
    104028944 (TRIM42)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pcri04121]
    104028944 (TRIM42)
Protein phosphatases and associated proteins [BR:pcri01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     104028944 (TRIM42)
Ubiquitin system [BR:pcri04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    104028944 (TRIM42)
SSDB
Motif
Pfam: fn3 zf-B_box Pur_ac_phosph_N Ig_DSCAM-DSCAML_C Ig_J_second
Other DBs
NCBI-GeneID: 104028944
NCBI-ProteinID: XP_009478393
LinkDB
Position
Unknown
AA seq 714 aa
MDENGHPCSICPCCSNCSYLTCHRRKEECCLCWHFLFTSEQNCSCFPCPYKEDKPCQCCH
CSCAEHANCWWCCCSCSNDPDCKCCCCGGENSACQYYESKCFRSSVNEPHHSRTSGTVQX
VESRSRTRNNASVITPERNVSSHAFRDQLACPLCKQLLLQPFMLPCNHCICEKCIIKTKS
KAEVTEDFYIIVCPVCSKAHCIPYTSKIQLRKNYLRAKLAKKYMRRHGFLRCRFDHSERP
VYCETCRERRRLATKRCRTCGINYCNECLHLNHSENGAQDHVFTKAHQEDHEQWRCLLHS
NSNLSEYCLDDHELICGFCKNSLHNDHETITLAVACSREAASLFNTIAKFRKVRQEVDND
LMEVILLKNNFKTYKDTKRKEIRNGFLKLRMVLHEQEKEMIELLENIELKKQKEISEYIN
YTSSQLSYMDGLIQYSKEALKEESQVVFLQSSHCLVKEIENAVPSIFQPSPRLREDPFRK
LQLNFDELFSFLQGLVPSLSGIKQSESKVEKYPYSFNPDIMVPRHVSSSHESKQETLFRS
PSLNSLFDLGVLPKDTVRRPRSTPPHHATQSNEVCTHRDTACETPRKERKYQTVNFSSPE
PIDNESVPVPGPVVIYQTFVYPWSAKIYWTCPTEDVDFFEVEFYEVAGIGPDNIVQTQLA
GQLSKIQQQNLEIHNLDPNTEYLFKVRAVNASGQGEWSEICKIITSEEYGKIED
NT seq 2144 nt   +upstreamnt  +downstreamnt
atggatgaaaatgggcatccctgttcaatctgcccatgctgctcaaactgctcttacctg
acctgccacaggagaaaggaagaatgctgcttgtgttggcacttcttgttcaccagtgag
cagaactgcagctgtttcccatgtccatacaaagaagacaaaccttgccagtgctgccac
tgctcatgtgcagagcacgcaaattgctggtggtgctgctgctcttgttcaaatgaccca
gactgcaaatgctgctgctgcggtggagagaattcagcatgccagtattatgaaagcaag
tgcttcagaagctctgtcaatgaaccacatcactcaaggacatcaggaactgttcagtaa
gtggagtcaagatctagaactaggaataatgcatctgtcattacaccagaaaggaatgtc
tccagccatgctttccgtgaccagcttgcctgtccactgtgtaagcaattgcttctccaa
ccatttatgctgccatgcaatcactgcatttgtgagaaatgtataattaaaaccaagagc
aaagctgaagtaactgaagacttttatatcatcgtatgcccggtgtgtagcaaagcacat
tgcatcccctacacaagtaaaattcagctgaggaagaattacctcagagcaaaactagcc
aagaaatacatgcgcagacatggctttctgagatgcagatttgaccatagcgaaagacca
gtctactgcgaaacttgcagggaaagaagaagattggcaaccaaaagatgtagaacatgt
ggaattaattattgtaatgaatgtctgcatttaaatcatagtgagaatggtgctcaagac
cacgttttcaccaaagcacatcaagaagatcatgaacagtggcgttgcttactgcacagc
aactcaaacctctctgaatactgtctggatgaccatgaactgatctgcgggttctgcaag
aactcactgcacaatgatcatgagactattaccttggcagtcgcatgttcaagagaggct
gcttccctctttaatacaattgcaaaatttagaaaagtgcgccaagaagttgataatgat
ctaatggaagttatcctgttaaaaaataatttcaagacctataaggacaccaaaaggaag
gagatcagaaatggattcttaaaattacgtatggttcttcatgaacaagaaaaggagatg
attgagttgcttgaaaacattgaacttaaaaaacagaaagaaatttcagaatacataaac
tatacatccagtcagctatcatatatggatggccttattcaatactctaaagaggctctt
aaggaggaaagccaagttgtgtttctgcaatcttcacactgcttagtgaaagaaatagaa
aatgcagttccttccattttccaacctagtccacgtctaagagaagatcccttcagaaaa
cttcaactcaactttgatgagcttttctcctttttacagggacttgtcccatcccttagc
ggaataaagcagtcagaaagtaaagtagaaaaatatccctattcttttaacccagacata
atggttccaaggcatgtttcaagttctcatgaatccaagcaagaaacattgttccgaagc
ccatctttaaattccttgtttgatttaggtgtgctgcctaaagacactgtcagaagacca
cgctctacaccgccccatcatgctacacagagtaatgaagtgtgtacgcaccgggataca
gcttgtgaaactccaagaaaagaaagaaaatatcagactgttaacttttcaagtccagaa
cctatagataatgaatcagtcccagtcccaggacctgttgttatataccagacttttgtt
tatccgtggtctgccaaaatttactggacttgtcccacagaagatgtggatttctttgag
gtagagttttatgaagttgctggtattggtcctgataacattgtccagacacaactagct
ggccagctaagcaaaatacagcagcagaaccttgagatacataatctggatccaaataca
gaatatctttttaaagtccgtgctgtcaatgcaagtggtcaaggagaatggagtgagatc
tgtaagataatcacttcagaagaatatgggaaaattgaagacag

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