Pelecanus crispus (Dalmatian pelican): 104029178
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Entry
104029178 CDS
T08340
Symbol
PATL1
Name
(RefSeq) LOW QUALITY PROTEIN: protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
pcri
Pelecanus crispus (Dalmatian pelican)
Pathway
pcri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104029178 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcri03019
]
104029178 (PATL1)
Messenger RNA biogenesis [BR:
pcri03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104029178 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
104029178 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
104029178
NCBI-ProteinID:
XP_009478683
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
EMPSVSVLDYALPQRPPQRREAARXFALPWLCASPVIGSPPVRAVPIGTPPKQAAVPNFN
QQILCPKPVHIRATMQQRYPAPYGERMSPNQLCNVPNSSLLGHPFPHSVSPVLTHLQRAQ
LLGGTQAGRMSPSQFARVSGLVGSPLPSVNPKLLQGRVGQMMSPASGFRAFFGAPPAPPP
SQPQDPPGRRLNGAGGDRGGHRSSHQEQMRKDPYANLMLQREKDWVSKIQMMQLQSTDPY
LDDYYYQNYFQKLEKLSAAEEVHGDGPKKERTKLITPQVAKLEHTYKPVQFEGSLGKLTV
SSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRQTLVTIEKTYSLLLDVEDYERRYLLSL
EDERLALMGERKQKICDMYDNLRGKAPGQERPSDDHFMQIMCIRKGKRLVARILPFLSPE
QAADVLMATARNLPFLIKKDAQDEVLPCLLRPFSHVLYHLPLGTVTSLVQQLTNLPQSAT
APAPTNLHLNAVLQNKFGLSLLYLVLSRGEELQSSDANTELMQDNQWTELMLMATRELLR
IPQAALAKPVSIPSNLTSIFF
NT seq
1684 nt
NT seq
+upstream
nt +downstream
nt
gagatgccgtcagtgtccgtgctggactacgctctgcctcagagacctccgcagcgtcga
gaggcagcgcgtnttttcgcgctgccctggctttgcgcgtcccctgtcatcgggagcccc
cctgtccgggctgtccccatcggcacccctcccaagcaggctgccgtgcccaacttcaac
caacagatcctgtgtccgaagcctgtccacatccgagctaccatgcagcagcgctacccc
gctccctacggcgagaggatgtcccccaaccagctctgcaatgtaccgaattcctccctt
ctgggccacccgttcccccacagcgtctctcccgtcctcacccacctgcagcgagcgcag
ctgcttggaggaacccaggctggccgaatgtcccccagccagtttgcccgggtctctggc
ctggttgggagccccctcccctccgtcaatcccaagctgctccagggcagagtcgggcag
atgatgtctccggccagcgggtttcgtgccttcttcggggctcccccggctccccctccc
tcgcagccgcaggacccgcccggccggcgcctcaacggcgcggggggggaccgagggggc
caccggagcagccatcaggagcagatgcgcaaagacccctacgccaacctcatgctgcag
cgggaaaaggactgggtgtccaagatccagatgatgcagcttcagagcactgatccctac
ctggatgactattactaccagaattacttccagaagctggagaagttgtcagcagcggag
gaagtccacggtgatggtcccaagaaggaacgcactaaactcatcacacctcaggtggct
aagctggagcacacctataagccagtgcagtttgagggctcgctcgggaagctcacggtt
tccagcgtgaacaacccccggaagatgatcgacgcggtggtaacctcccgcagcgaggat
gacgagacgaaggagaagcaggttcgggacaagaggcgccagacccttgtcacgatcgag
aagacgtacagcctcctcctggacgtggaggactacgagagacgctacctcctgagcctg
gaagacgagcggctggccctgatgggcgagaggaagcagaagatctgtgatatgtatgac
aatctgcgggggaaggcccccgggcaggagaggccaagcgacgaccacttcatgcagatc
atgtgcatccggaaagggaaacgcctcgtggcccggatcctccccttcttgtcacccgag
caagcggccgacgtactcatggcgacggccaggaacctgcccttcctcatcaagaaggat
gctcaggacgaggtgctgccctgcctgttgaggcccttctcgcacgttctctaccacctt
cccttggggacagtcaccagccttgtgcagcagctaacgaacctacctcagagcgcgacc
gcgccagcgcccaccaacctgcacctcaatgctgtgctccaaaacaagttcggcctgtcc
ctgctgtacttggtcttgagccgcggggaggaactgcagagctcggacgcgaacacggag
ctaatgcaggacaaccagtggacggagctgatgctcatggcaacccgggagctcctgcgg
atccctcaggcggccttggccaagccagtgtccatcccctcgaacctgacttccatcttc
tttc
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integrated database retrieval system
