Pelecanus crispus (Dalmatian pelican): 104029416
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Entry
104029416 CDS
T08340
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
pcri
Pelecanus crispus (Dalmatian pelican)
Pathway
pcri04140
Autophagy - animal
pcri04148
Efferocytosis
pcri05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pcri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104029416 (VPS18)
04148 Efferocytosis
104029416 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104029416 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcri04131
]
104029416 (VPS18)
Membrane trafficking [BR:
pcri04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
104029416 (VPS18)
Hops complex
104029416 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-C3HC4_2
zf-RING_16
zf-RING_Vps41
zf-RING_5
zf-RING_11
Lact-deh-memb
zf-ANAPC11
zf-RING_UBOX
zf_RING_Vps8
zf-RING_2
Nup54_57_C
DUF2229
DUF5600
zf-rbx1
DUF1664
KNOX2
Motif
Other DBs
NCBI-GeneID:
104029416
NCBI-ProteinID:
XP_009479025
LinkDB
All DBs
Position
Unknown
AA seq
943 aa
AA seq
DB search
YVNARLEKETPIFNKQRIDFAPPEKINSLVVSSNQLCMSLGKDTLLRIDLGKPDEPNQVE
LGRKDEAKVYKMFLDHTGSHLLIALNTSDCLYLNRSVQKVRALSRWKGHLIESVGWNKFL
GSETNTGPILVGTAQGQIYEAEISVSEGSLFSTNPDQYFRQVYTLEEESGPAPVCCLEIE
RGIEGKFFIIATTRKRLFQFVGKVPEGTEQQGFSSIFAMHADHLPSFREFPASFGFSEIA
FYTPKLRSNPRSFAWMMGNGVLYGTLDYSRPDSILSDERVWVYPSDIDITVNKPISIVLT
QFHFLLLLPDRVKAVCTLNGQVVFQDLFLEKFGLLTRMIKDPTVQQIWIHTEKVVFRYHV
QRESRDVWKMYMNMNKFDLAKEYCKDRPECLDIVLAKEAEHCFQNKRYLDSAKCYALTQN
YFEEIALKFIEAKQEEALMEFLIKKLSNLKPSEKTQTTLLTTWLTELYLNWLGILEGDPS
QRNLYLDTREKFRTFLSSPKNKDCLFNNRASIYELLASHGDTEHMVYFAVIMQDYERVVA
HHCQHDEYDEALNVLSRHRDEKLFYKFSPVLIQHIPKKVVDAWISMGSRLDARNLIPALV
NYSQSASTQQINEAIRYMEFCVYQLEETQQAIHNYLLSLYALCRPDSLLSYLEQAGTNPN
RIHYDLKYALRLCAEHGHHHACVHIYKVMELYEEAVDLALQVDVDLAKSCADLPEDDEEL
RKKLWLKIARHVVQEEKDVKKAMACLSSCALLKIEDVLPFFPDFVTIDHFKEAICNSLED
YNKHIEELKREMEEATQSAKRIREDIQEMRNKYGSVEPQEKCAACDFPLLNRPFYLFLCG
HMFHYDCLLQAVFPNLPAYKQAKLEDLQKKLAATSQPSKSHHRPKDADTISLGKGQQSRE
QIKADIDDIVAAECVYCGELMIRSIDKPFIDPQKYEEEMQSWL
NT seq
2834 nt
NT seq
+upstream
nt +downstream
nt
gatatgtgaatgcacgattggagaaggaaacaccaatatttaacaagcaaaggattgatt
ttgctcctccagagaaaattaacagcttagtggtctcctctaaccagctctgtatgagcc
ttggcaaagacacccttctcaggattgatcttgggaagccagatgaacctaatcaggtag
agctgggacgcaaagatgaagccaaagtctacaagatgtttttggaccacacaggctctc
atctcctgattgctctgaacaccagtgattgcctttacctgaacagaagtgttcagaaag
tgcgagcgctctcccgctggaaaggccacttgattgaaagtgtgggctggaacaaatttc
ttggttcagagaccaacactgggcctatcctggtggggacagcccaggggcagatctatg
