Pelecanus crispus (Dalmatian pelican): 104034172
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Entry
104034172 CDS
T08340
Symbol
KATNB1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
pcri
Pelecanus crispus (Dalmatian pelican)
Brite
KEGG Orthology (KO) [BR:
pcri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pcri04812
]
104034172 (KATNB1)
Cytoskeleton proteins [BR:
pcri04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
104034172 (KATNB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Katanin_con80
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_Gbeta
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_WDR41
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_VPS8
Beta-prop_HPS5
eIF2A
Beta-prop_RIG_1st
RMC1_N
Beta-prop_WDR19_1st
PROPPIN
WDR54
VPS8_N
Beta-prop_LRRK2
Beta-prop_IP5PC_F
Beta-prop_ACSF4
Beta-prop_pof12
WD_LRWD1
Tricorn_2nd
Beta-prop_WDR11_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
104034172
NCBI-ProteinID:
XP_009485363
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MAVAFTTKTAWKLQDITAHSSNVSSLVLGKSSGRLLATGGDDCRVNIWSVNKPNCIMSLT
GHTTPIESLQINTNEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPFGSFV
ASGSLDTNIKLWDVRRKGCVFRYKGHTEAVRCLRFSPDGKWLASAADDHTVKLWDLAAGK
IMFEFTGHTGPVNVVEFHPNEYLLASGSSDRTVRFWDLEKFQVVSCIEEEATPVRCVLFN
PDGCCLYSGFQDLLHVYGWEPERCFDVVSVNWGKVADLSICNNQLIGVSFAQSTVSSFVV
DLSRVTKSCSIPHGLIRDDEPLVLPAPTGSSLRRIYDRPSTSCSKPQSRVKHSSESERRS
PSSEDDRDEKESKAEIQNPEDYNEIFQPKNAICRTPPQNNEPFPAPPEDEPVTAKEAVKS
SQAANVQTPLPKQELPDPVQRPPIASSTPLTRTEPSVIPAARNEPIGLKASDFLPAVKNQ
SQTELVDEEAMSQIRKGHETMCVVLTSRHKNLDTVRAVWSSGDIKNSVDSAVAINDLSVV
VDLLNIVNQKASLWKLDLCTIVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDIL
AAPPSVGVDITREERLHKCKLCYKQLKNISNVVKNKSGLSGRHGSAFRELHLLMAVLE
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggccgtggccttcaccactaagacggcgtggaagctgcaagacatcacagctcacagc
agcaatgtatcctcgctagtcctggggaaaagttcaggccggctgctggcaactggagga
gatgactgtcgggtcaacatatggtcagttaacaagcccaactgcatcatgagcttgaca
ggccatacaacacccattgagagcctgcagatcaatacgaatgaggaactcattgttgca
gggtcccagtcagggtccattcgagtttgggacctggaagctgccaaaattcttcgtacc
ttacttggtcacaaagcgaatatctgcagtcttgatttccatccttttggaagctttgtg
gcatctggctctttggacacaaacattaagctctgggatgtaagaagaaaaggctgtgtc
ttcaggtacaagggtcacacagaagcagttcgatgtctccgctttagtcctgatgggaaa
tggttagcctctgctgctgatgatcacactgtaaagctgtgggatctggctgctgggaag
ataatgtttgagtttacaggacatactggcccagtaaacgttgttgaattccatcccaat
gaataccttttggcttctggcagctctgacaggactgttcggttctgggacttggagaaa
tttcaggttgtgagctgtattgaagaggaggctactcctgtcaggtgtgtgctcttcaac
ccagatggctgctgcttgtatagtggcttccaggatttgctgcatgtgtacggctgggag
ccagagcgctgttttgatgtggtctcagtgaactggggaaaagtagctgacttatctatc
tgcaacaatcagctgataggagtttcctttgcgcaaagcacggtctcttcctttgttgtg
gatctcagcagagtcacaaagtcgtgttccattcctcatgggctgatcagggacgatgag
cctcttgtgctgcctgcccccacggggtcctcccttcgccgcatctatgacaggccctca
actagctgcagcaagccacaaagcagagtgaaacacagttcagagagtgagaggcgcagt
cccagcagtgaggatgaccgggatgagaaggaatcaaaggctgagatccagaacccagag
gattacaatgagatcttccagcccaagaatgctatctgtcgaactcctcctcaaaacaat
gagccctttccagcccctcctgaggatgagcccgtaactgcaaaggaagcagtgaagtcc
agccaagctgcaaatgtccagaccccgttgccaaagcaagaacttcctgatccagttcag
aggccacctattgcctcctcaactcctttgaccagaacagagccgtcagtgattcctgca
gccaggaatgagcccattggcctgaaggcctctgactttctaccagctgtgaaaaaccaa
agccagactgagctcgtggatgaggaagccatgtcccagatcaggaaaggccacgagacc
atgtgtgtggtactcaccagccgccacaagaatctggacaccgtgcgggctgtatggagc
tccggtgacatcaagaactccgtggactctgcagtggcgatcaacgatctgtctgttgtc
gtggacctcttgaacattgtcaaccaaaaagcgtctctctggaagctggatttgtgtact
atagtcctgccacagatagagaaactactccaaagtaaatatgaaagttacgtgcagact
ggctgcacctccctgaaactcattctccagagattcctgccactgattacagacatcctt
gctgcaccaccttctgttggagtggacatcaccagagaggaaaggcttcataaatgcaag
ctgtgctacaagcagctgaaaaacatcagcaacgttgtcaagaacaagtctgggctcagt
ggccgccatggtagtgcctttcgggaactgcatctcctcatggctgtcctggagtga
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