Pelecanus crispus (Dalmatian pelican): 104032792
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Entry
104032792 CDS
T08340
Symbol
VPS13A
Name
(RefSeq) vacuolar protein sorting-associated protein 13A
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
pcri
Pelecanus crispus (Dalmatian pelican)
Brite
KEGG Orthology (KO) [BR:
pcri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcri04131
]
104032792 (VPS13A)
Membrane trafficking [BR:
pcri04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
104032792 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_M
VPS13_VAB
VPS13_N
VPS13_C
RRM_fung
Motif
Other DBs
NCBI-GeneID:
104032792
NCBI-ProteinID:
XP_009483527
LinkDB
All DBs
Position
Unknown
AA seq
2432 aa
AA seq
DB search
FKLSGQLPLLSIQISDQKLTSILELIDSIPKPESTAATSSPPKITEAAVSPVLSAPHLSQ
GVFPVLDLHSFAESESEEEFYDALSSPVEDMPFFEAPSGSLMRASSTRRKKLRKQESLKN
MTEFQLRFEVAEVLIKLCRLTGNTETPVLQLAIVRLGTELKLRTFDMTANAFLREVCLLC
PEYMDDNDKPVYIITTLDNVEDDLLTLEYIKADINGPELKTAYQNVLQKIKVNFSSLDVH
LHTEALLNAMNYLNNLLPKQETKVAEEPVHEKIEEKKDVLKKLTSKKSKYEDVIDLNICA
DLSCLRIFIREKKHRIAEIHIEGLDSQVIMKKAATEVTAKLKNIIIVDSDEMALYKKALY
ITGKEVFNFRMISYVNATDGIAYTNMDVVDNRIYLTVGCIQVVFVNKFVSSVLAFINNFQ
AAKEALTEATVQAAEKAATGVKELAERSSRLALDINIKAPVVIVPQSAMSANVLVADLGL
ITVKNQFFIAKTKARYNLPPVIDSMTVKLSELKLYRSCYEQGSLQTEVQLLQPLNLEVAV
ERNLAAAWYNEVPDIEISGRLKPMNLILSQEDITTILRTLNENIGGTSGSSTSLPEPKDT
TSHCSDMHSTSQHSAGVTVVTSAVVELHSPMKIRTTLKLDFRFDSLTLVLYSPNSKQVTN
LDQRDDLLKLAEFKLVLMSAAVKMLSDGSMNASVKLANCTLDDKRQSIQKATPRMVEMKH
GFEKKVMVDISYKQGRDGTVLDVIVQEIYLCASMEFLLTVADIFLKANAESAAAQRSLKQ
SLPLKEQAPVQPVSTMEMNIVVKNPEIVFVADLTRSDAPALVVTTQCEVFIKNSPERYSM
TAAVKEIQMKACPFLPEERKGNITTVLQPCDFFFEMKQSGTNPQAADLTIKSLTIKVSPI
IINTVITITSALYQTAETTEEVSQVPPDLWNKKDIKNLKMWFLEESNENEDTSPTAELVP
TGESLKMNIESVFLTLEAGVGHRTVPMLLAKSSFLGEVKNWSTLINLRSRLELEVHYFNE
MFGVWEPLLEPLEIEKTDLFKPWILDIKMKKKAKKALVESDAEEENYKVPEYKTVINVSS
KDQLNITLSKCGLQMLSNLGTAFAEAASQTSDIFKKDRAPFVIINSLGLPITVSPSDSFS
VLNVEFGAKMFHLRDGENLNMEFVRTKNESDQFTAMTTLSSKRFYIQICPHNHSTVEKIP
LTKVGRCIYSVRHEESGVERSIVCQIDTVEGSKMITIRSPIQIRNHFSIPLNIFEEGRCL
GTASPENEFNIPLSSYRSILSLQPLANENGVHGEYDMCEGITFDEIMKNVDSLLQRKCQS
VRSTNHSLIINIVPVKDTLTSSLCAEDQWDFPYVVHLWPSVLLRNLLPYQITYSVEGNGN
KYDTLQEGCSAQIHNAVLDQTKLDLQLLNYLDQSWKSEYHIKSNLPDISFMTFYCITELD
KTELDIAVHVTYTTGQMVIAIHSPYWMVNKTGRMLQYKADGIHRKHPPDYKKPLLFSFQP
KNFLQNNKVQLMVTDSELSDQFSLDTVGSHGSVKCKSRKKEYQVGVTINNSSFNITRIVT
FTPFFMISNRSKYTLEVAEEGKEKWIPIVLQQCIPFWPENDANKLLVRVENSELPPKKIN
FDKQENCLLLHLDNKLGGITVDVNLTEHSTVITFSNYHDGAAPFLLINHTKEEIIEYGQS
SLSELEDCLQPNKAVLYTWADPAGSRKLKWKCGNRTEEITPKEDKMEILSLDCRKVVYLV
SFFEGLQRIVLITEDENVFKLTYESVKAELAEQEIVLSLQDVGISLVNNYTKQEVSYIGI
TSSDVVWETKPKKKSRWRPMSVKQTDKLEQEFKEYSELTPSENKIIELESNVLVCLTPNG
MNMKIQQPNEIPIRRNYLPALKVEYSSSAHQKSFRIQIYRIQIQNQIPGAIFPFVFYPIK
