Pelecanus crispus (Dalmatian pelican): 104036320
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Entry
104036320 CDS
T08340
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2
KO
K10897
partner and localizer of BRCA2
Organism
pcri
Pelecanus crispus (Dalmatian pelican)
Pathway
pcri03440
Homologous recombination
pcri03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104036320 (PALB2)
03460 Fanconi anemia pathway
104036320 (PALB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcri03400
]
104036320 (PALB2)
DNA repair and recombination proteins [BR:
pcri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
104036320 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
104036320 (PALB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
104036320
NCBI-ProteinID:
XP_009488161
LinkDB
All DBs
Position
Unknown
AA seq
1253 aa
AA seq
DB search
SRDHISPSADKCETSQLQTKTCSGLDTEKKTFATFKHVPEFSDNEVSLQDSSPAESIQAS
QQNLRCGIVRPAPEEKKTQTSRNLMKLRRRTKPLVLEERESVRDVHLMNADETVKTQIAG
TEELWSPVLRRSSLSNTEENAQRASRPALVQRGENSFAPSDAALGVVQDTLEASVPPGVP
ELFPCALRDSSDVWQPASPSAVAAADNHEPARPCSENGDSVLLDTSGDGGKESSSIIKQM
DSESMREDQGELDRLSDLMSENEVLPADGNDTVTNENKSHEGNQSDANSVNPFPTDLALG
NAEELLENQQLEIQSRLSHPEKVTAPENALNSCTVVEGLLFPVEYYVRTTRRMSNCQRKV
DLDAVILSQLGRSKKGQRSKCQQKDANSDRPSQERGENDLESGVVQLPFLGAENDPANSS
SPQKSLPASSGSSTSLGSISQNSITSTKRDQTKRDQRRPQGKQKGRRKSTCKPPVHPVSQ
ELTGSLDLVMTRESSSPLSHECQSEKENCGADLEKSSSDERRLSAAAALGSGETEVTGTV
QPRSADPPPAGSQVLGKCRKTLLEQVQNPLQNSDSLSPGNETFASHMGDPEANLTVCQAD
KRPAERVNQHVQGACRAEQLLAIDNPPCRSLRSSARQRASQVSKDESKRGRSYPAGSEGP
ASLGLPTMDPDTCNSLFSFRSLQWLALRLGIRDFHLPDEEFGLLKLEKLESSPVNDLEVF
VPSVFGDGVASEDTQDAQMNPEEKSFKSNLISPFKNGLPKSPHLESPASKQELSTHELLF
TPMGTVLAAAPTQPESQISSSVFPVVGATPAVVPSVRSEVFPNTPSVPPSQASLHSCGGA
SAQVVDDGECKDSAIPLHLGSCGAESAGKEEEQGTTFLLEVERGPDNKSDEAVACEKHQQ
SENKEQRSCRASPEQKKGVAERLTPVLLDGLREESLQLVSKLKDCSSSCAVDVSTMWWEA
AGSRELCVVTACESSVSLWKPLASDHWGKVYTWQLGEIPVIQIVPLPDTCNLVCIALGDL
EIGEIRLWLYSSENESFKQSLVKTGNIKAVLGLKDRRLVSSSRTAQEQQVEIVSLSETGR
SKDGQTLMPPEETVLAFAEVEGMRDALVGTTAVNSIVVWNLKTGQLLKKMHVGYSYPASI
CHRAYSDSGLLFVVLSHPHAKESESCGNPAFRVVAFNPKTARSTGVMFSSLPPGHTGRYL
EGDVKDASAAAVLTSGAIAVWDLLLGQCMALLPPGPEGSWALARWATTGACLL
NT seq
3761 nt
NT seq
+upstream
nt +downstream
nt
gttctagagatcacatatcccctagtgctgacaaatgtgaaacctctcagttacagacta
aaacctgctctggtcttgacacagagaagaaaacatttgccacatttaaacacgttcccg
aattctccgataatgaggttagcttgcaggacagctcaccggcagaaagcatacaggcta
gccagcaaaacctccgctgtggaattgtcaggcctgcccctgaggagaaaaaaacccaaa
cctccagaaacctgatgaagctgaggagacggacgaagcctctggtattggaggaaaggg
aatcggtgcgtgatgtacatctaatgaacgctgatgaaacggtaaaaactcaaattgccg
gtacagaggaactttggtcaccagtcttgaggcgaagcagtctctcaaacactgaggaaa
acgctcaaagagcatcccgaccagcgcttgtgcagagaggagaaaacagttttgctcctt
ccgatgcagcgctaggagttgtacaagacacgcttgaagccagcgtccctccaggagtgc
ctgagctgttcccgtgcgcgctgagggacagcagcgacgtctggcagccggcgtccccaa
gtgctgtggccgcagctgataaccatgagcctgcacggccgtgttcagagaatggtgact
ctgttttacttgacaccagtggtgatgggggaaaagaatcctccagtataataaaacaaa
tggacagtgagagtatgcgtgaagatcagggagaattagacaggctctcggatttaatgt
cagaaaacgaagtattgcctgctgacggaaacgacactgtaactaatgagaacaaaagcc
