Pelecanus crispus (Dalmatian pelican): 104037146
Help
Entry
104037146 CDS
T08340
Symbol
PDCD11
Name
(RefSeq) protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
pcri
Pelecanus crispus (Dalmatian pelican)
Brite
KEGG Orthology (KO) [BR:
pcri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcri03009
]
104037146 (PDCD11)
Ribosome biogenesis [BR:
pcri03009
]
Eukaryotic type
90S particles
Other 90S particles
104037146 (PDCD11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP5
S1
Spt6_S1
HAT_Syf1_CNRKL1_N
OB_RRP5_4th
HAT_PRP39_N
Suf
HAT_PRP39_C
TPR_14
OB_RRP5
HAT_Syf1_CNRKL1_C
TPR_19
TPR_15
TPR_12
ARM_TT21
ARM_TT21_5th
TPR_CcmH_CycH
Motif
Other DBs
NCBI-GeneID:
104037146
NCBI-ProteinID:
XP_009489276
LinkDB
All DBs
Position
Unknown
AA seq
1838 aa
AA seq
DB search
MASMEENFPRGGIQKKPTEGKTSNPKLERDNLFDIHHEEQSQKRKRSQRDQGKQKKFKAD
KIAAAKDSVVNIEPLTVEALCEGMLLLGCIKEVSDYELVISLPNGLSGFVPVTQISDAYS
KMLSEQVAQGELLEDLNSLPDMYSPGTLVRCIVTSVEKSADGRRSIKLSIDPKKVNKGLN
ASALASGMLLSGFVSSVEDHGYLIDIGVSGTHAFLPRQKAQNYIKAVKRGPDLKIGQNLN
CVIVEVKNEGRVVRLSIDRSEVAASLATEQQNWTLSNLLPGLVVKARVQKVAPLGIKVSF
LSSFTGIVDFMHMDPEKSMNYSPDQVMKACILSIHPASKVVRLTLRQAFLHPGGSPNQLS
NDRMGAVVEESTVKAFYKQFGAVFELDDGTLAFARLKHLSKNRKSFKPAAFKTGCKHKCR
IIDYSLMDEMCIVSLKYQIIEAWFLQYQDIHTGDVVQGKVFALKSIGMQVKVTDGIKGLV
PSVHLADVILKQPEKKYNIGDEVRCRVLECNPAGRKLILTLKKSLVQSKLPVLSNYEDAK
PGLITHGFVVCAREFGCIVKFYNDVKGLVPKNELSSEPISCPDKVFHEGQVVKVVVLKCE
PQQERLLLSFRLSSKPAPENKKECTPKKKQEVKYQIGQMVDVKVLKKKDNGLEVSVLEDE
GNVIALIPTVHLSDFVANCKLLWHCLQEGDVLPRVMCLSDKGERIILSRKSAVISAVQEE
QVVRSFPEIQPGMLLTGYVRNVMPFGVFVEFPFGVKGLAPKVNMSDKFVTDTKDHFVVGQ
TVIAKVMSTDEEKQRVLLNLKVSECSSGDSAAESFALLNQYFKEMKEIRNLLRRRGEPSM
AQGLCELVPGKELQLVVQDVKEDGSALFSGSCVTGLTVTATRYHLGDKNIVPGEKTKALV
LHVDALTSKVYVSLRDELLKQRAKQRLTENSQNSAIVQHIAEEFAIVSLLETGQLAAIPI
ASHFNDTFRFDSEKLKVGQTISATLKIAEVNDHGVLLAVQGPAKKNVFVRVRNESETALE
ETLAPVKHSLSLGDIVTGTVKSIKPTHVTVAIDEKLTGSIHASRILDEVPIGSFPTYTLK
AGQKVTARVIGGRDVNTHRYLPITHPHFTRSVPELSIRPSEIEGKVTAMLNLKEDSVLKK
LGLYSVGQTVTCFVKKYNILKNWLEVEVAPDIRGRVPHLLLSLNTKVLKHPEKSFKNGQA
ISATVTGTDVTETNLCLSLTGIQSLEQGATTVGIVTKVTPHIGLTITLPGGKTGKVSIFH
LNDTYTENPLGDFKVGKIVRCYILSNKNGKIQLSLRQSRLNPKSNSKVEDVEITCIKDVK
KGQLVRGYVKSITQSGVFFGLSTSLLGRILFQNVSPYFVQKHSLYEKYLPEGKLLTAKVL
GVNGKEKHIELSLLPEDTGMPSVLPESLGLPRYDAEEEKREADDREKREELQLKTKRRRG
NSESEQEAKPKKRKICPADENDSGIEVYYREEEDDDQEEEAAKKKSKIKKPGEAPRLQVS
MGFTWDEDMNAVDIPVLNQKEESSESEEEEDLQSKLKKQTKKEKELEKQKKEKELCKLEA
ALMDPSRQPQSADDFDRLVLSSPNSSILWLQYMAFHLQATEIEKARAVAERALKTICFRE
EQEKLNVWVALLNLENLYGTEETLMKVFERAVQYNEPLKVFQHLCDIYANSEKYKQAEDL
YHTMLKRFRQEKSVWLKYASFLLKQGQTEATHRLLERALKALPTKEHVDVISRFAQLEFR
FGDPEHAKALFESTLNSYPKRTDIWSIYMDIMIKHGSQKEVRDIFERVIHLSLAPKKMKF
FFKRYLDYEKKFGTTESVLAVKRAALEYVETKSSLADT
NT seq
5517 nt
NT seq
+upstream
nt +downstream
nt
atggcatccatggaagaaaactttcctcgagggggcatccagaaaaaacccacagaggga
