Pelecanus crispus (Dalmatian pelican): 104036546
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Entry
104036546 CDS
T08340
Symbol
ABCA1
Name
(RefSeq) ATP-binding cassette sub-family A member 1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
pcri
Pelecanus crispus (Dalmatian pelican)
Pathway
pcri02010
ABC transporters
pcri04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pcri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104036546 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104036546 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcri02000
]
104036546 (ABCA1)
Transporters [BR:
pcri02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
104036546 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
104036546
NCBI-ProteinID:
XP_009488474
LinkDB
All DBs
Position
Unknown
AA seq
1820 aa
AA seq
DB search
TLLNSKALWDRHLPASNWTVEDVARFLSNHLEDFETANGSVYTWVDAFNETDRAIQTISR
FMECVNLDKLEPVATEVRLINKSLELLDERRFWAGIVFTEIAPTSAELPQHVKYKIRMDI
DNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDVVEQAIIRVQTGTEKKTGVYVQ
QMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIVYEKEARLKETMRIMGLDNGI
LWLSWFISSLIPLLMSAGLLVLILKMGNLLPYSDPSVVFVFLSIFGVVTILQCFLISTVF
SRANLAAACGGIVYFTLYLPYVLCVAWQDYVSFSLKILASLLSPVAFGFGCEYFALFEEQ
GVGVQWDNFFESPLEEDGFSITTSAVMMLFDTFLYGVMTWYIESVFPGQYGIPRPWYFPF
TKSYWFGEEQQDRQHPHPDQKGPSEVCKEEEPVHLSLGVSIQNLVKVYRDGKKVAVDGLT
LNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAFILGKDIRSHLSTIRQNLGVCPQ
HNVLFDLLTVEEHIWFYARLKGLPEKKVKEEMEQMAMDVGLPHKLKARTSKLSGGMQRKL
SVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQGRTIILSTHHMDEADILGDRI
AIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSLSSCRNSSSTVSYLKKDDSVSQS
SSDAGLGSDHESDTLTIDVSVISNLITKHVPEARLVEDIGHELTYVLPYKAAKEGAFVEL
FHEIDDRLSDLGISSYGISETTLEEIFLKVADDSGVDAETSDGTLPARRNRRVFGDRQSC
LRPFTEDDAFDPNDSDIDPESRETDLLSGVDGKGSYQMKGWKLTRQQFMALLWKRLLIAK
RSRKGFFAQIVLPAVFVCIALMFSLIVPPFGKYPSLELHPWMYDEQYTFISNDAPEDAGT
QRLLDALLNKPGFGTRCMQGHSIPDTPCTVGQREWTTASVPDSVLDIFLKGNWSMENPSP
SCECSNEKIKKMLPVCPPGAGGLPPPQREQDTADILQNLTGRNVSDYLVKTYVQIIGKSL
KNKIWVNEFRYGGFSLGASSSLMLPPSHEVTGAIKQVKKILELAQGSSGDRFLNSLSSFM
KGLDTKNNVKVWFNNKGWHAIASFLNVINNAILRANLQQGKNPSAYGITAFNHPLNLTKQ
QLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHLQFISGVKPVIYWLA
NFVWDMCNYIVPATLVIIIFICFQQKSYVSSSNLPVLALLLFLYGWSITPLMYPASFVFK
IPSTAYVVLTSMNLFIGINGSVATFVLELFTNNKLNNINDILKSVFLIFPHFCLGRGLID
MVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEGVVFFLITVLIQYRFFIKPRPV
YAKLPPVNDEDEDVSRERQRIISGGGQSDILEIKELTKIYRMKRKPAVDRICVGIPPGEC
FGLLGVNGAGKSSTFKMLTGDTDVTGGEAFLKGNSILSNIQEVHQNMGYCPQFDAVNELL
TGREHLEFFALLRGVPEKEVCKVGEWAIRKLGLVKYGEKYAGNYSGGNRRKLSTAIALIG
GPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGRSVVLTSHSMEECEALCTRMAIMVNGR
FRCLGSVQHLKNRFGDGYTIVVRIAGANPDLKPVEEFFGHAFPGSVLKEKHRNMLQYQLP
SSLSSLARIFSILSQNKKRLHIEDYSVSQTTLDQVFVNFAKDQSDDDHTKDLSLHKNQTV
VDIAILNSFLQDEKVKESCV
