Pelecanus crispus (Dalmatian pelican): 104030521
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Entry
104030521 CDS
T08340
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
pcri
Pelecanus crispus (Dalmatian pelican)
Pathway
pcri03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pcri00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104030521 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcri03000
]
104030521 (ARID1A)
03021 Transcription machinery [BR:
pcri03021
]
104030521 (ARID1A)
03036 Chromosome and associated proteins [BR:
pcri03036
]
104030521 (ARID1A)
Transcription factors [BR:
pcri03000
]
Eukaryotic type
Helix-turn-helix
ARID
104030521 (ARID1A)
Transcription machinery [BR:
pcri03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104030521 (ARID1A)
Chromosome and associated proteins [BR:
pcri03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104030521 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
104030521
NCBI-ProteinID:
XP_009480524
LinkDB
All DBs
Position
Unknown
AA seq
1893 aa
AA seq
DB search
MDQMGKMRPQPYGGNNPYTQQQGPQAGPQQGHGYPGQPYGPQTPQRYPMGMQSRTQSTMG
SISYAQQIPPYGQQGPSAYGQQSQTPYYNQQSPHPQQQQPPYSQQPTSQTPHSQPSYQQQ
QQPQSQPPQLQTSQPAYSQQQSQPPHQQSPTPYPQQQSTAQPHQQSQPPYSQQQSQSPYQ
QQQQTQQTASSALSQQSSSYPQSQQQQQQSAYSQQRFPPPQELSQDSFGSQASSAPSMAS
SKGQEDMNLNLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPF
SPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIMHPSM
NQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQSSGGQMHAGMGPYQQNSMGSYGPQGG
QYGPQGGYPRQPNYNAMSNANYPSPGMGGSMNPMGAGSQMHGQTGVPPYSGLPPGRMSHA
TMGNRPYGPNMANMPPQVGTGMCPPPGGMNRKAQEAAAAAMHAAANSIQNRPPGYPNMNQ
GGMMGTGPPYGQGINSMGGMINPQGPPYPMGGNMANNSAGMAASPEMMGLGDVKLTPATK
MNNKADGTPKAESKSKKSSSSTTTNEKITKLYELGGEPERKIWVDRYLAFTEEKAMGMTN
LPAVGRKPLDLYRLYISVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCL
YAFECKIERGEDPPPDIFAAADSKKSQTKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDL
KPPTPASTPHSQMPPLPGIRSNSVGLQDAFADGSDPTFQKRNSMTPNPGYQPSMNTSDMM
GRMSYEPNKDPYSSMRKAPANDPFMPSGQGPNSGMGDPYNRAAGPGMGNMAMGQRQHYSY
GGPYDRVRTEPGMGPEGNLATGTPQPNIMPSTPESGMYSPSRYPQQQQQQQQRHDSYGNQ
FSTQGTSSGSPFPSQQTTMYQQQQQNYKRPMDGSYGPPAKRHEGEMYNVPYSAGQGQTQQ
QLPPAQTQQPSQQQTAQPSPQQDLYNQYGSTYPAADRRSAGGPQNQFPFQFGRDRVSAPP
GSNAQQNMPPQMMGGPIQSTPEGPQQGAMWQGRNEIGYSYPNRQSAGSAPQGPAYHGVTR
TDEILHSDQRVNHEGPWPSHGNRQPPYGPSAPVPPMTRPPQSNYQTPPSMQNHIPQVSSP
APLPRPLENRTSPSKSPFLHSGMKMQKAGPPVPASHITPAAVQPPMIRRDITFPPGSVEA
TQPVLKQRRRLTAKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSIMTFNLSQ
LPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPERFCKSSASSHEEGEEDDEPR
SLNCEEEEDEEEEEAAFSSKDKAPLESSEEKLVSKFDKLPVKVVQKNDPFVVDYSDKLGR
VQEFESGLLHWRIGGGDTTEHIQTHFESKTELPLTHKRASCNSVLRKRSAAESNPSTREG
ETPPSDSSSEKRITATMDDMLSARPGSLAGEEEEVKALETAKESSKFPFGISPAQSHRNI
KILEDEPHSKDETPLCTLLDWQDSLAKRCICVSNIIRSLSFVPGNDFEMSKHPGLLLILG
KLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKVEWWWDCLEMLRENTLVTLANISGQLD
LSPYPESICLPILDGLLHWAVCPSAEAQDPFPTLGPNAVLSPQRLVLETLSKLSIQDNNV
DLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVVLLANLAQGDSLAARAIAVQKGSI