aggctgaaatctctgtcagcgagggaagcctcttcagcactaatcctgaccagtacttcc
gacaggtctacacgctggaggaggaatcaggacctgccccagtctgctgcttggagattg
aaagagggatagaagggaaattttttattatagccaccactcgaaagagactcttccagt
ttgttggcaaagtgcctgaaggaacagagcagcaaggcttcagctctatatttgctatgc
atgctgaccatctgcccagcttccgggagtttccagccagctttggtttcagtgagatag
ccttttacaccccaaaactgcgctccaacccacgctcctttgcctggatgatgggaaatg
gtgttttatatggtacattggattatagccgtcctgattcaattttgagtgatgaacggg
tctgggtttatccttctgatattgacataactgtgaacaagccaatatccattgtactta
cccagttccacttcctgttgctgctgcctgatcgggtgaaggctgtatgcaccctgaatg
ggcaggtggtttttcaagatctgttcctggagaagtttggcttgctgacacgtatgatca
aagatcccacagtccagcagatatggatccacactgagaaagtagtgttccgctaccacg
tccagcgggaatctagagatgtgtggaagatgtatatgaatatgaacaaattcgatttag
ccaaagagtattgtaaagaccgtccagagtgcctagatattgtgctggcaaaagaggcag
agcactgcttccaaaacaagaggtatctagacagtgccaaatgttacgcactgacccaga
actactttgaggaaattgcccttaagttcattgaagccaagcaagaagaggccctgatgg
aatttctgattaagaagctaagtaacctaaagccttctgagaagacacagacaactctgc
tgaccacatggttaacagagctgtacctgaactggctaggtatattggaaggagatccct
cacagcgaaatctttatttggatacacgggagaagtttcgcactttcctgagcagtccta
aaaacaaagactgtctgtttaataaccgggcatctatttatgagctgttggcaagccatg
gggacacagagcacatggtctactttgcagtcatcatgcaggactatgagcgcgtagtag
ctcaccactgccagcatgatgagtacgatgaagctctaaatgtgctgtccaggcacagag
atgagaagctgttctacaagttctctccagtcctcatccagcatattcccaagaaggtag
ttgatgcttggatttctatgggctctaggctggatgccaggaatctcattccagccctcg
ttaactatagccagagtgccagcacccagcagatcaatgaagccattagatatatggagt
tctgcgtctatcagttggaggaaacccagcaagccattcacaactacctgttgtctcttt
atgctttgtgtcggccggactcgctgctatcgtacctggagcaagcaggaaccaacccaa
ataggattcactatgacctgaagtatgcattgcgcctgtgtgcagagcatgggcaccacc
atgcatgtgtccatatttacaaagtgatggaattgtatgaggaggctgtggatctcgcct
tacaggtggatgttgatcttgccaagtcctgtgcagatctccctgaagatgatgaggaac
tccggaagaagctctggttgaagattgctcgccatgttgttcaggaagagaaggatgtca
agaaggcaatggcctgcctctccagctgtgccctgctgaagattgaagacgtcctgccat
tctttccagactttgtcactattgatcatttcaaggaggcaatctgtaactccctggagg
actacaacaagcacattgaggagctgaaaagggagatggaggaagccacccagagtgcca
agagaatccgagaggatatccaggaaatgagaaataagtatggctctgtggaacctcagg
aaaaatgtgctgcttgtgactttccacttctaaaccgccctttctaccttttcttgtgtg
gtcacatgtttcactatgactgtctcctccaagcggttttcccaaaccttcctgcctata
agcaggcaaaacttgaagatcttcagaagaagctggcagctaccagtcagccttccaaga
gccaccatcgtcccaaggacgcagataccattagcttggggaaggggcagcagagccggg
aacagatcaaagctgacattgatgacattgtggcagccgaatgtgtgtactgtggtgagc
tgatgatccggtccattgacaagccttttattgatccccaaaagtatgaagaggagatgc
aaagctggctgtag
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integrated database retrieval system
