Pelecanus crispus (Dalmatian pelican): 104033158
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Entry
104033158 CDS
T08340
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
pcri
Pelecanus crispus (Dalmatian pelican)
Brite
KEGG Orthology (KO) [BR:
pcri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcri03036
]
104033158
Enzymes [BR:
pcri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
104033158
Chromosome and associated proteins [BR:
pcri03036
]
Eukaryotic type
Gene silencing
piRNA pathway
104033158
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
Helicase_C_2
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
104033158
NCBI-ProteinID:
XP_009483991
LinkDB
All DBs
Position
Unknown
AA seq
1193 aa
AA seq
DB search
MEVLVLEIEDPGCFWVTMKGCGPYIVDEIEYKNLNAEMNQFYDKSYKDADEVKPVTVEEG
QICVVFSEELKCWCRAVIKSIMYCTDDYQAECFLLDYAKYIFVKSKDIRVALEAFMQIPY
RAKKCRLYRTKPVTLRIDFCEDTAKIVPAKRWDSAATQYFQNLLKATTQMKAKLCAVEDN
TFDVFLYVTIKDEKVCVNDDLVSKNFARFEEAEENTGSSADYQENQTSLNVESLPVKIVN
PALAFRPVLFQEKVSTNLETGLAVSSSFLEETYQRSSTDLNENTAPSFQNLSEEQNVFLS
NKIEPSSTLETAPLFDDLKKELTRKKFSGPNFTESYCWPPVARGCDVVAISYQGNDPFLY
IPPVLTFLQLGSCYKALPNRNGPLALILCPGWKKAQLVFELLKTYERCSRHLHPMLIILG
QNKEEARSMKIRGCEVIVTTPYSLLRLFEHHRLLFCRLCHLVLDEVDVLFSDATEQIFTI
LDYYKKAIITEEWEYSPHQIIAVGTHWNKHIAHLIKEFMNDPYIVITAMEEASIYGKVRQ
IVRPCTNSERTAVLLQMLDFTHNDLQKVLVFTNSVNEAEMVHKALKSNSIFSLKIHKESE
FNFKYVLEQWTKKYSSGAPVVLVLTDDCIQSLGITDATCVIHFSFPSPRIFAQRLHSMSD
NFCNVIKDSSVDQEYTKARSVILLTENSAYHALGILHYLQHAEAEIPPELHDFTAKTLEA
EEDKKFSRPLCGYLKTFGICKNRRVCPDRHQINLQVDVAQNIPDKIIQTPGCVTILPLHI
VNATNYFGRIVDKQKDQYTILAEEINEYFKKPSNKISVKNVEKLALYGLCEKTLFHRVQV
VEISPKEEENSFFNIKIKYIDEGRTSQVQSYQLLHLPARFQCLPPQAVEFVVCRVKPIDN
EIEWNPKVTDYIHHKIKGKLHEAKIVHTLGNTAWVDPMVRVTRLSDLKMSINEYNIRSEI
LSTGLGTDNPEHITQLQKLCGYMKVLDHAEDLEPLSIKEDTAGPENVSNPQNMSIQENST
ENGNSSKIIFGNHPCDGVAQTKEAEDSTLCQRKCFYPEIKWFQNEETVTVKVKITSVADC
KCDFTKEKVVFSACSGDKLYLADMELHQDILAEKSTCVIKDKEAIIVLTKEKKGAWCKLL
KNKNPHVSFDFEHWEDFEDRSPFPVGTKKLYCTAAVTEELVDSSEDSGTDSDE
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcttggtattagagattgaagatccaggttgcttttgggttactatgaaagga
tgtgggccttacatagttgatgaaatagaatataaaaacctgaatgctgaaatgaatcag
ttctatgacaaatcttataaagatgcggatgaagtaaaaccagtaacggtagaagaaggc
cagatttgtgtggttttcagtgaggaactcaaatgctggtgtagagcggttattaagtca
atcatgtactgtacagatgattatcaagcagaatgttttcttctggattatgccaaatac
atttttgttaaatcaaaggacattcgagttgcactggaagcatttatgcagatcccatac
agagcaaaaaagtgtagactgtatcgcacaaagccagtgacattgcgtatcgacttctgt
gaagatactgcaaaaattgtaccagccaaaagatgggatagtgctgctactcagtatttt
caaaaccttctcaaagcaactacccaaatgaaagccaagttatgtgctgtagaagataac
acatttgacgtttttctttacgtgacaataaaagatgaaaaggtatgcgttaatgacgat
cttgtctcaaagaactttgctcgttttgaggaagctgaagagaatacagggagttctgca
gattatcaggagaaccaaacatcgttaaatgttgaatctcttccagtgaaaattgttaat
cctgcgcttgctttcaggccagtgctgtttcaggagaaggtatcaacaaatcttgaaaca
ggtcttgctgtttccagttcctttcttgaagagacataccaaaggtcaagcacagatcta
