Pelecanus crispus (Dalmatian pelican): 104037531
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Entry
104037531 CDS
T08340
Symbol
RC3H1
Name
(RefSeq) roquin-1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
pcri
Pelecanus crispus (Dalmatian pelican)
Brite
KEGG Orthology (KO) [BR:
pcri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcri03000
]
104037531 (RC3H1)
04121 Ubiquitin system [BR:
pcri04121
]
104037531 (RC3H1)
Transcription factors [BR:
pcri03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
104037531 (RC3H1)
Ubiquitin system [BR:
pcri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104037531 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-CCCH_UNK
zf-C3HC4_2
zf_CCCH_4
FYVE
zf-CCCH_4
Vesi_VP2
PaaA_PaaC
Baculo_IE-1
zf-RING_4
zf-RING_10
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
104037531
NCBI-ProteinID:
XP_009489793
LinkDB
All DBs
Position
Unknown
AA seq
1115 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPITLCSGAEDTKHYEEGKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGTDQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSGAILSEE
GGVDLPSRKTSALPNGIVSTGSTVTQLISRGTDSSYETALKPGKMDHLSSSAPGSPPDLL
ESVPKSSISALPVNPHPVPARAPTDLPSVSVTKQLQMVPRGSQLYNTQQADMFYQDPRGA
APPFEPAPYQQGVYYPTQSMSRFVRPPPSAPEPGPPYLDHYPPYLQDRVVSPQYTQPQQY
PPMGQPIYPPHYDSRRVYPPVQPYQREEIVRGSPVPIDIPQAAVPSYVPESRDRYQQTEG
YCPVAPHLSQIRPSCHRPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSPTLPHPFHSE
EYLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAARSVEMANVDSKAMR
DQRLDMQRRAAETGDDDLIPFGDRPTVSRFGAISRTSKAMYQNSGPMQAMAVQGATTKSI
ISDYNPYGTHGGWGGSPYSPHQNIPSQGRFNDRERLSMSDVAGHGKQLPSAEREQQLRME
LQQVDHQISQQTQMRGLEREATTLAGQPQPPPPPPKWPGMISSEQLSLELHQVEREIGKR
TRELSMESQSSLDIKTKLGTTKQTENGQLEPQSKVPAEDLALTFSSDVPNGSALTQENIG
LLSNKTASLSLSEDPEGGGDNHDSQRAGVTPTSAP
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacaatggacggattttctctcctgcccgatttgcacacagact
ttcgacgaaacaatccggaagcccatcagcttgggttgtggccacactgtctgcaagatg
tgcctcaacaagctccaccgtaaggcatgcccttttgaccagaccactatcaatacagac
attgaactccttcctgtgaactcagccttactgcaactagtgggtgctcaggttcctgag
cagcagccaattactttatgtagtggagctgaagataccaagcattacgaggagggcaag
aaatgcgtggaagaactagcattgtacctcaaaccactcagcagtgcgagaggtgtgggt
cttaacagtactactcagagcgtcctaagccgccccatgcaaaggaaacttgtgacctta
gttcattgccagctagtggaggaagaagggcggataagagccatgcgtgcagcgcggtcg
cttggtgaaagaacagtcacagagctcattcttcaacatcaaaatcctcagcagctctct
tccaacctctgggctgcagtgagagccagagggtgccagttccttggaccagcaatgcaa
gaggaggctttaaagctggttctgctggctctggaagatggatctgctttgtcaagaaag
gtcttggttctgtttgtggttcagaggctggagccgcgatttcctcaggcttctaaaact
agcattgggcatgttgtccagcttctttacagagcttcgtgcttcaaggtgacaaagcga