PPKSITLDSAPKPFTDVSIVMRTAGHSQISHIKYFKVLIQEMDLRLDLGFLYALVEFFTQ
TDVPSDQELELFKKDVESLQEELMSVSSMDTSQISLYEYFHISPIKLHLSFSLSTGGEDS
NKEERKNELIPLQSLNLLLTXXXXXXXXXXXLTDVQDVVFKLAFFELGYHFCTTQQLQSA
VVRHYSKQAIKQMYVLILGLDVLGNPFGFIRGLSEGVEAFFYEPYQGAIQGPEEFIEGMA
LGLKALVGGAVGGLAGAASRITGAMAKGVAAITMDEDYQQKRREAMNKQPTGLREGITRG
GKGLVSGFVSGITGIVTKPIRGAQKEGAAGFFKGVGKGLVGAVARPTGGIIDMASSTFQG
IKKVADSSEDVISLRPPRFFGEDGVIRPYRLRDGTGSQMLQKIENGRFAKLRYIAHAMVN
STDLLMVTKSGVLFVTKGTFGQLTCEWQYTYDEFTKEPFIVDGRRLRIEAKERVKSVFHA
KEFGKIINFKSPEDAKWILSKLEEVRENQPKL
NT seq
7300 nt
NT seq
+upstream
nt +downstream
nt
gttcaaactgtctggacagctgcctttactttctatccaaatatcagaccagaagctgac
aagtatcttggagctaattgatagcattcctaagccagaaagtactgctgctaccagttc
tcctccaaaaataactgaggctgcagtatcccctgtgctctcagcaccacatttgtcaca
aggtgtgtttcctgttttggatcttcactcatttgctgagtcagaatcagaagaagaatt
ttatgatgctctaagcagtcctgtggaagacatgccattttttgaagccccatctggttc
cctcatgagagctagcagtacaaggcgaaaaaagctacgtaaacaagagtctttgaaaaa
tatgacagaattccagctaaggtttgaagtagctgaggtcttaattaaattatgccgtct
tactggtaatactgagacacctgtgctgcagcttgcaattgtacggttaggcactgaact
taaattaagaacatttgacatgactgcaaatgctttccttcgagaagtttgtctgctgtg
cccagagtatatggatgataatgataaaccagtttacataattactactttggataatgt
agaagatgatcttctcactctggagtacataaaggctgatattaatggaccggaattgaa
aactgcctatcagaatgttctacagaaaataaaggtgaacttttcatctctagatgttca
tttgcatactgaagctctgctgaatgctatgaactatctgaataatcttctacccaaaca
agaaactaaagttgcagaagaaccggtccatgaaaaaatagaggagaagaaggatgttct
taagaaattaacatcaaaaaaatcgaagtatgaggatgttatcgacctcaatatctgtgc
ggatttatcctgtttacgtatctttattagagagaaaaaacatagaatagctgaaattca
catcgaaggtctggatagccaagtgatcatgaagaaagcagcaactgaagtgactgcaaa
attaaagaatatcattattgtggattctgatgagatggcattgtacaaaaaggctcttta
catcacaggaaaagaagtcttcaacttcagaatgatatcatatgtgaatgctacagatgg
cattgcatatacaaatatggatgttgttgacaatcgtatttacctaactgttgggtgtat
tcaagtagtttttgtcaacaagtttgtttcatctgttttggcttttataaataactttca
agctgccaaggaagctcttactgaggcaactgttcaagcagcagagaaagcagctacagg
tgtaaaagagctagcggagcgtagttcccgtttggcactagatatcaatattaaagcacc
tgttgtgatagttccacagtcagcaatgtctgcgaatgtcctggtggctgatcttggtct
catcactgtgaagaaccaattctttatcgctaaaacaaaagcacggtataatctcccacc
tgttattgactctatgacagtgaaattgagtgaactaaagttatacagatcatgctatga
gcagggttcattgcaaactgaagtacagttgctgcagccactcaatctggaagtagctgt
tgaacgaaatttagctgctgcatggtataatgaagttcctgatattgaaatatctggccg
actcaagcctatgaatctaattctcagtcaggaagatattaccacaatattgaggacact
aaatgaaaatataggtggaacatctggttcatcaacatctttaccagaaccaaaagatac
gactagccattgtagtgatatgcatagtacttcacagcactccgcaggtgtaactgttgt
gacatcagctgtggtggaactgcattcaccgatgaaaataagaacaacactaaaactgga
cttcagatttgactctctgactttggtattgtacagtccaaattcaaaacaggttacaaa
tttggatcagagagatgaccttttgaagcttgcagagtttaagttagttttgatgtcagc
tgctgtcaaaatgttatcagatggttcaatgaatgcttcagtcaagctggcaaactgtac
