Pelecanus crispus (Dalmatian pelican): 104035509
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Entry
104035509 CDS
T08340
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pcri
Pelecanus crispus (Dalmatian pelican)
Brite
KEGG Orthology (KO) [BR:
pcri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcri03016
]
104035509 (TRUB1)
Enzymes [BR:
pcri01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
104035509 (TRUB1)
Transfer RNA biogenesis [BR:
pcri03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
104035509 (TRUB1)
Prokaryotic type
104035509 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
DMA
Motif
Other DBs
NCBI-GeneID:
104035509
NCBI-ProteinID:
XP_009487110
LinkDB
All DBs
Position
Unknown
AA seq
271 aa
AA seq
DB search
RPGRARELGGEEPNEVSKRRNNPTHQYRLGADLLESSSAEKDLGVLVDTLTMLQQCALAA
KVANVVGIGKGTKMLGTMLAGSKKYTAIGLLGKATDTLDATGKVTEEKPYDQVTKGDLEN
VLQKFTGDIMQVPPLYSALKKDGERLSTLMKRGEAVEAKPARPVRVYSLSLQQFQPPLFT
LDVECGGGFYVRSLVSDIGKELSTCATMQELTRTKHGPFTLEEHALYEDKWTIDEIARSL
QHCTSLLPAEPSHKKLKTEHPGETAVSCEDK
NT seq
818 nt
NT seq
+upstream
nt +downstream
nt
cgagacctggacgggctagagagctgggcggagaggaacccaatgaagtttcaaaaagga
ggaataaccccacgcaccagtacaggttaggggctgacctgctagaaagcagctctgcag
agaaggacctgggagtcctggtggacacgctaaccatgctccagcagtgtgctcttgcgg
ccaaggtggccaatgtggttggtattggaaaaggaacaaaaatgttgggaactatgttgg
caggttccaagaagtacactgccattggactactgggcaaagctactgacacattagatg
ctacaggaaaagtgactgaagaaaaaccttatgaccaggtaacaaaaggagatcttgaaa
atgtgctgcaaaagttcacaggggacataatgcaggttcctccactctattctgctttga
agaaggatggagaaaggctatccactctgatgaagaggggagaagcagttgaagcaaagc
ctgctcggccagtaagagtgtacagcctctctctccagcagttccagccaccgctgttca
cactggatgttgaatgtggtggtggcttttatgtcaggagcctggtcagtgacattggca
aagaactctctacctgtgccactatgcaggagctgacccgaaccaaacatgggccattta
cgctagaggagcacgccctttatgaagacaaatggacaattgatgaaattgcacgatcct
tacagcattgcacatctcttctcccagcagagccttctcataaaaaattgaagacagagc
atcctggtgaaactgctgtgagctgtgaagataagtga
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