Pelecanus crispus (Dalmatian pelican): 104034183
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Entry
104034183 CDS
T08340
Symbol
SCAF8
Name
(RefSeq) protein SCAF8
KO
K13191
RNA-binding protein 16
Organism
pcri
Pelecanus crispus (Dalmatian pelican)
Brite
KEGG Orthology (KO) [BR:
pcri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcri03021
]
104034183 (SCAF8)
03041 Spliceosome [BR:
pcri03041
]
104034183 (SCAF8)
Transcription machinery [BR:
pcri03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104034183 (SCAF8)
Spliceosome [BR:
pcri03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
104034183 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
104034183
NCBI-ProteinID:
XP_009485383
LinkDB
All DBs
Position
Unknown
AA seq
1195 aa
AA seq
DB search
MEEVYTFSKSDLYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYK
VPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQK
NNVFKSEIIQPLLDMAGGIPPPVVTPVLPSTTAAMSNNTPGTPVTPVTPANVVQSLPDPW
VSQIANTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQPSLLQALDAGLVVQLQALTA
QLTAAAAAANTLNPLEQSVSFNKKLMDRFDFGEESEQNEEPKKETPTSQLPLVAESVNNS
LFHQLAEQLQQQNLEHLRQQLLEQQQPQKASPEETQEGNFGSEHSASPSQGSSQQQFLEV
ETNVDDSMDIQQQDMDIDEGQDVAEEEIFEQEEKKSAVRSRSRTRSRSRSRSPRKRRSRS
RSGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTT
LWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAYRALQKLSSGSYK
IGSKIIKIAWALNKGVKTEYKQFWDVDLGVSYIPWEKVKLDDLEGFAEGGMIDQETVNTE
WETARSSEAAKENIPTTQSAAVDKSTVITTQTEAYTQPVTMLQIPVAPAVPAVSLVPPAF
PVTMSVPPPGYSAIPPPPFLRASFNPSQPPPGYMPPPVPPVVPPPVVPPPVVPPVVPTSL
VQPPLPIAQETMKDVPFTSLVLPVGTVTSNLATPTLSAGSVFNPLPISKPESDEKGSHLT
DLQISSSENNRSVQLPTVSSSSSLAGGVQPTSVSSSSGLMAGVQPPNVSSSSGLLAGVHP
PTVSSSPGLLTGMQPPNVSSSSGVLAGVQPPSVSNNSGLLIMPPPNVSSSSGLMGVPPPN
ISSSSGLLAMQHPAGVQNMPHLNISGQRMPGMEGDRDYRFPPVENRDNLNRPSPVDVRDS
VGRPPVDPREGMGRPPVDGREHFARPHVDMRENFGRPGIDNLGRREHFGFNSDKHWGQRG
DYDEREHHAFPIYGGPKGFHEDRERFRHVNYRFDSRSGPNWNRGFEQDAHRDFDDRRRPW
ERQRDRDDRDFNFCREINGNRFGRDRMSNNWIPPPHPRVFEYFDGATSQRKADNMPQVNG
ENTETESQPPTAQVQDDPELYEKLTSSVEINKEKSDTEADIESEPVVESTETEGT
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagtctatactttttccaaatctgatttgtactcgctaaatgattataagcca
cccatttctaaagctaaaatgacacagatcaccaaggcagcaatcaaggctataaagttc
tacaagcacgttgtacagagtgttgagaaattcattcaaaagtgcaaaccagaatataag
gtacctggtctgtatgtcattgactccattgtaagacagtcccggcatcagtttgggcaa
gaaaaggatgtatttgctccaagattcagcaataacatcatcagcactttccagaacttg
taccgttgtcctggggatgataagagtaaaattgttcgagtgctaaatttatggcagaag
aacaatgtgttcaagagtgaaattattcagcctctcttggatatggcaggaggaattcct
cctccagttgtgacccctgtcttgcccagcactacagctgctatgagcaacaatacacca
ggaacacctgtgactccagttactccagccaatgtggtgcagagtttacctgatccttgg
gtatcccagattgctaatacagatacccttgctgctgttgcacagattttacagagtcct
caaggccaacagcttcagcagttgatacagacgctgcagatacagcagcagaaacctcag
ccttcgctacttcaagccctggatgctggtcttgttgttcagttacaggccctcacagcc
caacttacagctgcagctgctgctgctaacacacttaatccactggaacagagtgtctct
tttaataagaagctgatggacaggtttgactttggggaagaatctgaacaaaatgaagaa
