Pelecanus crispus (Dalmatian pelican): 104033948
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Entry
104033948 CDS
T08340
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
pcri
Pelecanus crispus (Dalmatian pelican)
Pathway
pcri03250
Viral life cycle - HIV-1
pcri04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
pcri00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104033948 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
104033948 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcri03400
]
104033948 (SAMHD1)
DNA repair and recombination proteins [BR:
pcri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
104033948 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
HD_assoc_2
PDEase_I
Pdc1_Ge1
TMEM215
Motif
Other DBs
NCBI-GeneID:
104033948
NCBI-ProteinID:
XP_009485036
LinkDB
All DBs
Position
Unknown
AA seq
659 aa
AA seq
DB search
GGLLRKQDFAVCPDRIQACGRVAEFGGHHELPRHVAVGIPRWLPYGCSDTPGTCGRQAPR
VLSVGRQDGQRGSASNRVVQVAELNGYEELSAAGRARDDGGLETALWVSRAFPCSWKWTF
CVACCMLNTDDDLPDERLKVLACLNKLQQQYMDVMKVFNDPIHGHIEIHPLLVRIIDTPQ
FQRLRYIKQLGGTYMVFPGASHNRFEHSIGVGYLAGCLVRELKERQPELDITQRDILCVE
IAGLCHDLGHGPFSHMFDGRFIPLTRPGLKWKHETASVEMFEYLVTSNKLEEVMKSYGLV
LEEDMIFIKEQIGGPIDETACEKSWPYRGRQKEKSFLYEIVANKKNGIDVDKWDYFARDC
HHLGIQNNFDHKRLLKFTRVCEVGNQKHICTRDKEVGNLYEMFHTRNCLHRRAYQHKIGN
IIEIMITEAFQKADRFFKIEGSGGKLYQISTAMEDMEAYTKLTDNIYLEILHSSSPELKE
AREILRKIERRELYKFLGETQPETVRKIVKNESLAASIANSKPEKDPPDVELKAEDFIID
VINMDYGMKEQNPIDNVLFYCKADPSKAVRIAKEQVSKFLPMTFAEQVIRAYCRSQNTDT
VSAAKQYFIQWCIENDFTKPQDSDVVAPHLTPMKRSWNNMRGGEHRTDSEPSCKQKLPF
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
ggcgggctgttacggaagcaagacttcgctgtgtgtcctgacagaatacaggcctgtggg
cgagtggcagagttcggtggccaccatgagctgccgcggcacgtggctgtgggcatacct
cgctggctgccgtacggatgctcagacacaccgggcacctgcgggcgccaggctccacga
gtgctgagtgtgggcaggcaggacgggcagcgaggaagcgcctctaatcgtgtggtacag
gtggcggagttaaatggctacgaagagctctcggctgcggggagagctcgggacgacggg
ggcctggagacagcactatgggtttcccgtgcattcccgtgttcctggaagtggacgttt
tgtgtggcatgctgcatgttaaatacggatgacgacctcccagacgagagactgaaagtg
ctggcctgcctgaacaaactgcaacagcagtacatggacgtaatgaaggtttttaacgat
ccaattcatggtcacattgaaatacacccccttcttgttcgcatcatcgacacacctcag
ttccagcgcctcagatacatcaagcagctgggtggcacttacatggtttttccgggagcc
tctcacaaccgctttgaacactctataggggtgggctacctagcaggatgtctggttcgt
gaactgaaggagagacaaccagaactggatataacccagcgagatatcctctgcgtagaa
attgctgggctttgtcatgatttgggtcatggaccattttcgcacatgtttgatggaaga
tttattccactcactcgtccaggtttgaagtggaagcatgaaactgcttctgttgaaatg
tttgagtacctggtcacttccaataaactagaagaagtcatgaagtcgtatggtcttgtc
ctggaagaagatatgatcttcatcaaggagcaaataggagggcctatagatgaaaccgct
tgcgagaaatcgtggccctaccgtggtcgacaaaaggagaaaagtttcctatacgagata
gtagctaacaaaaaaaatggcattgacgttgacaaatgggattattttgcaagggattgc
catcacctaggaatccagaataattttgatcataagcgattacttaaattcactcgggtc
tgtgaagtgggaaaccagaagcatatctgtacccgcgacaaggaagttggaaatctgtat
gagatgttccacacgcggaattgcctgcaccgacgagcataccagcataagattggcaac
atcattgaaataatgatcacggaagcctttcaaaaagcagacagattttttaaaatagaa
ggctctggaggaaagctgtaccagatttctacagcaatggaggacatggaagcctacact
aagctaactgataatatctacctggaaattctgcactcgagttctccagaactgaaggag
gcacgagaaattttgcgtaaaatagaacgacgtgaattatacaagtttttaggagagact
caacctgaaacagtgaggaaaattgtaaagaatgagagcctggcagcaagcattgctaac
tccaaaccagaaaaggatcctccagatgtggagctaaaggctgaagatttcataatcgat
gttatcaatatggattatggaatgaaagaacagaatcccattgataatgttctcttctat
tgcaaggctgatccttccaaggcagtcaggatcgctaaagaacaggtttcaaagttttta
cccatgacgtttgcagagcaggttatccgggcttattgcagaagtcagaacacagatact
gtttcagctgcaaaacagtattttattcagtggtgtatagagaatgatttcaccaaacca
caggatagtgatgtggttgcccctcatctaactccaatgaagagaagctggaataacatg
agaggtggtgaacacaggacagattcagaacccagctgcaaacaaaagcttcctttctga
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