Pelecanus crispus (Dalmatian pelican): 104036341
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Entry
104036341 CDS
T08340
Symbol
UIMC1
Name
(RefSeq) BRCA1-A complex subunit RAP80
KO
K20775
BRCA1-A complex subunit RAP80
Organism
pcri
Pelecanus crispus (Dalmatian pelican)
Pathway
pcri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104036341 (UIMC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcri03400
]
104036341 (UIMC1)
DNA repair and recombination proteins [BR:
pcri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
104036341 (UIMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAP80_UIM
UIM
Zn_ribbon_19
UIM_2
Motif
Other DBs
NCBI-GeneID:
104036341
NCBI-ProteinID:
XP_009488187
LinkDB
All DBs
Position
Unknown
AA seq
700 aa
AA seq
DB search
MPRKKKPTEGLDSRGQDGEEEEEEKRNQANAKKKRSFVDAFIVISDSDGEQESKEETGLQ
KKRTKQQLDRTKFAAKRKIAQMTEEEQFALALKMSEQEARQVNCQEEEEEELLRKAIAES
LNSCQPSDSSDVTPQLSAEALGVRGQSQPAEKEGSEILGGLALCPDAHRSKCSSHSQSAR
ADGSGQMDVARSPLVVLRRLSQEIVESSLVSSIIVSPGKGQPETRSSEKPSSLAKSDSSN
MLPSTLGDDLISLSPTFGRVTSGSWRLTPRRLFTSPSSSSEATGHKPKEQPLPCTGHSVG
EAGAGSSATLWKSWTVEQCSSLRRSGGGAGTAHTSQPGHAAKVCVSTEQAEQNEVPDSTA
ELCVLNVAEEKHKQEEARDTVHYYWGIPFCPKGVDPNQYTKVILCQLEVYQKSLKQAQRQ
LLHKKEFGNPVVPSSSLSQNELGKGDHLSRENGVADDTEDGDPDGQKESESITWLLPSKR
REAESPGHSMEEEKNSTSDDEPTTSYRQASQMLSAEDVHEDGEPMQIAQSISMLTPLGSK
RSPDTATENSAEEEISVCPETQTNPLESIEAEREELCSGSRDAPMQAGGDEDAGRTVSEC
SPTAADHVSCPLCDQGFLATEIELHAMYCNGIVGEEAGEDSPVLTRRQREARSKAASGES
GSASLDIDKTLEGRRGDSSGCWSSRRASLQVLMRGPPSLD
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggaagaagaagcccacagagggcctggactctcgaggtcaggatggggaggaa
gaggaggaagagaagaggaaccaagccaatgccaagaagaagcgcagttttgtggatgcg
tttattgttatatctgacagcgatggagagcaggagtcaaaggaagagactggattgcaa
aagaagagaacaaagcagcagctggatagaacgaagtttgctgctaaaagaaaaattgca
cagatgactgaagaggaacagtttgcactggccctgaaaatgagtgagcaagaagccaga
caagtgaactgtcaggaagaggaagaggaggagctcttgaggaaggccattgctgagagc
cttaacagctgtcagccctcggactcctctgatgtaacccctcagttgtctgcagaagca
ctgggtgtgcgaggccaaagccagcccgctgagaaagaaggctctgagatcctgggaggt
ctggcgctttgccctgacgcccatcgctccaagtgcagctcccactcacagagcgccaga
gctgatgggagtggacagatggatgtcgcccggagccccctggtagtgttgaggaggtta
agccaggaaattgttgaaagctcactagtatccagcataatcgtgtctccggggaagggc
cagcctgagacaaggtcaagtgaaaagccttcctcactagcaaaaagcgattctagtaac
atgttacccagcactcttggagacgacctcatctctttgagtcccacctttggcagggta
acttcaggctcctggcgactgacacctcggagactgttcacaagcccctccagctcttca
gaagcaacaggccacaaaccaaaagagcagcccctgccctgcactggccattctgtggga
gaagctggtgccgggagctcagccacgctctggaagagctggaccgtggaacagtgtagc
agcctcaggaggagtggtggaggagcaggtaccgcacacacctcgcagcccgggcatgcc
gccaaagtctgtgtttccacagagcaagcagagcagaacgaggtgcccgacagtaccgct
gagctttgcgtgctgaatgtggcagaggaaaagcacaagcaggaggaggcgagagacaca
gtgcactattactggggcattcccttctgccccaagggggtggaccccaaccagtacacc
aaagtcatcttgtgtcagctggaggtttaccagaagagcctgaagcaggctcagaggcag
ctattgcataagaaagagtttggtaacccagttgtgcccagttcttccttgagccaaaat
gagcttgggaaaggagatcacctaagcagggagaacggggttgctgatgatacagaagat
ggagacccagacgggcagaaggagtctgagagcatcacctggctcctcccttcaaagagg
agggaggcagagagtccagggcacagcatggaagaagagaagaactctacttctgatgat
gaaccgaccaccagctaccgccaggcctcccagatgctgtctgcagaggatgtgcatgaa
gatggggaacccatgcaaattgcacagagcatctccatgttgaccccacttggcagtaaa
aggagcccagatactgctacagaaaactctgctgaagaagagatctctgtttgcccagag
acccagacgaatccactggaatctattgaggcagagagagaagagctctgttcgggcagc
agagatgcacctatgcaggctggtggagatgaagatgctggcaggactgtgtctgagtgc
agtcctacagctgctgaccatgtgtcgtgcccgctgtgtgaccaaggctttctagctaca
gagatcgagctgcatgccatgtactgcaacggcattgtgggagaggaggctggcgaggac
agtccagtgctcacccggcgtcagagagaggcaagaagtaaagctgccagtggtgaaagc
ggctcagcatccttagacattgacaagacgttggaaggcaggagaggggactcctcagga
tgctggagctctcggagagcaagtctgcaggtgctgatgcggggacccccctccctggac
tag
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