aaaacttccaatccaaagttagagcgggacaatttgtttgatattcaccatgaagaacaa
tcccagaaaagaaaaaggagccaaagggatcaaggaaagcagaaaaagttcaaggcagac
aaaatagctgctgctaaagacagtgttgtaaatattgaaccactcacagttgaggcactc
tgtgaggggatgctgcttcttggttgtataaaagaggtcagtgactacgagctagtcatc
agcttgcccaacggactttcaggatttgtgccagtcacgcagatcagtgatgcctacagc
aaaatgctgagtgagcaggtggcccaaggagaactcctggaggacttgaattcactgcca
gacatgtattctccagggacactggtcaggtgcattgtaaccagtgtggagaaaagtgct
gatggacgtcggagtatcaaattatcgatcgaccccaagaaggtcaataagggtctgaac
gcttcagcactagcatcaggcatgctgctctctggctttgtgtctagtgtggaagaccat
ggctacctcattgatattggagtcagtggaactcatgctttcctgcctcgtcagaaagcc
caaaattacatcaaagcagtcaagagagggcctgacttgaaaataggccagaacctgaac
tgtgtcattgtggaagtaaagaatgagggaagagtggtccgtttgtccattgatcgatca
gaggttgctgcatcccttgcaacagagcaacagaactggacgctctctaatttattacca
gggctggtggtgaaagctcgagtgcagaaggtggccccacttgggatcaaagtgagcttt
ctgtcttccttcactggcattgtggatttcatgcacatggacccagagaaatccatgaac
tattctccagatcaagtgatgaaagcctgcatcctctctatccaccctgcctcgaaggtg
gtgcggcttactctacggcaggccttcctccaccctgggggatccccaaaccagctctcc
aatgatcgtatgggggcagtggtggaggagtcgacagtgaaagctttctataagcagttt
ggtgctgtctttgagcttgatgatgggactcttgcatttgcacggttgaaacatctttca
aaaaacagaaaatcttttaaacctgcggcatttaagacaggatgcaaacataaatgtcgg
atcattgactacagcctgatggatgagatgtgtattgtatctctgaagtatcagattatt
gaagcgtggtttctgcaataccaagatatccacacaggggatgtggtgcagggcaaagtg
tttgcattgaaatccattgggatgcaggtgaaagtgactgatggaattaaagggcttgtg
ccatccgtgcatctcgctgatgtgatcctgaagcagcctgagaagaagtacaacatagga
gatgaagtcaggtgtcgggtgctagagtgcaatcctgcaggaaggaagctgatccttact
ctaaagaaaagtcttgtccaatcaaagcttccagtcctctccaattatgaagatgcaaaa
ccaggtctgatcacacatggctttgtggtgtgtgcaagggagtttggctgcattgtgaag
ttctacaatgatgtcaaaggtctggtaccgaagaatgagctgagctcagaacccatatct
tgtccggataaagtcttccatgaaggccaggttgttaaagtagtggtcttaaaatgtgag
ccccagcaggaaagactcttgttgtccttcaggttatcaagcaagcctgccccagagaac
aaaaaggaatgtactccaaagaagaaacaggaagtgaaatatcaaataggacagatggtt
gatgtgaaagtcttgaagaagaaagataatgggctagaggtttctgtcttagaagatgaa
ggcaatgtaatagccttgattcccacagtgcacctctctgactttgttgctaactgtaag
ctcctgtggcattgtcttcaagagggagatgtcttgcccagagttatgtgcctaagtgac
aagggagagcgtatcatcttgagcagaaagtctgcagtgatttctgctgtacaggaggag
caagttgtgagaagtttccctgaaatccagcctgggatgctgttgactggttacgtgagg
aatgtgatgccctttggagtatttgtggagttcccttttggtgtgaaaggactggcgccc
aaagtgaacatgagtgacaagtttgtgacggacaccaaggaccactttgtggtgggacag
actgtgattgcaaaggtgatgagcactgatgaggagaagcagcgtgtgctcctcaatctg
aaggtgtcagagtgcagctcaggcgattctgctgcagagagctttgccctgctgaatcaa
tatttcaaggagatgaaagaaatcaggaacttgttgagaagaagaggggagcccagcatg
gcccaaggcctttgtgagttggtgcctgggaaggagctgcagctggtcgtgcaggatgtg
aaggaggatggctcagcactgttcagtggcagctgtgtcacaggcttgactgtaacagcc
actcgctaccatttgggagacaaaaatattgttcctggtgagaaaaccaaggcattggtt
cttcatgtggatgccctcacatccaaggtgtatgtttctcttcgggatgaactgttaaaa
caaagagccaagcaacggctcacagagaactcccagaattctgccatcgtgcagcacata