GNLLGFLEDSLAATQFQQSQAGLMHMQNPPFESTSVDMMRRAARALLALAKVDENHSEFT
LYESRLLDISVSPLMNPLVSQVICDVLFLIGQS
NT seq
5682 nt
NT seq
+upstream
nt +downstream
nt
atggatcagatggggaagatgaggcctcagccgtatggaggaaacaacccgtacacacaa
caacagggacctcaagcggggccgcagcaaggacatggctatccaggacagccgtatggg
ccacaaactccccagagatatcccatgggaatgcaaagcaggacgcaaagtacaatgggc
agcatctcgtatgcacagcagattcctccttacggacagcagggccccagtgcgtatggg
cagcaaagccagactccgtactacaaccagcaaagccctcatccccaacagcagcagcct
ccatattctcagcagcctacatcccagacccctcactctcagccttcttatcagcagcag
caacagcctcagtctcaacctccacagcttcagacatcgcagccggcgtattctcagcag
cagtcccagccgccccatcagcagtccccaactccatatcctcagcagcagtccacagcc
cagccacatcaacagagtcagcctccctactcacagcagcagtcccagtcgccctaccag
cagcagcaacaaactcagcagacggcttcctcggctctttcgcagcagtcatcttcatac
cctcagtcgcagcagcagcagcagcagtctgcgtactcccagcaacgcttcccccctcct
caggagttatctcaagactcgtttgggtcccaggcatcgtctgctccctcaatggcttcc
agtaaagggcaagaagatatgaacttgaatcttcagtccagaccttctagcctgccggac
ctgtctggttcaatagatgatctacccatgggtacagaaggagccctgagtcctggagta
agcacatcagggatttccagcagtcaaggagagcagagtaacccagctcagtctcctttc
tctccacatacctctcctcacctgccaggcatcagaggaccctccccatccccagttgga
tctccagctagcgttgctcagtcccgctctggtccactttcacctgctgcagtaccaggc
aatcagatgccaccccgaccgcccagtggccagtcggacagtatcatgcatccttccatg
aaccagtcaagcatagcgcaagatcgaggttacatgcagaggaatcctcagatgccccag
tacagctcaccccagcccggctcagccttatctccccgtcagtcttctggaggacagatg
cacgctggcatggggccgtaccagcagaactccatgggaagctacggaccccagggcggg
cagtacggacctcaaggaggttatcccaggcagccaaactacaatgctatgtccaatgcc
aactaccccagtccgggaatgggaggaagcatgaaccccatgggagcagggagccagatg
catgggcagaccggtgtgccaccatacagcgggcttcctccggggaggatgagccatgca
accatggggaacagaccttacggacctaacatggcgaatatgccgcctcaggtggggaca
gggatgtgccccccgccgggaggcatgaatcgcaaagcacaagaagcggctgctgccgcc
atgcatgctgctgccaactccatccagaacaggcctcctggttatcccaacatgaatcaa
gggggaatgatgggcactggacctccttacggacagggaattaacagtatgggtggcatg
ataaacccccagggcccaccctatcccatgggtgggaatatggcaaacaactctgcaggg
atggcagcaagccctgaaatgatgggtcttggggatgtcaaattaacacctgcaactaaa
atgaacaataaggcagatgggacgccaaaagcggaatccaagtcaaagaagtccagttcc
tctactacaaccaatgagaagatcaccaaactctatgagctgggtggtgagcctgagagg
aagatctgggtagatcgttacctggcctttactgaagagaaggccatgggcatgacaaat
ctcccagcggtaggcaggaaacccttggacctttaccggctctacatctcggtgaaggag
attggaggattgactcaggtcaacaaaaacaagaagtggcgtgagttagccacaaatctc
aatgtgggcacgtccagcagtgcggctagttctttgaagaagcagtacatccagtgtctc
tatgcctttgagtgcaagattgagcgaggtgaagacccccctccagatatctttgcagct
gccgattcaaagaagtctcagactaagatacagcctccatctccagcgggttcaggctca
atgcagggtcctcagacgcctcagtccaccagcagctccatggcagaaggaggagacctg
aagccaccaactccagcatctacgccacacagccagatgccccctttgccaggcatcagg
agtaactcagtgggccttcaggatgcctttgcagatggtagtgatcctacgttccagaag
cggaactccatgactccaaatccagggtaccagcccagcatgaatacctccgacatgatg
ggtcgcatgtcttacgagccaaataaagatccttacagcagtatgaggaaagctccagca
aacgatcccttcatgccctcagggcagggccccaacagtggtatgggtgacccttacaat
cgtgctgcaggtccagggatgggtaacatggccatgggacagcggcaacactattcctac
ggaggcccttacgacagagtgaggacggagcccggcatgggacctgagggcaacttagca
