Pelecanus crispus (Dalmatian pelican): 104036013
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Entry
104036013 CDS
T08340
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
pcri
Pelecanus crispus (Dalmatian pelican)
Brite
KEGG Orthology (KO) [BR:
pcri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcri03000
]
104036013 (CTCF)
03036 Chromosome and associated proteins [BR:
pcri03036
]
104036013 (CTCF)
Transcription factors [BR:
pcri03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
104036013 (CTCF)
Chromosome and associated proteins [BR:
pcri03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104036013 (CTCF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
zf-C2H2_7th_ZNF462
zf-C2H2_ZN142
Zf-C2H2_ZNF451_C
zf-met
zf-C2HE
Zf-C2H2_ZNF451
zf-C2H2_6
zf-C2H2_15
Endonuc-like_C
zf-C2H2_CASZ1
zf-WIZ
DUF8106
HMBD
Zn_ribbon_DUF2089
DUF7410
Motif
Other DBs
NCBI-GeneID:
104036013
NCBI-ProteinID:
XP_009487757
UniProt:
A0A091T0J8
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
MEGEAVEAIVEESETFIKGKERKTYQRRREGGQEDDACHIPPNQADGGEVVQDVNSGVQM
VMMEQLDPTLLQMKTEVMEGAVSQETEATVDDTQIITLQVVNMEEQPINLGELQLVQVPV
PVTVPVATTSVEELQGAYENEVSKGGLQEGEPMICHTLPLPEGFQVVKVGANGEVETLEQ
GELQPQEDPNWQKDPDYQPPAKKTKKNKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEV
NAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCG
RAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYAS
VEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSG
TMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERY
ALIQHQKSHKNEKRFKCDQCDYACRQERHMVMHKRTHTGEKPYACSHCDKTFRQKQLLDM
HFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCSGLDGGEGENGGETKKGKRGRKR
KMRSKKEDSSDSEENAEPDLDDNEDEEETAVEIEAEPEVEQEAPAPPPSKKRRGRPPGKA
ATQPKQSQPAAIIQVEDQNTGEIENIIVEVKKEPDAETVEEEEEAQPAVVEAPNGDLTPE
MILSMMDR
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgaggcagtcgaagctattgtggaggaatcggaaacttttattaaggggaaa
gagagaaaaacctatcaaagacgccgtgaaggtgggcaggaggatgatgcttgtcatata
ccaccaaaccaagcagatggaggtgaagtagtgcaggatgtcaacagtggtgtgcagatg
gtgatgatggaacagctggatccaactcttcttcaaatgaagactgaagtaatggaaggt
gcagtgtctcaagaaacggaggccacggtggatgacacgcagatcataacacttcaggtt
gttaatatggaagaacagcctataaaccttggtgagcttcagctggtccaagtacctgta
ccagtgactgtacctgttgccaccacgtctgtggaagaacttcagggagcttatgaaaat
gaggtttccaaaggagggctgcaagagggagagcccatgatctgtcacaccctaccttta
ccagaaggcttccaagtggtgaaagtgggtgcaaatggtgaggtggagacgctggaacaa
ggtgaacttcagccacaggaagatcccaattggcaaaaagacccagactatcagcctcca
gccaaaaaaacaaagaaaaacaaaaagagtaagcttcgctacactgaggaaggcaaagat
gtggatgtctctgtgtatgactttgaggaggagcagcaggagggtttgttgtctgaggtc
aatgcagaaaaggtggtgggcaatatgaagccacctaaaccaacaaaaattaaaaagaaa
ggtgtaaagaagacattccagtgcgaactgtgcagttacacttgtccgcgtcgttccaac
ttggaccgccacatgaaaagccacactgatgaaagaccacataagtgccatctctgtggc
agggcttttcgaacagtcacattgctgaggaaccacctcaacactcacacaggtactcgc
cctcacaagtgcccagactgcgacatggcctttgtgaccagtggagagttggttcggcat
cgccgctacaagcacacccatgagaaaccattcaaatgttcaatgtgtgattatgctagt
gtggaggttagcaaattgaaacgccacattcgttctcacactggagagcgtccgttccag
tgcagcttgtgcagctatgccagcagggatacctacaaactgaagaggcacatgaggacc
cactctggagagaagccatatgaatgttacatctgccatgctcgcttcactcagagtggt
accatgaagatgcacattttgcagaagcacacggagaatgtggccaaatttcactgtcct
cactgtgatactgttatagcaagaaagagtgacttgggtgtccatttgcgaaagcagcat
tcctacatcgaacagggcaagaagtgtcgttattgtgatgctgtgtttcatgagcggtat
gccctcatacagcatcagaagtctcacaagaatgagaagcgcttcaagtgtgaccagtgc
gattatgcatgcagacaggagcggcacatggtcatgcataaacggactcatactggagaa
aagccttatgcctgtagccattgtgataaaaccttccgtcagaaacagcttcttgatatg
cacttcaaacgatatcatgatcccaactttgtccctgctgcttttgtttgttccaagtgt
ggcaaaacattcactcgcaggaacacaatggccagacatgctgataactgttctggccta
gatggtggggaaggagagaatggaggagagacaaagaagggcaaacgtggccgaaagaga
aagatgcggtctaagaaagaagattcctctgatagtgaggaaaatgctgaaccagatttg
gatgataatgaagatgaggaggagacagcagtagaaattgaggctgaaccagaagtggag
caagaggctcctgcaccacctcccagtaagaaacgaagaggaagaccaccaggcaaagct
gccacccaaccaaaacaatcccagcctgccgcaatcattcaggttgaagaccagaacact
ggtgaaattgaaaatattatagttgaagtaaagaaagaacctgatgcagaaacagtagag
gaagaggaggaagctcagcctgcagtagtggaagctcccaatggagacctcactcctgag
atgattctcagcatgatggaccggtga
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integrated database retrieval system