gcagaagagtttgccatcgtgtctttgttggaaacaggccagctggcagctatccccata
gcctctcacttcaatgacaccttccgctttgactcagaaaaactgaaggtgggacaaaca
atctctgcaaccttaaaaatagcggaggtgaatgaccatggagtcttgttagcagtacaa
ggcccagcaaagaagaatgtttttgtaagggtccggaacgaatctgagacagcattagaa
gagacgcttgctcctgtgaaacactcactttcgctgggggatattgttactggtactgtt
aaatccatcaagccaacccatgtcacagttgctattgatgaaaagctgacaggttcaatc
catgcatcccggattctggatgaagtgcccataggctcttttccaacgtatactctgaaa
gctggacagaaggtgactgcccgagtcattggaggcagagatgtgaatactcacaggtac
ctgcccatcacccatccgcacttcacacggtctgttccagagctcagcattcgcccaagc
gaaatagaagggaaagtcacagcaatgctgaaccttaaagaagacagtgtcctcaagaaa
cttggactctacagtgttggacagacagttacctgttttgtgaaaaagtataacatcctc
aaaaattggctggaggtagaagttgcccctgacatacgaggaagggttcctcatctgctg
ctgtctctgaacaccaaggtcttaaagcatccagaaaagagcttcaaaaatggccaggca
atatcagctacagtgactggaacagatgtcactgaaacaaacctctgcttgtcactcaca
ggaattcagtcactggagcagggcgctaccactgtaggcattgtaacaaaagtgactcca
cacattggtttgaccattacactgccaggtgggaagactggcaaagtcagcatctttcac
ttgaatgatacttacacagagaatcctctgggtgacttcaaagttggcaagattgtcagg
tgttacatcctctccaacaagaatggcaaaatccagttatctctccggcaatcccggcta
aacccaaagagcaacagcaaggtggaggatgttgaaataacatgtattaaggatgttaaa
aaaggccagctagtgagaggctatgtcaaatcaatcactcagtcaggtgtattctttggc
ttgtccacttctcttctgggccgaattctgttccagaatgtttccccttactttgtacag
aaacactccttatatgaaaagtacctgcctgaaggaaagctgctcactgccaaggtgctt
ggtgtaaatggaaaagaaaaacatattgagctctctctcctgcctgaggacactgggatg
ccaagcgtcttgcctgaatccctaggcctaccacgatatgatgcagaggaagagaaaaga
gaggcagatgatagggaaaagagagaagaacttcagctgaagacaaaacggagaagagga
aactctgaaagtgagcaggaggctaagccgaaaaagaggaagatttgcccagcagatgaa
aatgacagtggaattgaggtatattaccgggaggaagaggatgatgaccaggaggaagag
gcagctaaaaagaaatctaagataaagaaacctggtgaagctcccaggctgcaggtttcc
atgggtttcacctgggatgaggacatgaatgcagtggatatacctgtgctgaatcagaag
gaagagagctcagagagcgaggaggaggaggatctgcagtcgaagctgaagaaacaaaca
aagaaggagaaggaactagagaagcagaagaaggagaaggagctttgcaaattagaggca
gccctgatggaccccagtcgacagccccagtcagcagatgactttgaccgcctggtgctg
agcagtcccaacagctccatcctctggctacagtacatggctttccacctccaggctact
gagattgagaaggctagagctgtggcagagagagcacttaaaacaatctgtttcagggaa
gaacaggagaagctgaatgtctgggtagctctgctgaacttggagaacttgtatggtact
gaggagacattgatgaaggtgtttgagagagctgttcaatacaacgaacctttgaaagtc
ttccagcacctgtgtgacatctatgccaattctgagaagtacaagcaagcagaagatttg
taccacacaatgctgaagcgtttccgtcaggagaaatctgtgtggctgaagtacgcctct
ttcctcctgaagcaaggccagactgaagctacacacaggcttttggagcgtgctctcaag
gctttgcccaccaaagaacatgtggatgtaatttcaaggtttgcacagctggagttccgt
tttggggacccagaacatgccaaggccctctttgagagcaccctcaacagctaccccaag
cggacagacatctggtccatctacatggacatcatgatcaaacatggcagccagaaggaa
gtacgggacatctttgagagagtcatacacctgagcttggcaccaaagaagatgaaattc
ttctttaaacgctacctggattatgagaagaaatttggtacaacagaaagtgtcctggct
gttaaaagagcagcacttgagtatgtggagaccaagagttcccttgctgacacctaa
DBGET
integrated database retrieval system