cctaaaaaggaaactcccacttcccaactgcctttagtagcagaatctgtgaacaactca
ctttttcaccaactagctgaacagctacagcaacaaaatctagaacatctcagacaacag
cttctggagcaacagcagcctcaaaaggcaagccctgaggagactcaagaaggaaatttt
ggttcagagcactctgcctcaccatcacaagggagtagtcagcagcagtttttagaagtg
gaaacaaatgtagatgattcaatggatattcaacaacaggacatggatatagatgaagga
caggatgttgctgaagaggagatttttgaacaagaagaaaagaaatcagctgttcgttca
agatcaagaacccgttcaagatctcgttcaaggtcaccaagaaaacgaaggtctagatca
cggtctggttctcgtaagcgtaagcacagaaaacgttcacgctcaagatcaagagaaagg
aagagaaagtcatctcggtcatattccagtgaaagaagggctagggaaagggaaaaagaa
cgtcagaaaaagggattgcctcctatacggtcaaaaacactaagtgtttgcagtactact
ctttgggtaggtcaagtagacaagaaggctacacagcaagatttaactaacttgtttgaa
gaatttggacaaatagagtctattaatatgattcccccaagaggttgtgcttatgtatgt
atggttcatagacaagatgcatatcgtgcacttcagaaacttagttctgggtcctataaa
attgggtctaaaattattaagattgcttgggctttgaataaaggtgtgaaaacggaatac
aagcaattctgggatgtggatctgggagtttcatatattccttgggagaaagtaaaattg
gatgatttggagggctttgctgaaggtggcatgattgaccaggagacagtaaatacagaa
tgggaaacagccagaagctcagaagctgctaaagaaaatattccaactacgcagagtgct
gcagttgataagagtacagttattacaacgcagacagaagcttacacgcagccagtcacc
atgctgcagattccagtagctccagctgtgcctgctgttagcttggttccacctgcgttt
cctgtcacaatgtctgtccctcctcctggttatagcgcaattcctcctccacccttcttg
cgagcgagtttcaacccttcacagccacctccaggttatatgcctcccccagttccacct
gtcgtcccaccacctgtcgtcccgccacctgttgtcccaccagttgtcccaacatcttta
gtgcaacctccattaccaattgcacaagagacgatgaaggatgttccttttactagtctt
gttctaccagttggcacagttactagcaatctagctactccaacgttatctgctggaagc
gtttttaatcctctgccaatcagcaaaccagaatcagatgaaaagggatcacatcttaca
gaccttcagatttcttccagtgaaaacaatagatctgtgcagctacctactgtctccagt
agctcttctcttgctggcggagttcagccaaccagcgtctcaagtagctctggacttatg
gctggagtgcaaccaccaaacgtctccagtagctcagggcttctagctggagtgcatcca
cccactgtctcaagcagccctggccttctgacaggaatgcagccacccaatgtctcaagc
agctcaggagttctggcaggagtacagccaccaagtgtctcaaacaactctgggcttctc
ataatgccaccacccaatgtttcaagtagttctggacttatgggagtgccaccaccaaat
atttcaagtagttcgggacttctggcaatgcagcatccagctggggttcaaaatatgcct
catttaaatattagtggtcaaaggatgccaggaatggaaggagacagagattatcgcttt
cctccagtagaaaaccgagataatcttaacagaccatctccagtggatgtcagagattct
gttggacgaccaccggttgatcccagagagggcatgggaaggcctccagtagatggaaga
gaacactttgcaagaccacatgtagacatgagagaaaattttggaagaccaggtatagat
aaccttggtcgacgagagcattttggtttcaattcagacaagcactggggacagagagga
gattatgatgaaagagagcaccatgccttccctatttatggtggccctaaaggcttccat
gaagacagagagaggtttcggcatgtaaactataggtttgacagtagaagtggtcccaat
tggaatagaggatttgaacaagatgctcacagagattttgatgaccgcagaagaccctgg
gaaagacagagggatagggatgacagagattttaatttttgcagagaaattaatgggaac
aggtttggaagagacagaatgtcaaacaactggatcccccctccacatccacgggtgttt
gaatattttgatggggccacttcccagcgcaaagccgataatatgccccaggtaaatggt
gaaaatacagagacagaaagtcagccaccaactgcacaggtgcaggacgatccagaactt
tatgaaaaactgacatcttccgtcgagataaacaaagagaagagtgacacagaagctgat
atagaaagtgaaccagtggtagaaagcacagaaactgaggggacataa
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integrated database retrieval system
