Pelecanus crispus (Dalmatian pelican): 104034331
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Entry
104034331 CDS
T08340
Symbol
CTR9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
pcri
Pelecanus crispus (Dalmatian pelican)
Brite
KEGG Orthology (KO) [BR:
pcri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcri03021
]
104034331 (CTR9)
Transcription machinery [BR:
pcri03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
104034331 (CTR9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_7
TPR_6
ARM_TT21_5th
TPR_Slam
TPR_9
ARM_TT21_4th
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
104034331
NCBI-ProteinID:
XP_009485567
LinkDB
All DBs
Position
Unknown
AA seq
1211 aa
AA seq
DB search
MRAAGRALVASSRSFVPGSRGTVALFLEWNELLRLQVYRFAEKNPNLPSPVPLGERCLLA
VIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDFVKLLEAARIDGNLDY
RDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKELITQATLLYTMADKIIMYDQNHLLGRA
CFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYRGALAYYKKALRTNPG
CPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAVLELNNKEADSIKNGV
QLLSRAYTIDPSNPMVLNHLANHFFFKKDYGKVQHLALHAFHNTEVEAMQAESCYQLARS
FHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENASQCFEKVLKAYPNNY
ETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQILEQTDIQGALSAYG
TATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDRAKAEAEHDEHYYNAI
SVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFK
EALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQNDTYSMLALGNVWLQTL
HQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHKGYFREARDVFAQVRE
ATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVLLYLARALFKCGKLQE
CKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSY
LSKVGDKMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQK
LLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGEVEGSKEKKRGGGGRRSKKGAG
EFDEFVNDDSDEDLPMSRKKKKRKGSGSEQDGEEEEGERKKKKRRRPQKADEGSDDEEHE
NGPRPKKRRPPKAEKKKAPKPERLPPSMKGKIKSKAIISSSDDSSDEDKLKIADDGXXXX
XNSDSDDGEQQHSKRIVSDSDSDNRNKSGSEAGSPRRSSVHPSEEDSDSDRSARKRRRSD
SEQSDNESVQSGRSRSGGSENESRPASRSADSDRDSERGSDNEGSGRGSGNESEPEGSND
EGSEGGSDDSD
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgccgcggggcgggcgcttgtagcttcctctcgtagttttgtcccgggctcgagg
gggactgtcgctctcttccttgagtggaatgagttgctgcggttacaggtgtatcgcttt
gcggaaaaaaacccaaacctgccttcgccggtgcccctcggtgaacggtgtttgctagct
gttattgagcttgacttcgatcagttacctgagggtgatgaagttataagtatattgaaa
caggaacacactcaactgcacatatggattgccttggcgttggaatactacaaacaagga
aaaacggaagactttgtgaagctgttggaagctgcacgcatagatggtaacttggactac
agagaccatgaaaaagatcagatgacatgtttggatactctggcagcatactatgtacag
caggctcgaaaggaaaagaacaaagataataagaaggagctcattacgcaagctaccttg
ttgtatactatggctgacaaaattatcatgtatgatcagaatcacttgttgggaagagcc
tgcttttgtctgcttgaaggtgataagatggaccaagctgatgcacaattccattttgtg
ctcaaccagtctccaaataatattcctgcccttctcggtaaagcatgcatttctttcaac
aagaaagattatagaggagcccttgcctactacaagaaagcattgcgtaccaatccaggt
tgcccagctgaggttcgattaggtatgggccactgctttgtgaaactgaacaagttggaa