gatgaggattcctccctgatgcaactgaaggaggaatttcgcacttatgaggctctgaga
agggaacatgattcccagatagttcaaattgctatggaagcaggtttacgcattgcacca
gatcagtggtcctcactgttatacggagaccagtctcacaaatcccacatgcagtctatc
attgacaagttgcagaccccagcctcgtttgcacagagtgttcaggaattgactattgct
cttcagaggactggagatccggctaacctgaatcgtcttcgacctcacctagagctcctg
gcaaatattgatcccagtccagatgctccacctccgacgtgggaacaactggagaatgga
ctagttgctgtgaggactgtggttcatggcttagttgattatatccagaatcacagcaag
aaaggaacagatcagcaacagcctcctcagcacagcaagtacaagacatacatgtgccgg
gacatgaaacagcgaggagggtgcccccgaggggctagctgcacctttgcacattcacag
gaggagctagaaaaattccgtaaaatgaacaagcgtctggttcctagaagacccctgagt
gcctccctgggccagctaaatgaggtgggcctgccttcaggagctatcctctcagaggaa
gggggagtggacttgcccagtaggaaaacttctgctctgccaaatggaattgtgtcaaca
ggcagcacggtgacgcaacttatttctcgagggactgactccagttacgaaactgctctg
aagccagggaagatggaccatctgagtagcagtgcccctggatcccctcctgacttgctg
gagtctgtccccaagagttctatttctgcattaccagtgaaccctcatcctgtgcctgct
cgggcaccaacagatctgccttcagtgtctgtcaccaagcagttgcaaatggtaccacga
gggtctcagttgtataatactcagcaagcagatatgttttatcaggatcctagaggagct
gccccaccatttgagccagcaccctaccaacaaggagtttactatcccactcaatccatg
tctcgctttgttcgacctcctccatcagctcctgaacctggtccgccttatttagaccat
tacccaccctaccttcaggatcgtgtggtgagcccacagtacacgcagccgcagcagtat
cctcctatgggacaacccatatacccaccgcactatgacagccgtcgtgtatatccccct
gtccagccatatcagcgagaggagattgtccgaggaagccctgtacccattgatattcca
caagcagctgtaccttcctacgtacctgaatccagagacagataccagcaaacagagggt
tattgcccagtggctccacatctcagtcagatcagaccttcgtgccacaggccgcatccc
agtctggatgaacttcaccgacgacgaaaagagatcatggcccagctagaagaaaggaag
gtgatttctccacctccctttgcaccgtcaccaaccttgcctcatccttttcattcagag
gagtacttggatgaagacctgaaggtagctgggaaatacaaaggaaatgactatagccag
tattctccctggtcctgtgacaccatcggctcctacattggaaccaaagatgcaaaaccc
aaagatgttgtggcagcaaggagtgtggagatggcgaatgtagatagtaaagccatgcgt
gaccagcgattagacatgcagcgaagagcagcagagactggtgatgatgacctcattcca
tttggagaccgaccaactgtgtcgagatttggggctatctctcgtacttccaaagcgatg
taccagaattctggtcccatgcaggccatggcagttcagggagctaccaccaaatcaatc
atttcagactacaatccttacggaactcatggtggctggggaggctctccatattctcct
catcaaaatataccttctcagggacgtttcaacgacagggagagactgtccatgtcagat
gtggctggtcatgggaaacagttgccctcagcggagcgagagcagcagctgcgcatggag
ctgcagcaagtagaccatcagattagccagcagacacaaatgcgaggactagagagggag
gcgactaccctggcaggccagccacagcccccacccccacctcccaagtggcctgggatg
atctcaagtgaacagctgagcttggagctacaccaggtggaaagggaaattgggaagaga
acccgtgagctgagcatggagagccagtcttcactggatataaaaaccaaactgggcacc
actaaacagacagaaaatggacaattagaaccacaaagcaaggttccagctgaggacctc
gcactgacattcagcagtgatgttccaaatggatcagccttgacacaagagaacatcggc
ctcctgtcaaacaagacggcctctctcagcctgtcagaggacccagagggagggggagac
aaccatgactcccagagagcgggagttacgcccacgtctgctccatga
DBGET
integrated database retrieval system
