KEGG   Pelecanus crispus (Dalmatian pelican): 104031946
Entry
104031946         CDS       T08340                                 
Symbol
TRIM50
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM50
  KO
K12024  tripartite motif-containing protein 50/73/74
Organism
pcri  Pelecanus crispus (Dalmatian pelican)
Brite
KEGG Orthology (KO) [BR:pcri00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pcri04121]
    104031946 (TRIM50)
Ubiquitin system [BR:pcri04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    104031946 (TRIM50)
SSDB
Motif
Pfam: SPRY zf-RING_UBOX zf-C3HC4_4 zf-B_box PRY zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 zf-RING_5 zf-RING_2 RING_XB3-XBAT31 zf-Nse zf-RING_4 U-box Sina_RING zf-ANAPC11 XRN1_D2_D3 Vps53_N Dynactin_p22 XhlA TRAF3_RING zf-RING_6
Other DBs
NCBI-GeneID: 104031946
NCBI-ProteinID: XP_009482392
LinkDB
Position
Unknown
AA seq 495 aa
MARRMSIDELEDQLLCPICLEVFKEPLMLQCGHSYCKSCVVSLSGELDGQFLCPVCRQTV
DCSASPPNVTLARVIEALQSRGEADPTPESCPMHHNPLSLFCEADQEVICGLCGTIGNHR
QHKITPISTAYCRMKEELSVLLTDVHQYKRNLDEHFSKLINNKSRIANEADVFKWVIRKE
FQELHRYIDEEKATFLESIEGKAAQLITSMESQVKQTSDALQRLKEMQSSLEALSNESQL
DFIRKYGSSQFRSELPSLHPGDGIFNPVSFKPCFHQDDIKMTVWKRLHRRVLPAPETLKL
DPVTAHPLLELFKGDTVVQCGLYQRRDSNPKRFNSSNCILTCKGFSCGQHYWEVIVGTRN
HWRVGNIKCSVSLKGKLSKSPENGVWLIGLKEGKVYEAFSTPRATLPLTARPQRIGIYLH
YEKGELTFYNADNPDELSPIYTFQAEFQGQLYPIVDLCWPERGPYSPPIILPVPAVSRHP
RVPYNHPAPEEPTKP
NT seq 1488 nt   +upstreamnt  +downstreamnt
atggctcggaggatgagcatcgacgagctggaggaccagcttctctgtcccatctgcttg
gaggtcttcaaggagcccctgatgctgcagtgtgggcattcatactgcaagtcctgtgtg
gtgtcactctctggagaactggatggccagttcctgtgtcctgtgtgccgccaaaccgtg
gactgcagcgcctcaccacccaacgtcacactggcccgtgtcattgaggcactgcagagc
cggggtgaggcagaccccaccccggagtcctgcccaatgcaccacaaccccctcagcctc
ttctgcgaggctgaccaagaggtgatctgcgggctgtgcggcaccattggcaaccaccgc
cagcacaagatcactcccatctctaccgcatactgccggatgaaggaggagctgtctgtg
ctgctgaccgatgtccaccagtacaagaggaacctggatgaacacttcagcaagctcatc
aacaacaaaagccgtatcgcaaacgaggcagatgtcttcaagtgggtaatccggaaggag
ttccaggagctacacaggtacattgacgaggagaaggccaccttcctggagagcatcgag
gggaaggcagcccagctcatcacctccatggagtcccaggtcaagcagacatcagatgcc
ctgcagaggcttaaggagatgcagagctctctggaggcactcagcaatgaaagccagctt
gatttcatccggaaatatggctcctcccagttcaggtcagagctccccagcctgcaccct
ggtgatggcatctttaaccccgtgtccttcaagccgtgtttccaccaagatgacatcaag
atgactgtgtggaagcgcctgcaccgccgcgtcctgccagctccagagacgctgaagctg
gacccagtgacagcacatcccctcctggagctcttcaagggcgacacggtggtgcagtgt
gggctctaccagcgccgggacagcaaccccaagcgtttcaactccagcaactgcatcctc
acctgcaaaggcttctcctgcggccagcactactgggaggtgattgtgggaaccaggaac
cactggcgtgtgggcaacatcaagtgctcagtcagcctcaaagggaagctcagcaagtct
cccgagaatggcgtgtggctcattggcctgaaggaagggaaggtctatgaggccttcagc
accccgcgggccaccctgccgctgactgcccggccccagcgcattggaatctacctgcac
tacgagaagggtgagctgaccttctacaatgctgacaaccctgatgagctcagtcccatc
tacaccttccaggcggagttccagggccagctctaccccatcgtggacctgtgctggcca
gagcgagggccctactctccccccatcatcctgcccgtgcctgctgtgagccggcacccc
cgggtgccgtacaaccatcctgcccctgaggagcccacgaagccgtag

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