Pelecanus crispus (Dalmatian pelican): 104031609
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Entry
104031609 CDS
T08340
Symbol
COL18A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XVIII) chain
KO
K06823
collagen type XVIII alpha
Organism
pcri
Pelecanus crispus (Dalmatian pelican)
Brite
KEGG Orthology (KO) [BR:
pcri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcri04147
]
104031609 (COL18A1)
00535 Proteoglycans [BR:
pcri00535
]
104031609 (COL18A1)
00536 Glycosaminoglycan binding proteins [BR:
pcri00536
]
104031609 (COL18A1)
Exosome [BR:
pcri04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104031609 (COL18A1)
Proteoglycans [BR:
pcri00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
104031609 (COL18A1)
Glycosaminoglycan binding proteins [BR:
pcri00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104031609 (COL18A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
104031609
NCBI-ProteinID:
XP_009481920
LinkDB
All DBs
Position
Unknown
AA seq
834 aa
AA seq
DB search
MATLGVVSCQGVIADLKLQGDPQAAEHQCDEEEDDTEEVSGDFGSGTEGGHQPSGKDRGV
PGLVDAVPVTSPPVAAGTGSKAHQWGHGQGDRPXALPGPFSLSAGTGPKGEKGEKGERGL
KGDSGTSSIVGTGSVKGEKGEKGELGIKGSAGFGYPGSKGQKGEPGNPGPPGTLSRHTDS
LMVEQVTGPPGPPGKDGAPGRDGKPGDPGEDGKPGDMGPQGFPGMPGEPGLKGEKGDPGM
GPRGSPGPPGPPGPPGPSSRHDKLTFIDMEGSGFSSDLESLRGPRGPPGPPGPPGVPGLP
GEPGRFGMNHTDLPGPPGLPGRDGTPGPPGPAGPQGPPGRDGAAGQPGPKGERGDVGDLG
LPGAPGPKGSKGEMGPAGAPGEMGLAGLPGPIGPRGQPGPPGPPGPPGPGYEAGFGDMEG
SGLPFAASSPGPPGPEGPQGMPGLPGVKGEVGSPGQPGLPGPKGDAGMPGVDGRPGLEGF
PGPQGPKGDRGSPGEKGERGQDGVGLPGPPGPPGPPGQVIAVSSRDKSLAALPGPEGRPG
HAAFPGPVGPKGDQGSPGPQGSPGLKGEKGEPGVIISPDGAVVTAKVKGEKGEPGLRGAM
GPSGPQGRAGMKGEIGFPGRPGRPGMNGLKGEKGEPADVSSMLGLRGPPGPPGPPGPPGP
PGSIVYDSSNAFSDSSHPVLPAFPGFHQFPGQKGEKGDAGAPGPPGHFPYDLSHFSANLR
CDKWEAGPKGEKGEPGSTPLYGPSISGLPGPPGPQGYPGLPGPKGDSIIGPPGPPGPQGP
PGVGYEGRQGPPGPPGPPGPPSFPGPHRQAVSIPGPPGPPGPPGPPGTSGTSLG
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggcaacccttggcgtggtttcctgccagggggtgattgctgacttgaagctgcaaggg
gacccacaggcagctgagcaccagtgtgacgaagaggaggatgacactgaggaggtctct
ggtgattttggcagcgggacagaaggtggacaccaaccctcagggaaagacaggggtgtt
ccggggcttgtggatgctgttcctgtcacctctccccctgtggcagcgggcaccggctcc
aaggcacaccagtggggacatgggcagggtgaccgtccctgagcactaccgggtcccttt
tccctttccgcaggcaccggccccaaaggcgaaaagggggagaagggcgaacgtggcctg
aaaggggactcggggaccagcagcatcgtggggacgggcagtgtcaagggtgaaaagggg
gagaaaggagaactgggcattaagggcagtgctggatttggctaccctggctccaagggc
cagaaaggggagcctggcaaccctggcccccccgggaccctgtcgcggcatactgacagc
ttgatggtggagcaggtcactggtcccccagggccaccggggaaagatggagcccctggc
agggatggcaaacctggtgatcctggcgaggatggcaaacctggcgatatgggaccgcag
gggttccctgggatgccgggggagcccggtctgaagggggagaagggtgacccaggcatg
gggccaaggggatcccctggaccacctggtcccccgggaccaccaggaccctcttccagg
catgacaagctgaccttcatcgacatggagggctctggcttcagcagtgacctggagagc
ctgcggggtccacgagggccacccggtcccccagggccacctggtgtgcctggtttgcca
ggggagccaggacggtttgggatgaaccacacggacttgccaggaccgccagggctgcca
ggcagggatgggacccctgggcccccagggccagcgggtcctcagggtcctcctggaaga
gacggggcagctgggcagccagggcccaaaggagagcggggtgatgtgggtgacctcggc
ctccccggtgcaccgggacccaagggcagcaagggagaaatgggaccagcaggagccccg
ggagaaatggggttagctggccttcctgggcccatcggaccccgagggcagccggggccc
cctggtcccccaggaccaccggggcccggctacgaggctggatttggtgacatggagggt
tcggggctgccatttgccgccagctcccctggaccaccaggacctgaaggaccacagggg
atgccaggactgccaggggtgaagggggaggttggcagccctgggcagcctggcttgcca
gggccaaagggagatgctggcatgcctggtgtggatggccgccctggactggagggcttc
cccggaccacagggacccaaaggtgacagaggcagccccggtgagaagggtgagcgaggc
caagatggtgtggggctgcctggccctcctggtccacctggtccccccggacaggtgatt
gctgtctcgagcagagataagtctttggcagctttgcccggtccagagggcagaccaggt
cacgctgccttcccgggcccagtgggaccgaaaggagaccaggggtcacctggtccccag
ggctccccaggcttgaagggggagaagggggagcctggcgtcatcatcagccccgatggg
gctgtggtcactgcaaaggtgaaaggagaaaagggggagccggggctgcggggagccatg
ggaccctcgggtccccagggacgagcagggatgaagggagagatcggctttccaggcaga
cctggacgtcctggcatgaacgggctgaagggcgagaagggtgaacctgcggatgtcagt
agcatgctgggcttgcggggtcccccgggacccccaggtcccccaggcccccctgggcca
cctggcagcatagtctacgacagcagcaatgccttcagcgactccagccatcctgtgctg
ccagccttccctggtttccaccagtttccaggacaaaagggagagaaaggcgatgctgga
gccccgggacctccaggccacttcccctatgacctgagtcacttcagtgccaacctgcgg
tgtgacaagtgggaggcaggtcccaagggtgagaagggtgagccaggcagcaccccgctc
tacggtcccagcatctctggactgccagggcctccggggccccagggctatcccgggctt
ccgggtcccaagggggacagtatcattgggccgccagggcctcccggacctcagggcccc
cccggtgtcggatatgaggggcgccagggcccccctggccctcctggcccccccggtcca
ccctccttcccaggcccccacagacaagctgtcagcatccctggcccccccggaccacca
ggaccccctggaccaccaggcaccagtgggacatccttgggg
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