NT seq
5463 nt
NT seq
+upstream
nt +downstream
nt
acgctgctgaacagcaaagctctctgggaccggcacttgccagcttccaactggacagtg
gaggacgttgcccgtttcctgtcaaaccatctggaggactttgagacagcaaatggctca
gtatatacctgggtggatgccttcaatgagaccgaccgggctatccagaccatctcccgc
ttcatggagtgtgtcaacttggacaaactggagcctgtggccacagaagtccggcttata
aacaaatcattggagcttctggatgaaaggaggttctgggctggcatagtcttcactgaa
atagctcctaccagtgcagagctccctcagcatgtgaaatacaagatacgcatggacatt
gataatgtggaaaggaccaacaagatcaaggatgggtactgggatcctggtcctcgtgct
gatccctttgaggacatgcgctatgtttggggaggctttgcctacctgcaggatgtagtg
gaacaggccatcatcagggtgcagacaggcacggagaagaagacaggagtttacgtgcag
cagatgccctatccgtgttacgtggatgacatatttctgcgggtcatgagccgctccatg
cctctcttcatgactctagcctggatctactcagtggctgtgataattaagggcattgtg
tatgagaaggaagcccgactgaaggagacgatgaggattatgggacttgacaatggcatc
ctttggctaagctggttcattagcagcctcatccctctcctgatgagtgcaggcctgctg
gtgctgatccttaagatggggaatctgctgccttacagcgaccctagcgtggtgtttgtt
ttcctttcgatcttcggtgttgtgaccatcctccagtgcttcctcatcagcaccgtgttc
tccagggccaacctggcagctgcctgtgggggcattgtctatttcacgctgtacctgcct
tatgtgctgtgtgttgcctggcaggactatgtcagcttctcactcaagatcttggcgagc
ctgctgtctccagtagcctttggctttggttgtgagtactttgcactgtttgaggaacag
ggagttggtgttcagtgggacaacttctttgagagcccactggaagaagatggctttagc
atcaccacatcagccgtcatgatgttgttcgacaccttcctatatggggtcatgacctgg
tacattgagtctgtcttcccaggccagtatgggattcccaggccctggtactttcctttc
acaaagtcctattggtttggtgaggaacaacaggacaggcagcaccctcatcctgaccag
aaggggccttcggaagtctgcaaggaggaagaacctgtgcatctgagccttggtgtttcc
atccagaacctggtcaaggtttatcgtgatggcaagaaggttgctgtagatggtctcaca
ctgaacttctatgaaggacaaatcacctcgtttctgggacataatggagcagggaaaacc
actaccatgtccatcttgactggcttgttccccccaacctcgggtacagccttcatcctg
ggcaaagatatccgctctcacctcagcaccatcaggcagaacctgggtgtctgtccgcaa
cacaatgtgctgtttgacttgctgactgtggaggagcacatctggttctacgctcggctc
aaagggctgccggaaaagaaggtgaaagaggagatggagcagatggcaatggatgtcggt
ttgcctcacaaactgaaagctaggacaagcaaactctctggtggcatgcagaggaaactc
tcagttgccttagcatttgttggtggctccaaggttgtcattctggatgagcctacagct
ggggtggatccttattctcgcagagggatatgggaattgctcctgaagtatcggcaaggc
cgcactatcattctctccacgcaccacatggatgaggcagacattctgggggaccggatt
gccatcatttctcatggcaaactctgctgtgttggctcttctctcttcctgaagaaccag
ctgggaacaggctattatttgaccctagtcaagaaggatgtggattcctctctgagctct
tgccgaaatagcagcagcacagtgtcctatctgaaaaaggacgatagtgtctcccagagc
agctctgacgctggccttggcagtgaccatgaaagtgacacactgacaatagatgtgtct
gtaatttcaaatctcattacaaaacatgttcctgaggccaggctggtggaggacatcggc
catgaattaacctatgtcttgccatacaaggctgctaaagagggagctttcgtggagctg
ttccatgaaattgatgaccgtctctctgatcttggcatttccagctacgggatctctgaa
actaccctggaggagatcttcctgaaagtggctgatgatagcggtgtggatgcagaaact
tcagacgggacgttgccagccagaaggaacaggcgtgtgtttggagacagacagagctgc
cttcgtccttttacagaagatgatgcatttgatcctaatgattcagacatagatccagag
tccagagagacagaccttctcagtggcgtggatgggaaaggatcgtaccagatgaagggc
tggaaactcacccggcagcagtttatggctttgttgtggaagaggctgcttattgccaag
agaagccggaagggcttctttgctcagattgtgctgccagctgtctttgtgtgtattgct
