KEGG   Pelecanus crispus (Dalmatian pelican): 104030234
Entry
104030234         CDS       T08340                                 
Symbol
APTX
Name
(RefSeq) aprataxin isoform X1
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
pcri  Pelecanus crispus (Dalmatian pelican)
Pathway
pcri03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pcri00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    104030234 (APTX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pcri03400]
    104030234 (APTX)
Enzymes [BR:pcri01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     104030234 (APTX)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     104030234 (APTX)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     104030234 (APTX)
DNA repair and recombination proteins [BR:pcri03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     104030234 (APTX)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     104030234 (APTX)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT FHA FtsK_SpoIIIE_N
Other DBs
NCBI-GeneID: 104030234
NCBI-ProteinID: XP_009480140
LinkDB
Position
Unknown
AA seq 350 aa
MRVCWLLGKEKCSQRMKLPHLEAVVIGRGPETGITDKKCSRQQVQLKADCNKGYVTVKQI
GVNPTSVDLVNIGKGEEVKMKPGQVLHIVNKLYPYTVQFTEESDKTVTEAEEKIQTDKMP
CEDSCENDDVELVPRKTMKMEVVDTQGNSANPKLSNTAVSACEGTSSKKEHLGHWSQGLK
SSMQDPKMQVYKDEKTVVIKDKYPKARYHWLILPWDPISSLKSVSRDHLELLEHMHAVGQ
KMIEQCPARESLEFRLGYHAIPSMSQLHLHVISQDFDSPALKTKKHWNSFTTDYFLNSQD
VIEMVRSKGKVMVKDHVSELLKLPLRCHCCKQQLSTIPQLKEHLRKHWPK
NT seq 1053 nt   +upstreamnt  +downstreamnt
atgcgtgtgtgctggctcttggggaaagagaaatgcagtcagcgaatgaaactgccacac
ttggaagcagtggtaattgggcgtggcccagagactgggataacggataaaaagtgttca
cggcagcaagttcagttaaaagcagactgtaacaaggggtatgtcacagttaagcagata
ggagtcaacccaactagtgttgatctcgtgaatattggcaagggtgaagaggtgaaaatg
aagccaggccaggttctgcatattgtgaataaactttacccctacacggtgcaatttact
gaagagtcagataaaactgttacagaagcagaagagaaaatacaaactgacaagatgcca
tgtgaggactcctgtgagaatgatgatgtagagcttgtgcccagaaaaacaatgaagatg
gaggtggtagatacacaaggcaattctgcaaatcctaagctgagcaatactgctgtatct
gcatgtgaaggaacttcgagcaaaaaggaacatttaggacactggagtcagggtctaaag
agctccatgcaagatccaaaaatgcaggtttacaaagatgaaaagactgtagtcatcaag
gataaatatcccaaagcacgttaccactggcttatcttaccatgggaccccatttcaagc
ctgaagtcagtcagcagggaccatcttgaactcctggaacatatgcatgcagttgggcaa
aaaatgattgaacagtgccctgccagagagagtctggagttcagactgggttaccatgct
atccccagtatgagtcagctacatttgcatgtaatcagccaggattttgattctccggcc
ctgaaaaccaaaaagcactggaactcttttacgacagactacttcttaaactctcaagat
gtgatagagatggtaagaagcaagggaaaagtgatggtgaaagatcacgtctctgaactt
ctcaaattgcccctcagatgccattgttgcaaacaacagctgtccactatcccacagtta
aaggaacatctcaggaaacactggccaaaatga

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