accggaactccgcagccaaacatcatgccttccacccctgaatcggggatgtactctccc
agccgctacccacagcagcagcagcagcagcagcaaagacatgattcctatggcaatcaa
ttctccactcaaggcacatcctcgggcagccccttccctagccagcaaactaccatgtat
caacagcaacagcagaattacaagcgaccgatggatggcagctacggcccgcccgctaag
cgacacgaaggggagatgtacaatgtaccatacagcgccgggcaggggcagacgcagcag
cagctgcctccagcacagacccagcaaccgagccagcagcaaactgcacagccgtctcca
cagcaggacttgtataaccagtatgggagtacataccctgctgctgaccgccgatctgcc
ggagggccacagaaccagttcccattccaatttggcagagacagggtctcagctccccca
ggctccaatgctcagcaaaacatgcctcctcagatgatgggtggtccgatacagtctact
ccagagggcccacagcaaggcgccatgtggcaagggcgcaacgaaatagggtacagctat
ccgaatcggcagagcgctggctctgcgccccaggggcctgcttatcacggagtgactcga
acagatgaaattctgcattcagaccagagggtcaaccatgagggaccgtggccttcccat
gggaaccggcaacctccttatggtccctctgcccccgtgcccccaatgactaggcccccc
cagtctaactaccagaccccccctagcatgcagaatcacattcctcaggtatccagccca
gcacctctgcccagacctctggagaatcgcacttctcctagtaaatctccattcctgcac
tcggggatgaaaatgcagaaggcaggaccgccagtccctgcctcgcatataacaccagca
gctgtacagcctcccatgatccgacgagacatcaccttccctccgggatcagtagaagct
acgcagcctgtgttgaagcagaggagacggctgacagcaaaagatatcggaactcctgaa
gcctggagagtgatgatgtctctgaagtctgggctgctagctgaaagtacgtgggcctta
gataccataaacatcctgctctatgatgacaacagcataatgaccttcaatctcagccag
ctgccaggcttgctggaactcttggtggagtatttccggcgctgcctgattgagatattt
ggaatcctgaaggaatatgaggtgggagacccagggcaaagaacactattagatcccgaa
aggttctgcaaatcgtcagcttcctctcatgaagaaggggaggaggatgatgaaccacgg
agcctgaactgtgaggaggaagaggatgaggaagaggaggaggctgcgttttcgagcaag
gacaaagcacctctagagagcagcgaggaaaaactagttagtaaatttgacaagcttcca
gtcaaggtcgtgcagaaaaacgacccgtttgtggtagattattcagacaagttggggcga
gtgcaggagttcgaaagcggactgctgcactggcggattggcggcggagataccaccgag
cacattcagacccactttgagagcaagacggagctacctttgactcataaacgagcttcc
tgcaactctgtcttgaggaaacgttcggcagctgagagcaatccgagcactagggaagga
gagactcctccatccgacagctcctcggagaagaggataactgccaccatggacgacatg
ctttcggcacgtccgggctccctggcaggggaggaggaagaggtcaaagctttggaaacg
gcgaaggaaagcagcaagtttccctttggcattagtccagctcagagccacagaaatata
aaaattctggaagatgaacctcacagtaaagacgagacgcccctctgcaccctcctagac
tggcaggactctctggcgaagcgctgcatctgcgtctctaacatcatcaggagtttatcg
tttgtgccgggcaatgactttgaaatgtctaaacatcccgggctgctgctgattctaggg
aagctgattctcttacaccacaagcatccagaacgcaaacaggcgcccctgacctatgag
aaagaggaggagcaggaccaaggggtgagctgcaacaaggtggagtggtggtgggactgc
ttggagatgctgcgtgaaaatacactggtcacgttggccaacatttctggccagctggac
ctctccccttacccggaaagcatctgtttgcctatcctggatggactcctccactgggca
gtctgtccatcagcagaggcccaggatccctttccaacactggggcccaatgcggtcctc
tcccctcagagactggttttggaaacactcagcaaactcagcatccaggacaacaatgtg
gatttgattcttgcaactccccccttcagtcgcttggagaagctgtacagcaccatggtg
cggttccttagtgacagaaagaacccggtgtgtcgagagatggctgtggtactactggcc
aacttggcacagggggacagcctggcagcaagagcgattgctgtgcagaagggcagcatt
ggcaacttgctgggcttcttggaggacagcctggccgccacgcagttccagcagagccag
gccggcttgatgcacatgcagaacccgccctttgagtcgacgagcgtggacatgatgcgc
cgagctgctcgggcgctgctcgccctggccaaggtggacgagaaccactcggagttcacg
ttatacgagtcgcggctgttggacatctccgtgtcgcctttgatgaaccctttggtttca
caagttatttgtgatgtactgtttttaattggccagtcatga
DBGET
integrated database retrieval system