aaagctcgcttagcattcagcagggctctggagctaaattcaaaatgtgtaggggctttg
gttggactggctgttctggaactcaataataaagaggctgattccatcaagaatggtgtt
cagctcctctctagggcttacacaattgatcccagtaatccaatggtgttgaatcacttg
gctaatcacttcttcttcaagaaggactatggtaaagtacaacacttggctcttcatgct
ttccataatacagaagttgaagcaatgcaagcagagagttgttatcagctggctaggtct
tttcatgtacaggaagattatgatcaagctttccagtattattaccaggccacccagttt
gcctcatcttcttttgtacttcccttttttggattgggtcaaatgtatatttatcgaggg
gacaaagagaatgcatcacaatgctttgaaaaagttttgaaagcctatcctaacaattat
gagactatgaaaatccttggatccctttatgcagcttcggaagaccaggagaagcgggat
attgcaaagggacatctaaagaaagtcacggaacaatatcctgatgatgtagaggcatgg
attgagttagcccaaattctagaacagactgatatacagggtgcactgtcagcctatggt
acagccacacgcattctgcaagagaaagtacaggctgatgtcccaccagagattttgaat
aatgtgggtgctctgcacttcaggctgggaaacctaggagaagcgaaaaaatattttttg
gcatcactggatcgtgcaaaagcagaagctgaacatgatgagcattattacaatgctatc
tctgtaacaacgtcctataaccttgccagactatatgaggcgatgtgtgaatttcatgaa
gcggaaaagctgtataaaaacattttaagagaacatcctaattacgttgattgctacttg
cgcttgggagctatggctagggataaaggaaatttttatgaggcttctgattggtttaaa
gaagcacttcagataaatcaggaccatccagatgcttggtctctgattggcaatcttcat
ttggctaaacaagagtggggtccaggacagaagaaatttgaaagaatattgaaacagccc
tccacacaaaatgatacttattccatgctggctcttggcaacgtctggctgcagactcta
catcaacccacaagagacagagaaaaggagaagcgtcatcaagaccgtgcattagcaatc
tacaagcaagtactcagaaatgatccaaagaatttgtatgctgctaatggcataggagct
gtcttggcacataaaggatatttccgtgaagctcgtgatgtttttgctcaagtgagagag
gcaacagcagatatcagtgatgtgtggctgaatttggcacatatctacgtagaacagaaa
caatacatcagtgctgtgcagatgtatgaaaactgcctcagaaagttctataagcatcaa
aatactgaagtattgttatatttggcccgggcgctcttcaaatgtggcaaattacaggaa
tgcaaacaaactttgttaaaggccaggcatgtagcaccaagtgatacagtccttatgttt
aatgtggctttagtgctacaaagactagctacttctgtcctgaaagatgaaaaaagtaat
ctaaaggaggtgcttaatgctgtgaaagaactggagctagcccacaggtacttcagttac
ttgagtaaagtaggtgataagatgagatttgacttggcacttgctgctacggaagccagg
caatgctctgacttactgagtcaagcccaatatcatgtggctcgggcacgcaagcaggat
gaagaagagagggagctgcgtgcgaagcaagagcaagaaaaggagctgcttcgccaaaaa
ctacttaaagaacaggaagagaagcgcctaagagaaaaagaagaacagaagaaacttctg
gaacaaagagctcaatatgtggagaaaaccaagaatattctgatgttcactggtgaagta
gaaggatcaaaggagaaaaaacgtggcggcggaggcaggcgttccaaaaaaggagcaggg
gaatttgatgagtttgtcaacgatgacagtgatgaagatctgcccatgtctagaaagaaa
aagaagaggaagggcagtggtagtgaacaagatggggaagaggaggagggtgagagaaag
aagaagaagaggaggagaccccagaaggcagatgaggggagtgatgatgaagaacatgaa
aatggtccaagacctaaaaaacggcgtccacccaaagcagagaaaaagaaagctcccaaa
ccagaacgtctgcctccttcaatgaaaggaaagatcaaatcaaaagccataatttcatca
agtgatgattcttctgatgaggataaactcaaaattgctgatgatggnnnnnnnnnnnnn
nncaacagtgattcagatgatggggaacagcagcacagtaaacgcattgtttctgatagt
gattctgataacagaaataaatctggtagtgaggcaggtagtccgaggaggtccagtgtc
cacccgtctgaggaagattctgacagtgacaggtcggctagaaaaaggaggcggtctgat
tcggagcagtcagacaatgagtctgtacagtcggggagaagtcgttccggtggctcagaa
aatgagtctcgcccagcttctcgcagtgctgactcagacagagattctgagagaggatct
gacaacgagggttctggcagaggatctggtaatgaatctgaaccagaaggatccaatgat
gaggggtctgaaggtggttcagatgacagtgactag
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