Pelecanus crispus (Dalmatian pelican): 104035973
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Entry
104035973 CDS
T08340
Symbol
COL3A1
Name
(RefSeq) collagen alpha-1(III) chain
KO
K19720
collagen type III alpha
Organism
pcri
Pelecanus crispus (Dalmatian pelican)
Pathway
pcri04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pcri00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104035973 (COL3A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pcri00536
]
104035973 (COL3A1)
Glycosaminoglycan binding proteins [BR:
pcri00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104035973 (COL3A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COLFI
Collagen
Motif
Other DBs
NCBI-GeneID:
104035973
NCBI-ProteinID:
XP_009487700
LinkDB
All DBs
Position
Unknown
AA seq
922 aa
AA seq
DB search
GLPGIPGNPGGDGKPGPPGTQGESGRPGPPGPSGPRGQPGVMGFPGPKGNEGAPGKNGER
GPGGPPGTPGPAGKNGDVGLPGPPGPTGASGERGEPGPPGPPGLQGLPGGPGPAGENGKP
GEAGPKGDIGGPGFPGPKGENGIPGERGAQGPPGPPGARGGPGPAGSEGAKGPAGPPGAP
GGTGLPGLQGMPGERGPSGSPGPKGDKGEPGGKGADGIPGARGERGNVGPIGPPGPAGPP
GDKGETGPAGAPGPMGSRGGPGERGEQGLPGPAGFPGAPGQNGEPGGKGERGPPGLRGEA
GPPGPAGPQGGPGAPGPAGLQGAKGERGSPGGPGAAGFPGARGLPGPPGNTGAPGPAGNA
GPAGKDGPPGPPGSTGPAGSPGPAGTRGEPGPPGERGSPGARGERGAPGEIGPQGIVGGR
GSTGLPGLRGPSGPPGVAGAKGEDGKPGTNGIPGERGAPGPQGPVGQRGLPGEPGRDGNP
GSDGSPGRDGSPGGKGDRGESGSPGSPGPPGHPGPAGTSGAPGKPGERGFQGPPGPAGPA
GPAGARGPAGPQGPRGDKGETGERGSNGIKGHRGFPGTPGLPGPPGPLGPQGAIGSPGAS
GARGPPGPSGPPGKDGKSGYPGPIGPPGPRGNRGDSGPAGPPGQPGLPGPSGPPGPCCGG
VAALGGEKGPVGYGYEYRDEPKENINLDDIISSMKSINNQIENIISPDGSRKNPARNCRD
LKFCHPELKSGEYWIDPNQGCKMDAIKVYCNMETGETCINANPSTVPRKNWWTSESSGKK
HVWFGESMNGGFQFSYGDPELPEDVSEVQLAFLRILSSRASQNITYHCKNSIAYMDQDSG
NVKKALKLMSSMESEIKAEGNSKFTYAVLEDGCTKHTGEWGKTVFEYRTRKTMRLPVVDI
APIDIGGPDQEFGVDIGPVCFL
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
ggtttgcccggaattccaggaaaccctggaggcgatgggaaacctggccctccaggtact
cagggtgaatctggccgtcctggtccacctggcccttcaggcccacgtggtcaaccaggt
gtaatgggcttccctggtcctaagggcaatgagggtgcaccaggtaagaatggagaaaga
ggccctggtggaccgcctggaacacctggtcctgctgggaagaatggtgatgttggcctc
ccaggtcctcctggacctactggtgcttctggggagagaggagaaccaggaccaccaggt
ccacccggcctccagggattgcctggtggaccaggaccagctggagagaatggaaagcct
ggagaagcagggccaaaaggtgatattggaggacccggattcccaggccctaagggtgaa
aatggtatcccaggtgaacgtggtgcacagggtcctccaggacctcctggagcaagaggt
gggccaggtcctgctggctcagaaggtgccaagggtcctgctggcccccctggtgctcct
ggaggcacagggctgcctggcttacagggaatgccaggagaaagaggaccttctggaagt
cctggaccaaaaggggataagggagaacctggtggcaaaggtgctgatggcattcctggt
gcaagaggagagagaggtaacgtaggtcccatcggtcctcctggtcctgccggcccacct
ggagataagggagagactggtccagcaggtgccccaggtccaatgggttcccgtggtggt
cctggtgaacgaggagaacaaggtcttcctggacctgctggcttccctggagctccaggc
caaaatggggaacctggtggaaaaggagaaagaggcccacctggtctaagaggagaggct
ggaccccctggacctgcaggtccacaaggtggtcctggtgcaccaggtccagctggtctc
caaggagcaaaaggagaacgtggatctcctggaggccctggtgctgctggtttccctggt
gctcgtggtctacctggtccccctggtaacactggtgctccaggtcctgctggtaacgca
gggcccgcaggcaaggatgggcctcctggacccccgggtagcactggtcctgctggcagt
ccaggacctgccggaacaagaggtgagcctggcccaccaggcgaaagagggtcaccaggt
gcacgaggagaaagaggggcaccaggagaaataggtcctcaaggcatcgttggtggtcgg
ggtagcacaggtttgccaggtctgcgtggcccaagcggtccacccggtgtggcaggtgcc
aagggtgaagatggtaaaccaggcaccaatggtatcccaggagaacgcggtgctcctggt
ccacaaggtcctgttggacaaagaggcttacctggagagcctggcagagatggtaaccct
ggctcagatggctcacctggacgtgatggatccccaggaggcaaaggtgaccgcggtgaa
agtggctctcctggctctccaggacctcctggtcaccctggacctgcaggtaccagcggt
gcacctggaaaacccggtgaaagaggatttcagggtccacctggccctgctggccctgct
ggtcctgctggtgctcgaggtcctgctggccctcaaggtcctcgtggtgataaaggtgaa
actggtgaaagaggcagcaacggcataaagggtcatagaggattccctggtacccctggt
ctccctggtcctcctggtcccctgggtccacaaggtgcaattggaagtccaggagcttca
ggtgcaaggggtcccccaggaccatctggaccacctggaaaagatggtaaaagtggctat
ccaggtccaattggtcctcctggccctcgtggtaacagaggtgatagcggccctgcaggt
ccaccgggccagcctggtctgcctggtccttctggtcctcctggtccatgctgtggtggt
gtggctgccctgggtggtgaaaaaggtccagtgggctatggatatgaatatcgagatgag
ccaaaagaaaatatcaatctggatgacatcatatcttcaatgaaatcgattaataaccag
attgagaacatcattagtcctgatgggtcacggaagaatccagctcgtaactgcagagat
ctgaaattctgccatcctgagctcaagagtggggagtactggattgatcctaaccaaggc
tgcaagatggatgctattaaagtatactgtaatatggaaactggtgagacatgcatcaat
gctaaccccagcactgtgccaaggaaaaactggtggaccagcgaaagcagtggaaagaaa
catgtttggtttggagaatctatgaatggaggcttccagttcagctatggagatcctgag
cttccagaggatgtctcagaagttcagctggccttcctccgcatcctctccagccgcgcc
tcccagaacatcacctaccactgcaagaacagcattgcctacatggatcaagacagcgga
aatgttaaaaaagctctgaaactgatgagctctatggaaagtgagatcaaggctgaagga
aacagcaaattcacatatgctgttctggaagatggctgtactaaacacactggcgaatgg
ggtaaaacagtctttgaatacagaacgcgcaagacaatgaggttgcctgtggttgatatt
gcacccatagatatcggtggtcctgatcaggaatttggtgtggacattggcccggtctgc
ttcttataa
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