Pelecanus crispus (Dalmatian pelican): 104029300
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Entry
104029300 CDS
T08340
Symbol
HFM1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
pcri
Pelecanus crispus (Dalmatian pelican)
Brite
KEGG Orthology (KO) [BR:
pcri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcri03036
]
104029300 (HFM1)
Enzymes [BR:
pcri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
104029300 (HFM1)
Chromosome and associated proteins [BR:
pcri03036
]
Eukaryotic type
Meiosis-specific proteins
Others
104029300 (HFM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_C
ResIII
DEXQc_Suv3
AAA_22
Motif
Other DBs
NCBI-GeneID:
104029300
NCBI-ProteinID:
XP_009478880
LinkDB
All DBs
Position
Unknown
AA seq
1390 aa
AA seq
DB search
MFNSADMVFSLDNLFYERPDTRQRYLENEEPKTWCIAPAPAIAEIPAAEELQRELEKSTA
NIHMGGRKDQKFIQQCKSNTEEVNDKSAAPVGFGVASDKEVLQLSVGEREKISFQRESLK
MVSLFLPSDQDKSKTGTGVSQQPGANFSHNKILSNFPENSDDESVHSTLRKSLFKTSGYM
YKNTDYKDNSMDVKEIDTYLNTSENMKEVRKEGFWRNNHHASITKDSDFTLRRVNDGDFA
SKNGIPMKSFSNASEILGMTGTTGRKLEILRAVTEIPTQFRSIFKDFPYFNYAQSKALDD
LLYTDRNFVVCAPTGSGKTVMFELAITRLLMEAPLPWLNTKVVYMAPIKALCSQRFDDWK
EKFGPIGLSCKELTGDTVMDDLFEIHHAHIIITTPEKWDSMTRRWRGNSLVQLVRLFLID
EVHVIKDESRGATLEVVVSRMKTVQSSLWRLSENHDAVPPLRFVAVSATIPNAEDIAEWL
SDSKMPAVCLKIDEDQRPVKLRKVVLGFPCSDNQTEFKFDLTLNYKIASIIQTYSEQKPA
LVFCATRKGVQQAASVLAKDAKFLLSIEQKQRLQRSANSLKDSKLRDLLIYGVAYHHAGM
EISDRKIIEGAFTVGDLPVLFTTSTLAMGVNLPAHLVVIKSTMHYVGGMFQEYSETDILQ
MIGRAGRPQFDTTATAVIMTRWSTREKYIQMLNGADIIESSLHRHLVEHLNAEIVLHTVT
DVTVALEWIRSSFLYIRALKNPTHYGFSSGLDKIGIEAKLQELCLKNLNDLSSFDLIRMD
EANNFKPTETGRLMAWYYIAFDTVKQFFTIKGTETLNELITMISKCTEFLDVKLRTNEKK
ILNALNKDKDKITIRFPMEGKIKTREMKINCLIQAQLGCIPIQDFTLTQDTGRIFRNGLR
VTRWLSDFLASYKNNFSALLNSLILAKCFRCKLWENSLHVSKQLEKIGVSLSNAMIHAGL
TSFKKIEDTNARELELILNRHPPFGNQIKESVLHLPKYELDIEQLPKYSDTSAEILVTIK
LTNYEQLQTKRTATDFHYVTLVIGDADNQVIFNQKIMDSVLLKTGNWTKKIEVKRALKSE
DISINLISSDYGARSKQEITYKKHGNRECNHRCKNKDVCGHDCCKTGVPPKSEMNEDSKF
SSYLADLRSRNSISSVPPVKRLKMQMLNQAPNVDLSQFVFTPKSSLPALPRSSNKQSSLS
PSVDQVDNVNSLGGSQRQLQSWSYGKSDALDVDFELRDDVWDDIDDEKLVFASSFASREL
DECEPLGQYTRSKATNDISKDSCTLSHETNIQNSVVSVVNSMSKVNLPVQSGNTNTFSFQ
EKKHSNPSQELKNIECSSISEIMSDSSKLARKEDFFIFTKGQEEVVDPRYLLDDEINDVK
PFLGIFDGIL
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactctgcagacatggtcttttcattggataatttattttacgaaagaccagat
acaagacaaaggtatctagaaaatgaagagcctaagacttggtgtattgcacctgctcca
gctattgctgaaattccagccgcagaggagttacagagggaactggaaaaatccacagcc
aacattcatatgggagggagaaaggaccagaagtttatacaacaatgtaagagtaacact
gaggaagtaaatgataaatcagcagcacctgttggttttggtgtagcctctgacaaagaa
gtgctccaattaagtgtaggagaaagagaaaaaattagttttcagcgggaaagtctgaaa
atggtttcattgtttctcccttctgaccaagataaatctaaaacaggaacaggggtttct
cagcaacctggtgcaaatttttcacacaataaaatactgagtaattttccagaaaacagt
gatgatgagagtgtccattcaacattaagaaaaagcttatttaagacatctggttatatg
tataaaaatacagactataaagataattctatggatgtgaaagaaattgatacttactta
aatacaagtgagaacatgaaagaagtgagaaaagaaggtttctggagaaataatcatcac
gcttcaataactaaggactcagattttactctgcgtagggtaaatgatggggactttgcg
tctaaaaatggaattccaatgaaatcattttctaatgcttcagagattctgggtatgaca
ggaactacaggaagaaaactggaaattttgagggctgttacagaaataccaacccaattc
agaagtatttttaaggacttcccatattttaactatgcacagtcaaaagctttggatgat
cttctttatacagataggaattttgtggtttgtgctccaactggctctggaaaaacagta
atgttcgagctagctattaccagactactcatggaagccccactgccttggttaaatact