ctcatgttcagcctgatcgttcctccctttgggaagtatcccagcctggaattacacccc
tggatgtatgatgaacagtacacttttattagcaatgatgctccagaagatgcaggcact
cagaggcttttggatgcccttctcaataaacctggttttgggacacgctgtatgcaggga
cactccatcccagacactccttgcaccgtggggcagagggaatggaccactgcttcagtc
ccagactcagtcctggacatcttcttaaaaggcaactggagcatggagaacccttcccca
tcttgcgagtgcagcaatgagaagatcaagaagatgctccctgtgtgcccacctggtgca
ggcgggctgccacccccacagcgcgagcaagacactgctgacatcctccagaatctgaca
ggccgcaatgtatcggactacctcgtgaagacctacgtgcagatcattgggaaaagctta
aagaataagatctgggtgaatgagttcaggtacggtggcttttccttgggagccagcagt
tccctcatgcttcctccaagccatgaagtcactggtgccattaaacaggtgaagaaaatc
ttggagttagcacaggggagttctggagaccggtttctcaacagcttgtcaagtttcatg
aaaggcctggatacaaagaacaatgtgaaggtgtggttcaacaacaagggctggcatgcc
atcgcctccttcctgaatgtgatcaacaatgctatccttcgggccaacctgcagcagggc
aaaaaccctagtgcttacgggatcactgccttcaatcacccacttaacctcaccaagcaa
cagctctctgaagtggcactgatgactacctctgtggatgtcctagtctccatctgtgtg
atctttgccatgtcctttgttcctgccagctttgtggttttccttatccaggaacgtgtc
agcaaggctaaacacttgcagttcatcagtggtgtgaagcctgtgatctactggctggcc
aactttgtctgggatatgtgcaactacattgttccagcaacgctagtcatcatcatcttc
atctgcttccagcagaagtcctatgtatcctcttccaacttgcctgtgctggctctcctt
ctgtttctctatgggtggtccatcacccctctcatgtatccagcctccttcgtgttcaaa
atccccagcacagcatatgttgtgctgaccagcatgaacctcttcattggcatcaatggt
agtgtggccaccttcgtcctggagctcttcaccaacaacaagctgaataacatcaatgac
atcctgaagtctgtcttcctcatcttcccccacttctgcctggggcggggactcattgac
atggtgaaaaaccaggccatggctgatgctctggagaggtttggagaaaatcgttttgtg
tcccctctgtcatgggacctggtgggaaggaacctctttgccatggcagtagagggtgtt
gtcttcttcctcatcacagtgctcatccagtacaggttcttcatcaaacccaggcctgtc
tatgccaagctgcctcctgtgaatgatgaagatgaggatgtatccagagagagacagagg
atcattagcggaggaggacagagtgacatcttggaaatcaaggagctaaccaagatttac
agaatgaagcgaaagccggcagttgataggatctgtgttggaataccccctggagagtgc
tttggactcctgggagtaaatggtgctggcaagtcatccacttttaagatgctaactggt
gatacagatgtgacaggaggagaagctttcctcaaaggaaacagtatcttgtccaacatc
caagaagtccatcagaacatgggatactgtccacagtttgatgctgttaatgaactgctg
acagggcgagagcacttggagttctttgcgctcctgagaggtgttccagagaaagaagtc
tgcaaggtcggtgagtgggcaattcggaaactgggccttgtgaaatacggagaaaaatat
gctgggaattacagcggtgggaacaggcgcaagctctccacagccattgccctcattgga
gggccacctgtggtgttcctggatgagccaacaacagggatggatcccaaagcacgtcgt
ttcttgtggaactgtgctctaagtgtaatcaaagaggggagatcagtggtcctcacatct
cacagcatggaagaatgcgaagccctgtgcactcgaatggcgataatggtcaatgggcga
ttcaggtgtctgggcagcgtccagcatctaaagaacaggtttggagatggttacaccata
gtggtgagaattgcaggggcaaacccagacctgaagcctgttgaggagttctttgggcat
gccttccctggaagtgtcctgaaggaaaagcatcggaatatgctgcagtaccagcttcct
tcttcactatcctccctggccagaatattcagtattctttcccagaacaaaaagagactc
cacatagaagactactccgtatctcagaccacacttgaccaagtctttgtaaattttgct
aaggaccaaagcgacgacgaccacactaaggacctgtcattgcacaaaaaccagactgtg
gtagatattgcaatccttaattccttcctgcaagatgagaaggtaaaagaaagttgtgtg
tga
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