Pelecanus crispus (Dalmatian pelican): 104031763
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Entry
104031763 CDS
T08340
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
pcri
Pelecanus crispus (Dalmatian pelican)
Pathway
pcri03030
DNA replication
pcri03420
Nucleotide excision repair
pcri03430
Mismatch repair
pcri03440
Homologous recombination
pcri03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104031763 (RPA1)
03420 Nucleotide excision repair
104031763 (RPA1)
03430 Mismatch repair
104031763 (RPA1)
03440 Homologous recombination
104031763 (RPA1)
03460 Fanconi anemia pathway
104031763 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcri03000
]
104031763 (RPA1)
03032 DNA replication proteins [BR:
pcri03032
]
104031763 (RPA1)
03400 DNA repair and recombination proteins [BR:
pcri03400
]
104031763 (RPA1)
Transcription factors [BR:
pcri03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
104031763 (RPA1)
DNA replication proteins [BR:
pcri03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
104031763 (RPA1)
DNA repair and recombination proteins [BR:
pcri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
104031763 (RPA1)
MMR (mismatch excision repair)
104031763 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
104031763 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RADX
CATSPERD-E_C
DUF4939
IBR
Motif
Other DBs
NCBI-GeneID:
104031763
NCBI-ProteinID:
XP_009482136
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MQGEKVSKPVLQVINTRAIATGNGPPRYRVLMSDGVNTLSSFMLATQLNSLVEEERLSAQ
CICQINKFIVNSLKDGRRVVILMDLDVLKTADKVGGNIGNPVPYNEGEWQGQQRSSASAA
NPAPSKPQQQNGNFSVPGPAAPKYHAPSNQFAKASAPSSAKTPGGSQAKVVPIASLNPYQ
SKWTICARVTQKGQIRTWSNSRGEGKLFSIELVDESGEIRATAFNDQADKFFPLIELNKV
YYFTKGNLKTANKQYTAVKNDYEITFTNETSVVPCDDAQHLPSVQFEFVSISDLENTPKD
SIVDVIGICKSYEDVTKITVKANNREVSKRNVHLMDTSGKLVTATLWGNEAEQFDGSRQP
VVAIKGARVSDFGGRSLSVLSSSTVVINPDSPEAFKLRGWFDSEGQLLECASISDVRGGP
AAGTNTNWKTLFEAKSENLGQGDKADYFSCVGTVVHLRKENCMYQACPSQDCNKKVIDQQ
NGLYRCEKCDREFPTFKYRMMLLVTIADCLEYQWVTCFQESAEFILGQNAAFLGELKEKN
EQAFEEVFQNANFNTYEFRIRVKLETFNDESRIKATAVDVKPVNYREYSKRLIASIRRNA
QLG
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgcagggggagaaagtctccaagcccgtgctgcaagtcatcaatacacgggctattgct
acaggaaatgggccaccacgttaccgagtgttgatgagcgatggggtcaacacactctcc
tcattcatgttggcaacacaactgaactctctggtggaagaggaacgcttatcagcccaa
tgtatttgccagattaacaaattcattgtcaacagcctgaaagatggaaggagagtggtt
atactgatggatttagatgttctgaaaactgctgataaggttggtgggaatattggcaat
ccagtgccatacaatgaaggtgagtggcaagggcagcaacgttcttcagcttcagcagca
aatccagcacccagcaaaccacagcaacaaaatggcaatttttcagtaccaggtcctgct
gctccaaagtaccatgctccctcaaaccagtttgctaaagcgagcgctcccagctcagcg
aagacgccggggggatcgcaggccaaagtagtgccgattgccagcttgaacccataccaa
tctaagtggaccatttgtgctcgtgttacccaaaaaggccagatccgcacgtggagcaac
tcccgtggtgaaggaaagctcttttctatagagctagttgatgaaagcggtgagattaga
gctactgcattcaatgatcaagcagacaagttctttccactcattgaattgaacaaggta
tattattttaccaaaggcaatttgaagactgctaacaagcaatatacagctgttaagaat
gactatgagattacattcactaatgagacttcagttgtgccctgtgatgatgcccagcat
cttccgtctgttcagtttgagtttgtatccatctctgacttggagaacacacccaaagac
tcgattgttgatgtaattggaatttgtaagagctatgaagatgtcactaaaattacggtg
aaagctaacaatagggaggtatcgaagaggaacgtgcatctgatggatacatcagggaaa
ctggtgacagctacgctatggggaaacgaggctgaacagtttgatggttctagacagcct
gtggtagccatcaaaggagccagagtctctgattttggtggtagaagcctgtctgtccta
tcctcgagtacagttgtcatcaaccctgatagcccagaggcttttaagctccgaggatgg
tttgactctgaggggcagcttctggaatgtgcctcgatctctgatgtgaggggtgggcca
gcagctgggacgaataccaactggaaaactttgtttgaagccaaatctgagaacttggga
caaggagataaggcggattattttagctgtgtgggcacagttgtacatctgcgcaaagag
aactgtatgtaccaggcatgtccctctcaggattgcaataagaaagtgatagaccaacaa
aatggactctatcgttgtgaaaagtgtgatcgtgagttccccaccttcaagtaccgcatg
atgcttctggtgaccattgcagactgtctagagtatcagtgggtgacttgtttccaagag
tcagcagaattcattcttgggcaaaatgcagcttttctgggagaactgaaggaaaagaat
gagcaggcatttgaagaagtgttccaaaatgcaaacttcaacacgtatgagttcaggatc
cgagtaaagctggagactttcaatgatgaatctcgtattaaggctacagcagtggatgtc
aaaccggtgaactacagagaatacagcaagaggttgatcgcaagcatcaggagaaatgct
cagctagggtga
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integrated database retrieval system