atgaaggaaatcaaagtgacgctaatagcgtaaatccttttcctacagatcttgctctgg
gcaacgcagaagaactgttggagaatcaacagcttgaaattcagtcaagactttctcatc
cagaaaaggtgacagctcctgaaaatgcactgaactcttgcacggtggttgaagggcttc
tctttccggttgaatactatgtcaggacaactcgacgcatgtctaattgccagaggaaag
tggacctcgatgctgtaattctcagccagctgggcagaagcaagaaaggtcagcgaagta
agtgtcagcagaaagatgcaaattcagaccggccctcccaagaaagaggtgaaaatgatt
tagagtcaggggtcgtgcagttaccttttcttggtgcagaaaatgatccagcaaattcaa
gtagtcctcagaaatctcttcctgcgtccagtggtagcagcacttcacttggatcaattt
ctcaaaacagtatcactagcacaaagcgagatcagacaaagcgagatcagagacgaccac
aggggaaacaaaaaggaagaagaaagtctacctgcaaaccgcctgtgcatccagtgtcac
aggaacttacagggagtttggatctcgtaatgacgagggaaagcagtagtccactgtcac
atgagtgtcagagtgaaaaggaaaactgtggggctgatcttgagaaatcatcttcggatg
agagaaggttgtctgctgctgcagctcttgggtctggagagacagaagtgactggcaccg
tacagccgaggagtgctgatcctcctcctgcaggaagccaagtgcttggcaagtgccgca
agactctcttagaacaggttcaaaatccacttcagaacagcgattctctgagcccaggga
atgaaacttttgccagccatatgggagatccagaagccaacttaactgtgtgtcaggctg
ataaacgtccagcagagcgtgtgaaccagcacgtgcaaggagcctgcagggctgagcagc
tcctagcgattgacaaccctccgtgccgctccctgcgttcctctgcgagacagagagcca
gtcaagtctcaaaagatgagagcaaaagaggacgtagctacccagcgggttcagagggtc
ctgcttctcttggcctccctactatggaccccgatacttgcaactctctcttctcctttc
gcagtctccagtggctggccctcagactgggtatcagagactttcacttaccagatgagg
aatttggactactaaaacttgagaaattagaatcttcccctgtgaatgacttggaggttt
ttgttcctagtgtgtttggagatggtgtggcttcagaggacacacaagatgcacaaatga
atccagaagaaaaaagtttcaaaagtaatttgatttcgcctttcaaaaatggattgccca
agtcacctcacttagaaagcccagcttccaagcaggaactttccacccatgaattgctgt
ttactcccatggggactgtcttagctgctgctcccactcagcctgagtctcagatttcct
catccgttttccctgtcgtgggtgcaaccccagctgttgtaccatcagtacgcagtgagg
tcttccccaacactccttctgtacctccctcacaagcgagcctgcattcctgtggaggag
catctgcccaggtcgtggatgatggggagtgcaaagactctgccattccactgcacctgg
gcagctgcggtgcagaatctgctggaaaagaggaggaacaaggtacaacatttcttctag
aagttgaaagaggtcccgataataaatctgatgaggctgtggcctgcgagaagcatcagc
agtcagagaacaaagagcagagatcctgcagagcttctcctgaacagaaaaaaggtgtag
cagaacggttgactccagtactgctcgatggcctgagagaagagagcttgcagcttgtat
caaagctaaaggattgttcaagttcctgcgctgtggatgtgagtaccatgtggtgggaag
cagctggcagcagggagctgtgtgtggtgactgcttgtgagagttctgtctccctgtgga
aacctctggcatccgaccactggggaaaggtctacacttggcagctcggagagattcctg
taatacagatcgttcctctgccggacacctgtaatctcgtgtgtatagcattgggagatt
tggagattggagaaataaggctctggctttattcttctgagaatgaatcattcaagcaat
cactggtaaaaactggaaatataaaagctgttcttgggctaaaggataggaggctggtca
gcagcagcaggactgcgcaagagcagcaagtggaaatagtatcgctttcggagacaggaa
ggagcaaggacggacagactttgatgccccctgaagaaactgttttagcttttgctgaag
tagaaggaatgagagacgccctggttggcaccactgcggtgaacagcattgttgtttgga
atttgaaaacaggccagctcctgaagaagatgcacgttggttattcctacccagcttcca
tctgccatcgagcatattccgactctggccttctgtttgttgttttaagtcacccgcatg
ccaaagagagcgagtcctgtggaaaccccgcgttccgcgtggtagcgttcaaccccaaaa
cagccaggagcacgggggtgatgttctcctccctcccacctgggcacactggaaggtacc
tggagggtgacgtgaaggacgcttctgctgcagccgtgctgacgtcaggagccatcgcgg
tgtgggacctgctgctggggcagtgcatggccctgctgcccccgggcccggaggggagct
gggcgctggcccgctgggccaccaccggtgcttgcctgctg
DBGET
integrated database retrieval system