attagatgataaaagacagtcaatccagaaagctacaccaaggatggtggaaatgaaaca
tggatttgaaaagaaagtcatggtggatataagctataagcaggggagagatggcactgt
tcttgatgtgattgttcaagagatatacctttgcgcaagcatggagtttctacttactgt
tgcggatatattcctaaaggctaatgcggaaagtgctgctgcacagagaagcctcaaaca
gtcattacctttaaaggagcaagcacctgtgcagcctgtgtctacaatggaaatgaacat
tgttgttaaaaatccagagattgtgtttgtggccgatttaacaagaagtgatgctcctgc
attggtggttacaacacagtgtgaggtcttcattaaaaatagccctgaaaggtatagcat
gacagctgctgttaaagagatacaaatgaaagcatgcccatttcttccagaagaaaggaa
agggaacattactacggtattacagccttgtgacttcttctttgaaatgaaacagtcagg
tactaatccacaggcagctgatctaacgattaaatctctaacaataaaagtttcaccaat
aatcataaacacagtaattactattacatcagccctttatcaaactgcagaaacaacaga
agaggttagtcaagttcctccagacttgtggaataagaaagatataaaaaatctaaaaat
gtggtttcttgaggagtcaaatgaaaatgaagacacaagtccaaccgctgaactggttcc
cacaggagagtcattgaaaatgaatatagaatctgtttttctaacacttgaagctggggt
tgggcaccgaactgtaccaatgcttttagccaagtcctcatttcttggagaagtcaaaaa
ctggagtactctcatcaacctacgttctcgtcttgagctagaggtacactattttaatga
gatgtttggggtgtgggaacctttgcttgaaccactagaaattgagaagactgatttatt
caaaccatggatccttgacatcaagatgaagaagaaggctaaaaaagcattggttgaatc
agatgcagaagaagaaaactataaagttccagaatataaaacagtaataaatgtttcctc
aaaagaccagctgaacattacactatccaaatgtgggctacaaatgttgagtaatttagg
cacggcatttgctgaagcagctagtcaaacttcagacatcttcaaaaaagaccgagcacc
atttgtaataataaattctttaggacttcccatcactgtctcgcctagtgattcctttag
tgtccttaatgttgaatttggagcaaaaatgtttcatttaagagatggagagaatttaaa
tatggaatttgtcagaactaaaaatgagagtgaccagttcacagcaatgacaactctgag
tagcaagaggttttacattcagatctgtccacataatcattccactgtggaaaagattcc
attgacaaaagtaggtcgatgcatttacagtgtgagacatgaggaatcaggtgttgaaag
gtccattgtctgccaaattgatactgttgaaggaagcaagatgataactatacgttctcc
tattcagataaggaatcatttttcaatcccattaaatatttttgaggaaggaagatgttt
agggactgcttcaccagaaaacgaattcaacataccattgtcgtcttacagatccatact
gagtttgcaaccgctagccaatgaaaatggagtgcatggagaatacgatatgtgtgaagg
aattacatttgatgaaattatgaaaaatgttgacagtttattacaaaggaagtgccagtc
tgtgaggtcaactaaccactcacttatcatcaatattgttcctgtaaaagacacattgac
atcttcattatgtgcggaagatcaatgggattttccctatgtcgttcatttatggccttc
tgttcttctccgcaatcttcttccttatcagataacttattctgtagagggaaatgggaa
caaatacgacactctacaagaaggatgttcagcccaaattcataatgcagtcttggatca
aacaaaactagatttgcagttgcttaactatcttgatcaaagttggaaaagtgagtacca
tataaaaagcaacctaccagatatcagcttcatgacgttttactgcatcacggagttgga
taagactgaactggatattgctgtccacgtgacctacacaactgggcagatggttatagc
aattcacagtccgtactggatggtaaataaaaccggacgaatgttgcaatacaaagctga
tggtattcaccgcaagcatcctccagattacaaaaagccactccttttttctttccaacc
caaaaacttcctccagaataacaaggtgcaacttatggtaactgacagtgaactgtctga
tcagttttcactggacactgttggaagtcatggctctgtgaaatgcaagagtcgtaaaaa
ggaatatcaagttggtgtcaccataaacaacagcagttttaatattactagaattgtaac
tttcactccattttttatgatctcaaatagaagcaaatacactttggaagtagctgaaga