aaagttgtttacatggctccaataaaagctctatgcagtcagcgttttgatgattggaaa
gaaaaatttggacctataggactcagctgcaaggaactgacaggagatacagtgatggat
gatttatttgaaatacatcatgctcacattattatcactacacctgaaaaatgggatagc
atgactagaaggtggagaggcaactctctagtccagcttgtacgactgtttctcattgat
gaggtgcatgttataaaggatgaaagccgtggcgcaacattagaagttgtagtcagtcgg
atgaagactgttcagtcttctctttggcgtctttcagagaatcatgatgctgttcctccc
ttgagatttgtagctgtttctgcaacaatcccaaatgctgaagatattgcagaatggctt
tcagatagtaagatgcccgctgtatgtctgaaaatagatgaggatcaacgaccagtgaag
ctacgcaaagttgttcttggttttccttgcagtgacaatcagacagaattcaaatttgac
ttaactcttaactacaagatagctagtattatacaaacatactcggaacaaaaaccagca
cttgtgttttgtgccacaagaaaaggagtacagcaggctgcttctgttcttgcaaaagat
gctaaatttctactgagtatagaacagaaacaaagattacagaggtctgcaaattcattg
aaagattccaaactgagagatcttctaatatatggtgtggcttatcatcatgcgggtatg
gagatatctgacagaaaaataattgaaggagcttttactgtaggagacttaccagtactt
tttactactagcaccttagctatgggagtcaatctgcctgcacacctggtggttataaaa
tccacaatgcactatgttggaggaatgttccaagagtacagtgaaactgatattctgcaa
atgattgggagagcaggaagacctcaatttgacactacagctacagcagttattatgact
cgttggagtacaagggagaagtatatacagatgttaaatggtgctgatataatagagagc
agcttgcacaggcatcttgttgagcacttaaatgcagaaatagtgctacatactgtgaca
gatgtcactgtagctttggaatggatacgatcatcattcttgtacattagagccttaaaa
aatccaactcattatggtttttcatctggattggataaaattggaattgaagcaaaatta
caagaactgtgtttgaagaacttaaatgatttatcatcttttgatttgatcagaatggat
gaagcaaataatttcaaaccaacagagactggaagattaatggcgtggtattacattgca
tttgatacagtgaaacaatttttcacaattaagggaacagagactttaaatgagttgatt
acaatgatctccaagtgcacagaatttctggatgtcaagttaagaacaaatgaaaagaaa
atactgaacgctttgaataaagacaaggacaaaataactatcaggttcccaatggagggg
aagataaaaacaagagaaatgaaaataaactgtcttattcaggctcagctaggatgcatt
cctattcaagactttactttgacacaagatactgggagaatatttagaaatggcttaaga
gttactagatggttatctgactttctggcatcatataagaacaacttttctgctttatta
aactctttgattttagcaaagtgtttcaggtgcaaactttgggaaaattcacttcatgtg
tctaaacaattggaaaaaatcggtgtatcgctgtcaaatgctatgatacatgctgggctg
acatcatttaaaaaaatagaagacacaaatgcaagggaacttgaattgattttaaacaga
catcctccttttggaaatcagataaaagaatctgttttgcatcttccaaaatatgaactt
gacattgaacagcttccaaaatacagtgatacatcagctgaaatcttagtaaccatcaaa
ttaacaaactatgagcagctgcagacaaagagaacagcgacagactttcactatgttaca
ttggtcataggagatgctgacaaccaagtcatttttaatcagaaaattatggattctgtg
ctgctgaaaactggaaattggacgaagaaaattgaagtgaaaagagctcttaaatcagag
gacattagtataaatttaattagttctgattatggagccagatctaaacaagagattacc
tacaagaaacatggaaacagagaatgcaaccatcgctgtaaaaataaagatgtgtgtgga
catgactgctgtaaaactggagtacctccaaagtctgagatgaatgaagattcaaagttt
tcttcgtacctagccgatttaaggagcaggaactcaatttcatctgtacccccagtaaaa
cggttaaagatgcagatgttaaatcaagctccaaacgtggatctcagtcaatttgttttt
acacctaaatcttcgttgccggcattgccaaggtctagtaataaacagtcatctttatca
ccttcagtggaccaggtagataatgttaatagcttaggaggatctcagagacaactgcaa
tcctggagttacgggaagagtgatgctttggatgtggactttgaactgagagatgatgtt
tgggatgatattgatgatgagaaattagtatttgctagcagctttgccagtagagaatta
gatgagtgtgaaccacttggccagtatacaagaagcaaagccacaaatgacatttcaaaa
gattcatgcacattatcacatgagaccaatattcagaactcagttgtttctgtggttaac
agcatgtcaaaagtgaatttacctgtacagagtggaaatacaaatacgttcagttttcaa
gaaaaaaaacattcaaatccttcacaagagctgaaaaacatagagtgttcttcaatctca
gaaataatgtcagactcttctaaattagctaggaaagaggatttttttattttcacaaaa
ggacaggaagaagtagtggatcccagataccttcttgatgatgaaatcaatgatgtcaag
cccttccttggaatatttgatggcattttgtaa
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integrated database retrieval system