aatgagaatactgcacctagttttcaaaatcttagtgaagaacaaaatgtctttcttagc
aacaaaattgagccatcgtcaactctggaaacagcaccactttttgatgatctgaaaaag
gaacttactcggaaaaaattttcaggccctaacttcacagaatcttactgttggccgcca
gtagctcgaggttgtgatgtagttgccatctcatatcagggaaatgatccttttttatat
attccaccagttcttacatttttgcagttgggaagttgctacaaagccttgccaaacagg
aatggaccactagcacttattttatgtcctgggtggaagaaagcacaacttgtttttgag
ctactgaaaacatacgagagatgctccagacatcttcatccaatgttgataatacttggg
cagaacaaagaagaagctagaagcatgaaaatccgaggatgtgaagtaatcgtgactaca
ccgtacagcctcctgagattgttcgaacatcacagattattgttttgtagactttgccat
cttgttcttgatgaggttgatgtactgttctctgatgctactgaacagatttttactata
ttagattattacaagaaagccattattactgaagagtgggagtattcacctcatcagatt
attgctgttggaactcattggaataaacatatagcacacttgataaaggagttcatgaat
gatccttacattgtgataacagctatggaagaagcttccatctatggaaaagtgcgacag
attgtgcgaccgtgcacaaacagtgaaagaactgctgtgttactccaaatgctggatttt
acccacaacgatcttcagaaggtgctggtattcactaattcagtaaatgaagcagaaatg
gttcataaggcactgaagagcaattcaatattttccttgaaaatacataaagagagtgag
tttaatttcaagtatgtcttagagcagtggacaaaaaagtatagttctggcgctcctgtt
gtgttagttttaacagatgactgcatacagtctttgggaattacagatgcaacttgcgtg
atacatttcagttttccttctccaagaatctttgctcagcgtctacacagcatgtctgac
aacttctgtaatgtgataaaggattcttctgtagatcaggaatatacaaaggcaaggtca
gtcattctgctaacagaaaacagtgcatatcatgcacttgggatcctgcactatttgcag
cacgcggaagctgaaattccaccagagctgcatgattttactgccaagacgctagaagct
gaagaagataagaaattttcaaggccactgtgtggctatcttaaaacatttgggatttgc
aagaatagaagagtgtgtccagatcgtcatcaaattaatttacaagtagacgtggcccag
aatataccagataaaattatacaaacacctggatgtgtcacaatactgcctctccacatt
gtaaatgcaacaaactactttggtcgaatagtagataaacaaaaggaccaatatacaatt
cttgctgaagaaattaatgagtattttaagaaacctagtaataaaatttctgttaaaaac
gtggagaagctagcactttatggattatgtgagaaaacactttttcacagggttcaggtg
gtagagatttccccgaaagaggaggaaaattcgttctttaacatcaaaattaaatatata
gatgaaggcagaacaagtcaagttcaaagctatcagctgcttcacttacctgcgaggttt
cagtgtctgccacctcaggctgtggaatttgtagtttgtagagtgaaacccattgataat
gaaattgaatggaacccgaaggtaactgattatattcatcacaaaattaaaggaaaacta
catgaagcaaaaatagtacataccttgggaaacacagcttgggttgatccaatggtccga
gttaccaggctttcagatttgaagatgtctatcaatgaatacaacattcgatctgagatt
ttgtctacgggcctggggactgacaatccagaacatataacacaacttcagaagttatgt
ggatacatgaaggtattggatcatgcagaggacttggagcctttaagcataaaggaagat
acagctggtccagagaatgtgtccaatccacagaatatgtcaatacaagaaaattctact
gaaaacggtaattcttctaaaattatttttggaaatcatccatgtgatggtgtagctcaa
actaaggaagcagaagactctaccctgtgtcagcgtaaatgcttttatccagaaataaaa
tggtttcaaaatgaagagactgttacagtgaaggtaaaaataacaagtgtagctgactgt
aaatgtgacttcactaaagagaaggtggttttcagtgcttgttcaggagacaaactttat
ttggctgacatggagctgcatcaagatatacttgcagaaaagtctacgtgtgtgattaag
gataaagaggctattattgttctcacgaaagagaaaaaaggagcgtggtgcaaattactg
aagaacaagaatcctcatgtgtcttttgattttgaacactgggaagattttgaagataga
agtccttttccagttggtacaaaaaaattgtattgcactgctgcagtaaccgaagaattg
gttgactcctcagaagacagtggaacagacagtgatgagtaa
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