aggcaaggaaaagtggattcctattgtcttgcaacagtgcattcccttttggcctgaaaa
tgatgccaacaaactgcttgttagagttgaaaattctgaactccccccaaagaagataaa
ttttgataagcaagaaaactgtctgctactgcatttggacaacaagcttggaggaattac
agtggatgttaatctgactgaacattctacagtgattaccttttctaattaccatgatgg
cgcagctccatttctcttgataaaccatactaaagaggaaattattgagtatggacagag
ctccctcagtgaattggaagactgtcttcagccaaataaggcagtattgtatacttgggc
ggacccagcaggatctagaaaattaaaatggaaatgtggaaatagaactgaggaaattac
cccaaaagaggacaaaatggaaatactcagcctggactgtagaaaagtggtctatttagt
gtcattttttgaaggtttgcagcgtattgtcctgatcactgaagatgagaatgtatttaa
attgacatatgaaagtgtaaaagcagaactagcagaacaagaaattgttctgtctttgca
agatgttggaatttcattggttaataattatacaaagcaagaggtgtcctatattggaat
tacaagttctgatgtggtttgggagacaaaacccaagaagaagtcaagatggagaccaat
gagtgttaagcagactgacaaattagaacaagaattcaaagaatacagtgagctaactcc
ttcagaaaataagattattgagttggaatcaaatgttttggtatgtttaacacctaatgg
aatgaacatgaaaattcaacaaccaaatgagattcctatcagaaggaattatctgccagc
tttaaaagtagaatacagttcatctgcacatcagaagtctttcagaattcaaatttacag
gatacagatacaaaaccagattcctggagccatatttccctttgtgttctatcctattaa
acctccaaagtccatcaccttggattcagcaccaaaaccatttactgatgtcagtattgt
catgaggactgcaggacattcacaaatatctcatattaagtattttaaggtcctgattca
agagatggatctcagattagatcttggcttcctgtatgcactggttgaattctttacaca
gactgatgtgccgagtgaccaagagctagaacttttcaaaaaggatgttgaatctctcca
agaagaactgatgagtgtgtcatccatggatacgtcacaaatcagcttgtatgaatactt
tcatatctctccaattaagttacacttaagcttctcactcagtactggtggagaagatag
taacaaagaagaaagaaagaatgaattgataccacttcagtccttgaatctcctgctgac
gagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctcacagatgtacaagatgttgtctt
taagttggctttctttgaacttggctatcacttctgtactacacaacagctccaatcagc
agttgtaagacattattcaaaacaggctattaaacagatgtatgttcttattcttggcct
tgatgtcttgggtaatccatttggattcataagaggcttgtctgaaggagtagaagcatt
cttctatgaaccttaccagggagccatccagggtcctgaagaatttatagaagggatggc
actaggtcttaaagcactagtagggggagctgttggtggattagctggtgctgcatcaag
aatcactggtgctatggcaaaaggagtagctgcaataactatggatgaagattaccagca
gaaaaggagagaagccatgaataaacagcccactggtctgagagagggtatcactcgtgg
cggaaaaggattagtttctggttttgtcagtggcataacaggaatagttacaaaaccaat
aagaggagctcagaaagaaggagcagctggttttttcaaaggtgttggaaaaggcttagt
gggagcagtagctaggcctactggaggaatcatagacatggcaagcagcacatttcaggg
tattaaaaaagttgcagattcatcagaagatgtgataagcctgcgcccgcctcgcttctt
tggtgaagatggagttattagaccttacagattaagagatggaaccggaagtcaaatgtt
acagaaaattgaaaacggaagatttgcaaaactcagatatattgcacatgctatggtcaa
cagtacagacctgttaatggtaacaaaaagtggtgtgttatttgtgacaaaagggacatt
tggacagctgacatgtgaatggcaatacacttatgatgaatttaccaaagaaccattcat
cgttgatggcagaagattacgcattgaagccaaggaacgagttaagtctgtgttccatgc
caaagaatttggaaaaattattaattttaaaagtccagaggatgctaagtggatcctttc
taaactggaagaagtgagagagaatcagccaaaattgtaa
DBGET
integrated database retrieval system
